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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040101 ID=TCONS_00040101|Name=TCONS_00040101|organism=Clytia hemisphaerica|type=transcript|length=1062bp
atcgaggaggctctggatcgcttcgcaacttttatatatatacggCTTGT
TAAAAAGAACTTACCATTACTTGTTTCCGCCATTTTCTTGATTACTACCA
TATATAAACAATATGTACTTTTCAAACACAGAAAGATAAATCACACCACA
AAAGTCTTATAGCCTTTACATACACAATATTAAAAAGATGTTAACTGACA
CTTTCGGTATCATTAATCTCCGGTGGCAGTAGATTTTGGTTCTTTTTTTA
GGCAATGTTCTCTTTGTCATGCTTCTAATTCCCAAAACGCACATCTCAAA
ATCATATCTATCGGGCACTCGGCCTAAAGCCCCTTTTACACGTGGTCAAT
CTAAGGCAACGTAATTTATGTAAAACTGCCAACTGTTAATTTTACGTCAT
CAATTTATGTAGCATTATTTAATGGCttttaatataattgatgtgcagAG
TAATTATCTCGTTTTATCGAAGTGTAACCTTTAACAACAAGATATTCAAC
GTATTATATTCAATCTGTTAAACCGTTTTCATTTCGCCCACCCGTATCCT
AGCTGTCCTAACTTTTTGTTTTCTCGTGCGCTCAAGAGGAAAACGAAACT
GAGCGATATTCTTCGAAGAAAGGACgccagaaacaaacccaaagatcaaa
agatgtattttgaggttgtgaatcgatcctgtgaagatgaaaaatttcgg
ctctgattttttttcggaaccCCGAAAAACTCTAATTTACATCTTCCCTA
ACAGTAAAAGGTTGCGAGAtatgggttagcgaggcaaaaatcgctaaaaa
gctggtaaaatcgtaatcctccaatatcgaggttccagcttcACTGGTTT
TTAAACATCTTCAATTAGTCTAGTTGTTGAAAATCTGGTGCAGGTGTACG
AAAAGAGCTAATCATACCCCTGTCACAGTGTCACAGCCACtgtggggatg
aaagtttataCATGGCAGTTTCCAAGCTGGGCcaaatctttagacaaatt
ttgTAGTGGGTCCTGTCGTATCGGGTTTTCCTCTGAGACTATttattatt
gaaatttgaaag Run BLAST on NCBI transcript from alignment at sc0002307:7957..9018 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040101 ID=TCONS_00040101|Name=TCONS_00040101|organism=Clytia hemisphaerica|type=transcript|length=1062bp|location=Sequence derived from alignment at sc0002307:7957..9018 (Clytia hemisphaerica)
ctttcaaatttcaataataaATAGTCTCAGAGGAAAACCCGATACGACAG
GACCCACTAcaaaatttgtctaaagatttgGCCCAGCTTGGAAACTGCCA
TGtataaactttcatccccacaGTGGCTGTGACACTGTGACAGGGGTATG
ATTAGCTCTTTTCGTACACCTGCACCAGATTTTCAACAACTAGACTAATT
GAAGATGTTTAAAAACCAGTgaagctggaacctcgatattggaggattac
gattttaccagctttttagcgatttttgcctcgctaacccataTCTCGCA
ACCTTTTACTGTTAGGGAAGATGTAAATTAGAGTTTTTCGGggttccgaa
aaaaaatcagagccgaaatttttcatcttcacaggatcgattcacaacct
caaaatacatcttttgatctttgggtttgtttctggcGTCCTTTCTTCGA
AGAATATCGCTCAGTTTCGTTTTCCTCTTGAGCGCACGAGAAAACAAAAA
GTTAGGACAGCTAGGATACGGGTGGGCGAAATGAAAACGGTTTAACAGAT
TGAATATAATACGTTGAATATCTTGTTGTTAAAGGTTACACTTCGATAAA
ACGAGATAATTACTctgcacatcaattatattaaaaGCCATTAAATAATG
CTACATAAATTGATGACGTAAAATTAACAGTTGGCAGTTTTACATAAATT
ACGTTGCCTTAGATTGACCACGTGTAAAAGGGGCTTTAGGCCGAGTGCCC
GATAGATATGATTTTGAGATGTGCGTTTTGGGAATTAGAAGCATGACAAA
GAGAACATTGCCTAAAAAAAGAACCAAAATCTACTGCCACCGGAGATTAA
TGATACCGAAAGTGTCAGTTAACATCTTTTTAATATTGTGTATGTAAAGG
CTATAAGACTTTTGTGGTGTGATTTATCTTTCTGTGTTTGAAAAGTACAT
ATTGTTTATATATGGTAGTAATCAAGAAAATGGCGGAAACAAGTAATGGT
AAGTTCTTTTTAACAAGccgtatatatataaaagttgcgaagcgatccag
agcctcctcgat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040101-exon-sc0002307-1491911889:7957..9018 | TCONS_00040101-exon-sc0002307-1491911889:7957..9018 | Clytia hemisphaerica | exon |
| TCONS_00040101-exon-sc0002307-1510915933:7957..9018 | TCONS_00040101-exon-sc0002307-1510915933:7957..9018 | Clytia hemisphaerica | exon |
| TCONS_00040101-exon-sc0002307-1575043694:7957..9018 | TCONS_00040101-exon-sc0002307-1575043694:7957..9018 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002307 | supercontig | sc0002307:7957..9018 . |
Blast
The following BLAST results are available for this feature:
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