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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040150 ID=TCONS_00040150|Name=TCONS_00040150|organism=Clytia hemisphaerica|type=transcript|length=833bp
TTTTGCCGTGGAATCGAATGTTCTTGGACGGGAAAGTCCGTCCAAGATTT
TCTCTTCGGCGCGGCGCATTTTGCCGTGACTTTGGACAAGTTGCACTNAC
TTGTATCGTGCTCTAGCCAGTTCCTTGTCTCTCGGGTATTTTGATTGTTC
TGTTAGCGAACTTCTacgttttaaatgttttgaagGTATGTTGAGATTCA
GTTACTGTTTTGATGTTGTCTGTGAGGTGTGTGAATGGAAAGTGTTTTCA
GTACGTATTTTCGTTTTATAACTTGTTCTTTTTCCTTGACTTCCATTTGG
TTTCTCGTGTTAACATGCAGATACATCTCATTTTTCATGTTATTTCTTAG
TATTTTTTAGTCATATCCTTTGTACTTTTGTTGCTTTTTAGCCGTATTTC
TGAAGAGAAAACGAGTCGAAACACACCCACATTTGTCCTTAAGTGTCGTT
TGAATCAGACGTCTGGTGCGACATTTACACAATGTGATGACTTCTTTCTA
AATAAAGATCACAAATAACGGAACAGTTTCATTTCTGGACTGGTCAAAAG
CAAAAAACCACGCTTTTTAGCCGTCCTCTGTAAAAAATGGAGTGGGACAG
TCCTgtcaaaaagagaagaaagaaaaacgtAACGAAGAAGAAAGCAGAAA
TATGCGTTGTTGGTTGCCGCAACGTTAAAGAACCTTTGACTTGTTTTTCA
TCTAAATCATGGGagACGGTGTATAATGCGGCGGTATCTCGAAATGATGA
TGGTTTGATTGCCAAGTACACCAACAAGAATGAAAAATATGGGTACCATA
GAACTTGCTACCAATCGTACACGAATCCTAAGG Run BLAST on NCBI transcript from alignment at sc0002330:5182..6350+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040150 ID=TCONS_00040150|Name=TCONS_00040150|organism=Clytia hemisphaerica|type=transcript|length=1169bp|location=Sequence derived from alignment at sc0002330:5182..6350+ (Clytia hemisphaerica)
TTTTGCCGTGGAATCGAATGTTCTTGGACGGGAAAGTCCGTCCAAGATTT
TCTCTTCGGCGCGGCGCATTTTGCCGTGACTTTGGACAAGTTGCACTNAC
TTGTATCGTGCTCTAGCCAGTTCCTTGTCTCTCGGGTATTTTGATTGTTC
TGTTAGCGAACTTCTacgttttaaatgttttgaagGTATGTTGAGATTCA
GTTACTGTTTTGATGTTGTCTGTGAGGTGTGTGAATGGAAAGTGTTTTCA
GTACGTATTTTCGTTTTATAACTTGTTCTTTTTCCTTGACTTCCATTTGG
TTTCTCGTGTTAACATGCAGATACATCTCATTTTTCATGTTATTTCTTAG
TATTTTTTAGTCATATCCTTTGTACTTTTGTTGCTTTTTAGCCGTATTTC
TGAAGAGAAAACGAGTCGAAACACACCCACATTTGTCCTTAAGTGTCGTT
TGAATCAGACGTCTGGTGCGACATTTACACAATGTGATGACTTCTTTCTA
AATAAAGATCACAAATAACGGAACAGTTTCATTTCTGGACTGGTCAAAAG
CAAAAAACCACGCTTTTTAGCCGTCCTCTGTAAAAAATGGAGTGGGACAG
TCCTgtcaaaaagagaagaaagaaaaacgtAACGAAGAAGAAAGCAGAAA
TATGCGTTGTTGGTTGCCGCAACGTTAAAGAACCTTTGACTTGTTTTTCA
TCTAAATCATGGGaggtaaaaagatttttctagCTTTTCTCTCTAATGAA
TGAGTTCCATTTCTGAGACGAATGCGTATTTTTGCCGTGGTTTCAGATGG
CNAAGATTTTTCTAGCTTTTCTCTCTAATGAATGAGTTCCATTTCTGAGA
CGAATGCGTATTTTTGCCGTGGTTTCAGATGGCAGATGGTCAaacatgaa
ataaaactagACAACAAGGTTTTAGCTGGAAAGTCAACTTGCTTTTAACT
AATAATGGATTTGActactgtttttattttgattgccgtttttattttta
ttgtcgCTTTTGACAAACGTAGTCACGCGATGTATACTGAATCTAATTTA
GACGGTGTATAATGCGGCGGTATCTCGAAATGATGATGGTTTGATTGCCA
AGTACACCAACAAGAATGAAAAATATGGGTACCATAGAACTTGCTACCAA
TCGTACACGAATCCTAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040150-exon-sc0002330-1491911889:5182..5896 | TCONS_00040150-exon-sc0002330-1491911889:5182..5896 | Clytia hemisphaerica | exon |
| TCONS_00040150-exon-sc0002330-1510915933:5182..5896 | TCONS_00040150-exon-sc0002330-1510915933:5182..5896 | Clytia hemisphaerica | exon |
| TCONS_00040150-exon-sc0002330-1575043694:5182..5896 | TCONS_00040150-exon-sc0002330-1575043694:5182..5896 | Clytia hemisphaerica | exon |
| TCONS_00040150-exon-sc0002330-1491911889:6233..6350 | TCONS_00040150-exon-sc0002330-1491911889:6233..6350 | Clytia hemisphaerica | exon |
| TCONS_00040150-exon-sc0002330-1510915933:6233..6350 | TCONS_00040150-exon-sc0002330-1510915933:6233..6350 | Clytia hemisphaerica | exon |
| TCONS_00040150-exon-sc0002330-1575043694:6233..6350 | TCONS_00040150-exon-sc0002330-1575043694:6233..6350 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002330 | supercontig | sc0002330:5182..6350 + |
Blast
The following BLAST results are available for this feature:
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