TCONS_00040189 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040189
Unique NameTCONS_00040189
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length173

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040189 ID=TCONS_00040189|Name=TCONS_00040189|organism=Clytia hemisphaerica|type=transcript|length=173bp
NAAAATTTGAGAGAGTGTGCTCCTGCCCTTCCGGAAACCGTTTTGGTTTC
TCCTAAGGAGGGGGTCAAGAATAGGAACAATACGgttaaataaaagtttg
ttataAAATTTTGCGGCAATTGGCATCAAGGTGATACCTCTGTAGTTTGA
GGCTAAGGTCAGATCACCTTTTT
Run BLAST on NCBI

transcript from alignment at sc0002348:23122..23294

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040189 ID=TCONS_00040189|Name=TCONS_00040189|organism=Clytia hemisphaerica|type=transcript|length=173bp|location=Sequence derived from alignment at sc0002348:23122..23294 (Clytia hemisphaerica)
AAAAAGGTGATCTGACCTTAGCCTCAAACTACAGAGGTATCACCTTGATG
CCAATTGCCGCAAAATTTtataacaaacttttatttaacCGTATTGTTCC
TATTCTTGACCCCCTCCTTAGGAGAAACCAAAACGGTTTCCGGAAGGGCA
GGAGCACACTCTCTCAAATTTTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024388XLOC_024388Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040189-exon-sc0002348-1491911889:23122..23294TCONS_00040189-exon-sc0002348-1491911889:23122..23294Clytia hemisphaericaexon
TCONS_00040189-exon-sc0002348-1510915933:23122..23294TCONS_00040189-exon-sc0002348-1510915933:23122..23294Clytia hemisphaericaexon
TCONS_00040189-exon-sc0002348-1575043694:23122..23294TCONS_00040189-exon-sc0002348-1575043694:23122..23294Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002348supercontigsc0002348:23122..23294 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040189 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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