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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040157 ID=TCONS_00040157|Name=TCONS_00040157|organism=Clytia hemisphaerica|type=transcript|length=416bp
ATGTCCCGCATCTGCGTTGCAACTTTGTTATGGCAATGAACGATTGGAAG
ATTACATTAGAATCAACAATCAGCCTTACATATTTAGTAATGGAATCTCG
TTTAAGGACaaaatgagatttttcaaaGGAGATGCCCCTGCCTGTCAACT
TGAGGCAGGACAGCAAAAAGGGGGTAATCATTTTTGTTGGCATTGTCCTA
TGAAAGCATCAAGAGGGAAAGACTTGGCCCATTTGTTGAATTGCGAGCGG
CAGACAGTGCAAGAGAGGATAGACAAGCTAACAATGACACAGTAAGATCA
TATTTATTTCGATCAAAAAATATTATCTATTGCAAATATTTCATCAAATT
GTTTTCTCCCGTGTTCCCGGTGTTCATGATTGAATCACAAACAACTCCCA
TAGCATTATCTTTCTT Run BLAST on NCBI transcript from alignment at sc0002331:3..1452- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040157 ID=TCONS_00040157|Name=TCONS_00040157|organism=Clytia hemisphaerica|type=transcript|length=1450bp|location=Sequence derived from alignment at sc0002331:3..1452- (Clytia hemisphaerica)
ATGTCCCGCATCTGCGTTGCAACTTTGTTATGGCAATGAACGATTGGAAG
ATTACATTAGAATCAACAATCAGCCTTACATATTTAGTAATGGAATCTCG
TTTAAGGACAAAATGAGATTTTTCAAAGGTCAGTCTGAAAAACGAGGAAT
TTACACAGATATCTGTAAAGCCCGAAGGGCTAGATAGGCAACTTTAAGCT
TTCTCCAGCAAAAAAAAGTGAAGCAAAAATTTGACTTTTTAAATTTCGTG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAAAGCCCGAAGGGCTAGATAGGCAACTTTAAGCTTTC
TCCAGCAAAAAAAAAGTAAAGCAAAAATTTGACTTTTTAAATTTCGTGCC
GATGGATAGGAGCTAGCATTTTAATTGTTTTCGCAGTGCGAGATCAAAAA
AAGTAGGCAGCAAACGCTATTTCACATCTCTCAAACCGGTGAAATTGCAT
ATTTTAGTCACGTGACTTTCAAACCTAGCCCTTCGGGCTTTACAGATCTG
TGGGAGTTTCCACAAATTACTCATAATTAAAGGCATTTTACATCATCTCG
GACTAGTAAAAAATTCAGAAACCAATTTTTTCACATATTGAGTATCTGCT
TAACTTATTACCCGAACTGCTTTGAGCATAGTCACTAGAAATATGTATTG
TATAGTATTCAATTGACATTGCTTTGAGGTGTTTAATGGGATAAACTTTC
GCGTTGATTAAATTTCGCGGATTAGGGTGTCATCCGCGAAAATCGGCGAA
ATTAAGACCCAGTGGAAATTTGGAAAAATCCGCGAAATATTTCGAAACAA
AACTCAAAATACTTTTTGAATGGTAATTTGCATCAAAGAGGCGCAAATAA
TGTGTTTTAACAACCAACATGTATGATTTGACAGTGAAAGTNGCGAAATA
TTTCTAAACAAAACTCAAAATATGTCAAATAAATACTTTTTGAATGGTTA
CTTGCATCAAAGAGGCGCAAATAATGTGTTTTAACAACCAACATGTATGA
TTTGACAGTGAAAGTCACAAAACCGTTAAAATATTGACACCCAATAGTGC
CAGCCGCGAAAGTTTATCCCATTAAAGTATAACATTGTTCATTAGATTTT
TTCATATTATAGGAGATGCCCCTGCCTGTCAACTTGAGGCAGGACAGCAA
AAAGGGGGTAATCATTTTTGTTGGCATTGTCCTATGAAAGCATCAAGAGG
GAAAGACTTGGCCCATTTGTTGAATTGCGAGCGGCAGACAGTGCAAGAGA
GGATAGACAAGCTAACAATGACACAGTAAGATCATATTTATTTCGATCAA
AAAATATTATCTATTGCAAATATTTCATCAAATTGTTTTCTCCCGTGTTC
CCGGTGTTCATGATTGAATCACAAACAACTCCCATAGCATTATCTTTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040157-exon-sc0002331-1575043694:1325..1452 | TCONS_00040157-exon-sc0002331-1575043694:1325..1452 | Clytia hemisphaerica | exon |
| TCONS_00040157-exon-sc0002331-1575043694:3..290 | TCONS_00040157-exon-sc0002331-1575043694:3..290 | Clytia hemisphaerica | exon |
| TCONS_00040157-exon-sc0002331-1510915933:1325..1452 | TCONS_00040157-exon-sc0002331-1510915933:1325..1452 | Clytia hemisphaerica | exon |
| TCONS_00040157-exon-sc0002331-1510915933:3..290 | TCONS_00040157-exon-sc0002331-1510915933:3..290 | Clytia hemisphaerica | exon |
| TCONS_00040157-exon-sc0002331-1491911889:1325..1452 | TCONS_00040157-exon-sc0002331-1491911889:1325..1452 | Clytia hemisphaerica | exon |
| TCONS_00040157-exon-sc0002331-1491911889:3..290 | TCONS_00040157-exon-sc0002331-1491911889:3..290 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002331 | supercontig | sc0002331:3..1452 - |
Blast
The following BLAST results are available for this feature:
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