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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040108 ID=TCONS_00040108|Name=TCONS_00040108|organism=Clytia hemisphaerica|type=transcript|length=1000bp
aaaaaaaagacAATTGAATCCAATAGCAACTCCAATCAGATTCGAGCTTG
ACACGTGACTTCTATTCAGACCCTGTTTTTCGACATATGCCCCCCCATCG
CCTTTTTGAACCAtgcccccccaaaaaaaaaattttttttaaataattca
aaaatcttgaaaaaaagaacattGCCCCCAcacatatcaaaataaaaaaa
ttcgagGCTTGCCTGCacaaattttgttgatttttacgcGAGACCCGagc
aaatgacgtcacagattatattttcttatcaacaaaaaaacattttttca
tgacTTCTTTAATGAGTAATTATACTATAAATTtgttataaaatatttta
tgcaATAATTCATTCCAATATATCATGATTACCACTACCCTGTTTTTCGA
CATATGCCCCCACATCGTCTTTTTGAATCATGTCCCCCCTAATTACGTAC
AATATTTACGACATTGCTATATCAAtgtttcaattattttcttaaacgtt
ttttaaaagaattcaaaaatcttgaaaaaaatgacgtcacagacTGTACT
TCCTTATTAACAAATTACATTTTTAGTAATTATGTAATAATTCATTCCAA
TATATCATAATTACCACTCTATTCAGACCCTGTTTTTTCGACATAAGTAT
GCCCCAACATCGTCTTTTTTAACCATGCCCCCCCTAATTACATACAATGT
TTACGACATTGCTATATCAATGTTTCaattattttctaatttatGTATTT
TATGTGTGAACCATATATGGAAAAACCATTGtaattaaaaattcaaaaat
ttctataaaaaccgATAATTTTTCTAACAAAATCACTCAATGCCGAAAAA
ATAGAAGGCCGAGAAGAAAACCAAACATCTAAACAACCAATCAACAAATC
AAGACttgcaatcaacaccaaaacGATGTCTAAACGATCACGCACCGTTG
CTTATAAGCAACCTAAAATTCTTGAGGAAGGAGAAGATGAAGAAATCATC Run BLAST on NCBI transcript from alignment at sc0002311:1..1000 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040108 ID=TCONS_00040108|Name=TCONS_00040108|organism=Clytia hemisphaerica|type=transcript|length=1000bp|location=Sequence derived from alignment at sc0002311:1..1000 (Clytia hemisphaerica)
GATGATTTCTTCATCTTCTCCTTCCTCAAGAATTTTAGGTTGCTTATAAG
CAACGGTGCGTGATCGTTTAGACATCgttttggtgttgattgcaaGTCTT
GATTTGTTGATTGGTTGTTTAGATGTTTGGTTTTCTTCTCGGCCTTCTAT
TTTTTCGGCATTGAGTGATTTTGTTAGAAAAATTATcggtttttatagaa
atttttgaatttttaattaCAATGGTTTTTCCATATATGGTTCACACATA
AAATACataaattagaaaataattGAAACATTGATATAGCAATGTCGTAA
ACATTGTATGTAATTAGGGGGGGCATGGTTAAAAAAGACGATGTTGGGGC
ATACTTATGTCGAAAAAACAGGGTCTGAATAGAGTGGTAATTATGATATA
TTGGAATGAATTATTACATAATTACTAAAAATGTAATTTGTTAATAAGGA
AGTACAgtctgtgacgtcatttttttcaagatttttgaattcttttaaaa
aacgtttaagaaaataattgaaacaTTGATATAGCAATGTCGTAAATATT
GTACGTAATTAGGGGGGACATGATTCAAAAAGACGATGTGGGGGCATATG
TCGAAAAACAGGGTAGTGGTAATCATGATATATTGGAATGAATTATtgca
taaaatattttataacaAATTTATAGTATAATTACTCATTAAAGAAgtca
tgaaaaaatgtttttttgttgataagaaaatataatctgtgacgtcattt
gctCGGGTCTCgcgtaaaaatcaacaaaatttgtGCAGGCAAGCctcgaa
tttttttattttgatatgtgTGGGGGCaatgttctttttttcaagatttt
tgaattatttaaaaaaaattttttttttgggggggcaTGGTTCAAAAAGG
CGATGGGGGGGCATATGTCGAAAAACAGGGTCTGAATAGAAGTCACGTGT
CAAGCTCGAATCTGATTGGAGTTGCTATTGGATTCAATTgtctttttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040108-exon-sc0002311-1491911889:1..1000 | TCONS_00040108-exon-sc0002311-1491911889:1..1000 | Clytia hemisphaerica | exon |
| TCONS_00040108-exon-sc0002311-1510915933:1..1000 | TCONS_00040108-exon-sc0002311-1510915933:1..1000 | Clytia hemisphaerica | exon |
| TCONS_00040108-exon-sc0002311-1575043694:1..1000 | TCONS_00040108-exon-sc0002311-1575043694:1..1000 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002311 | supercontig | sc0002311:1..1000 . |
Blast
The following BLAST results are available for this feature:
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