|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040184 ID=TCONS_00040184|Name=TCONS_00040184|organism=Clytia hemisphaerica|type=transcript|length=346bp
CTTCATCGTTCAAAGAATGACCACATTTACACCACAACCTTTGTGCCAGA
GCATGCTTTGCCCAATAAAGAACCAAATGCTTTAGATCCATTTTTGGAAC
CACTCATTACAGAGTTGGAAGAACTTTTTATTGATGGACTGGAAGTTAAG
TATCCCAATAGATGTTGGTAACCTGAAGGCTGGAAATTGCACAATCAGAT
GTTTTTTAATTTGTTGGACGGGTGGCTATCCAGCGCAGTGTCAAATTGGC
AAGTTTTCTTGCAGGGGGGCATATGGTTGCCGTGTAGATAAGTGTAAAGG
TGAATCTGTCGATGGTAGTAAAAATAAGTATTATTTCAACAACCGT Run BLAST on NCBI transcript from alignment at sc0002346:15081..16099- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040184 ID=TCONS_00040184|Name=TCONS_00040184|organism=Clytia hemisphaerica|type=transcript|length=1019bp|location=Sequence derived from alignment at sc0002346:15081..16099- (Clytia hemisphaerica)
CTTCATCGTTCAAAGAATGACCACATTTACACCACAACCTTTGTGCCAGA
GCATGCTTTGCCCAATAAAGAACCAAATGCTTTAGATCCATTTTTGGAAC
CACTCATTACAGAGTTGGAAGAACTTTTTATTGATGGTAAGTCTACTTTT
GAGGCATATTATAAATTATACTATACTATATTTTGCTGTTTTGTTATTGA
GATACAGTTCAACTGCAAAATCATTATGAAAATAACCAGGACCAAATCAA
CACTATTTTTGTTGACCAAGCAGAGAGAGATTGAATTGAAGAGATTACGG
ACATGAAACAGTTAGTTGCATTACTCTATTATTTGAACTTCAAAAATGAG
AATTCAATGGTTTTTAAATGTCTCGAATGAGAGCAAAATTTAGCAGTTTA
TTACACCTTACCACCCAGCTTAGGAGAAAATATTATCTTACCCAAAGTAA
GTATAATTGGATACTAAAGATACTTAAAAACTTTTGTTCTCACATGTCAC
CAACTGATTATATTCACCTACTTCACTCACTTAAATTTTCTTATGAATCT
CACGTTTAGGACTGGAAGTTAAGTATCCCAATAGATGTTGGTAACCTGAA
GGCTGGAAATTGCACAATCAGATGTTTTTTAATTTGTTGGACGGGTGGCT
ATCCAGCGCAGTGTCAAATTGGCAAGTTTTCTTGCAGGGGGGCATATGGT
TGCCGTGTAGATAAGTGTAAAGGTTTGAAAGCTTTCAGCTCAGTTTATTT
TGTGAATATCTTAGTTGTTCATTTAAGTGCCAGAAATTGCCATGAATTTG
TAAGTATAACCAGCATCAAAATCATCATTTTAGACAATTTAAATTTGACT
ATTTTGAACAAGGATATAATGTATTTTTAATTTAGAACTTTACTTTTATC
TAGGATACTTGACTCTCCGTAAACCTTTTTTACAATTCATGTTTAATCAA
CCTACGAAATTCTTTATTTCAGGTGAATCTGTCGATGGTAGTAAAAATAA
GTATTATTTCAACAACCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040184-exon-sc0002346-1575043694:15964..16099 | TCONS_00040184-exon-sc0002346-1575043694:15964..16099 | Clytia hemisphaerica | exon |
| TCONS_00040184-exon-sc0002346-1575043694:15378..15540 | TCONS_00040184-exon-sc0002346-1575043694:15378..15540 | Clytia hemisphaerica | exon |
| TCONS_00040184-exon-sc0002346-1575043694:15081..15127 | TCONS_00040184-exon-sc0002346-1575043694:15081..15127 | Clytia hemisphaerica | exon |
| TCONS_00040184-exon-sc0002346-1510915933:15964..16099 | TCONS_00040184-exon-sc0002346-1510915933:15964..16099 | Clytia hemisphaerica | exon |
| TCONS_00040184-exon-sc0002346-1510915933:15378..15540 | TCONS_00040184-exon-sc0002346-1510915933:15378..15540 | Clytia hemisphaerica | exon |
| TCONS_00040184-exon-sc0002346-1510915933:15081..15127 | TCONS_00040184-exon-sc0002346-1510915933:15081..15127 | Clytia hemisphaerica | exon |
| TCONS_00040184-exon-sc0002346-1491911889:15964..16099 | TCONS_00040184-exon-sc0002346-1491911889:15964..16099 | Clytia hemisphaerica | exon |
| TCONS_00040184-exon-sc0002346-1491911889:15378..15540 | TCONS_00040184-exon-sc0002346-1491911889:15378..15540 | Clytia hemisphaerica | exon |
| TCONS_00040184-exon-sc0002346-1491911889:15081..15127 | TCONS_00040184-exon-sc0002346-1491911889:15081..15127 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002346 | supercontig | sc0002346:15081..16099 - |
Blast
The following BLAST results are available for this feature:
|
