TCONS_00040161 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040161
Unique NameTCONS_00040161
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length102

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040161 ID=TCONS_00040161|Name=TCONS_00040161|organism=Clytia hemisphaerica|type=transcript|length=102bp
ATTCAGTTTTTATGGGTTTAACCAAAACTACTTTCTTATTAACATGATCG
TTAACAGCAATAATTTTGATGGATTCCTGCCAAGAATTTTGGTCGCTACT
TC
Run BLAST on NCBI

transcript from alignment at sc0002335:5613..5714

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040161 ID=TCONS_00040161|Name=TCONS_00040161|organism=Clytia hemisphaerica|type=transcript|length=102bp|location=Sequence derived from alignment at sc0002335:5613..5714 (Clytia hemisphaerica)
GAAGTAGCGACCAAAATTCTTGGCAGGAATCCATCAAAATTATTGCTGTT
AACGATCATGTTAATAAGAAAGTAGTTTTGGTTAAACCCATAAAAACTGA
AT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024365XLOC_024365Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040161-exon-sc0002335-1491911889:5613..5714TCONS_00040161-exon-sc0002335-1491911889:5613..5714Clytia hemisphaericaexon
TCONS_00040161-exon-sc0002335-1510915933:5613..5714TCONS_00040161-exon-sc0002335-1510915933:5613..5714Clytia hemisphaericaexon
TCONS_00040161-exon-sc0002335-1575043694:5613..5714TCONS_00040161-exon-sc0002335-1575043694:5613..5714Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002335supercontigsc0002335:5613..5714 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040161 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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