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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040135 ID=TCONS_00040135|Name=TCONS_00040135|organism=Clytia hemisphaerica|type=transcript|length=444bp
ATCGTCGATATAAGGGGAAAATTACGAAATTTGGTGCtgtacaccttcag
ccaagtctaAAAAATACTGATGGGTCCCTATTGAGCTCTGGGCCAAGTCA
AGCTAGCGAAGAAATGACATCCCTGAGAAGTTAAAATAGCGCACGGCTTG
AAGTTGGCCTAGTGGTATAAGGCGTAATTGAAGACGCAGCGCCCGATTAG
GTTTTGCCTTAAACCGGTCTGGACTTTTTTAacatttagtacagcgcaag
accttcccgtaaggacgattgccgggccgcaCGGGTCTATAAATTTCGTA
ATTTTCCCCTTATATCGACGATCGACTCTCACtcgctttttttaaatatt
gctTATTCAGCAAAATCAGCGAGCCAAAAGGTGGGCCATACAGTAGGCCA
AATGGCCCGGGCCAACTAGGCGAGCCAGCTTTTGTTCAAACCCt Run BLAST on NCBI transcript from alignment at sc0002321:19722..21083- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040135 ID=TCONS_00040135|Name=TCONS_00040135|organism=Clytia hemisphaerica|type=transcript|length=1362bp|location=Sequence derived from alignment at sc0002321:19722..21083- (Clytia hemisphaerica)
ATCGTCGATATAAGGGGAAAATTACGAAATTTGGTGCTGTACACCTTCAG
CCAAGTCTAAAAAATACTGATGGGTCCCTATTGAGCTCTGGGCCAAGTCA
AGCTAGCGAAGAAATGACATCCCTGAGAAGTTAAAATAGCGCACGGCTTG
AAGTTGGCCTAGTGGTATAAGGCGTAATTGAAGACGCAGCGCCCGATTAG
GTTTTGCCTTAAACCGGTCTGGACTTTTTTAACAATTAAAGTCTATTCAC
GATAAGTGTGCACTCTTTTACCTATAACTTTTGAAGGAATTCTTCAATCT
TTATAAATTTGGTATCATTGGAAAGATATTAGTGAGTGGATCAATTTGAA
ATAAAAAAATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTAAAAATGAAGATGAAAATGAAGAAGAAAAAAATGAAGATCTTG
TAGAAAGGTGCTATAACTATCATTTTCACTGAAGTGAATCCTTGGTTATC
GAACATTATCACTATGAAAAAATTTCTCGAAAATAATCATTCAGTCAAAA
GATATCAAGCAAAGTTATAAGCTGATCGACGTCTAAAAACGCTGTTTTCT
GCTGTTTTCTGCTGTTTTTTGGGGTCACTCACTTATTAACTTTGTATCAT
AACTTTATATTGAATAAATATTTTAGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAAATATCTCTCCAACGATACCAAATTTATAAAGATTGAAGAATTCC
TTCAAAAGTTATAAGTAAAAGAAAAAAGAGTGCACACTTATCGTGAACAG
ACTTTAGTACAGCGCAAGACCTTCCCGTAAGGACGATTGCCGGGCCGCAC
GGGTCTATAAATTTCGTAATTTTCCCCTTATATCGACGATCGACTCTCAC
TCGCTTTTTTTAAATATTGCTTATTCAGCAAAATCAGCGAGCCAAAAGGT
GGGCCATACAGTAGGCCAAATGGCCCGGGCCAACTAGGCGAGCCAGCTTT
TGTTCAAACCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040135-exon-sc0002321-1575043694:20850..21083 | TCONS_00040135-exon-sc0002321-1575043694:20850..21083 | Clytia hemisphaerica | exon |
| TCONS_00040135-exon-sc0002321-1575043694:19722..19931 | TCONS_00040135-exon-sc0002321-1575043694:19722..19931 | Clytia hemisphaerica | exon |
| TCONS_00040135-exon-sc0002321-1510915933:20850..21083 | TCONS_00040135-exon-sc0002321-1510915933:20850..21083 | Clytia hemisphaerica | exon |
| TCONS_00040135-exon-sc0002321-1510915933:19722..19931 | TCONS_00040135-exon-sc0002321-1510915933:19722..19931 | Clytia hemisphaerica | exon |
| TCONS_00040135-exon-sc0002321-1491911889:20850..21083 | TCONS_00040135-exon-sc0002321-1491911889:20850..21083 | Clytia hemisphaerica | exon |
| TCONS_00040135-exon-sc0002321-1491911889:19722..19931 | TCONS_00040135-exon-sc0002321-1491911889:19722..19931 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002321 | supercontig | sc0002321:19722..21083 - |
Blast
The following BLAST results are available for this feature:
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