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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040074 ID=TCONS_00040074|Name=TCONS_00040074|organism=Clytia hemisphaerica|type=transcript|length=1545bp
ACATTTTATTTAGCGAAAACATTTAGTAGGTTGGGAACTTTTTGTCGAAG
GAGGAGAGAAAGCACagttacaaatttatttttctcatactTACTTCACT
TTATCTTGTTGTGCcctttcttattttcatcactttgaaaaaataatttc
taccTACTATGtacaatttataatttttttacaaaatagaaaatttgaaa
aatcgtttcattagaaaaaactaaacgTAAAAAAGCAAGAACTGAACCTT
ATTTCGTGTATCTTGTTCCCTTTGAACGGGCAGTGGGAGTGATAGCGATT
GGCAGCGAATGAATTTCTTCATCTTTCTTATTTCATTGGTAAACACTACA
AACCTGTCAGTTCATGTGGATAAATTGAGACTGTGATGGTGGTGGCTCGC
ATTGATATTTATTAAGAATTTAAAACTATCGTAAACAGTTTGTTACTTAA
GTTGAGAATATACTCCTAAAAGTTTAAATTGTTTATGGCATGATATACTC
AGAAGTAAAAATTATTATCTCCACCACATCTCCAAGTGAATTCGATTTCG
TATCGAATTCGTACATATTTTCTAATTCTCATTGGTCACCCAAAAGCTCC
ATAAAACGGTAACAATAAATGTTCAAATAACATTCATCTTAACGTCGATA
TAGCAAACGCATGTTTGTATCAAAAGGTCTATGATTAAAATATCACTTCA
TCACACAGATTCCAAAGTTATTCGTGATACTTGCTAAAAGTCTTGGTCAG
ATATCATTTTTGAATATCCAGTACGATAAAAAACTTCTTCGTGTGAACCT
CAGTAAGTTGGCAAGTATACTAAAATGACATCAAACCAGTATACTAAAAT
GACGATTAATCTTTTCTCCGCTGTCCCTTCTTATAGACGTAAAGCCATCT
CAACTTGTCACCACCGTCTCCGTGTTTCCAACGTAACGTAGTCTTCATCA
TCGTGGAGTCAATAACGTTCTCACACGAGAAAAGATTGTAGGAATTCTTC
GCCCGTCACAATGGCCGTCGTTAGAATAATGAAACGATATCCTGTGAAGA
ATAATGGTTGTTGTGTTTAAAAATATATGATAAAAGATACTATGTATTAT
CTGaatcgaggggtaaatcactcgaaaaagtagaaaaatggTGTACAAGA
tttgtgatttatttttgatttatttcttattaataaaattgtgtacgaga
tttattttagtgatttgcccctcgatCTAAATCTTAACCGAAAACGTTCA
TAAATGctgcatgttttttttataagcaagtgtctgctcCTATATCAgac
tcgcattatgcttagtattctattgttctccAACAATAGAGCCATTATTT
AGGTAcccaaaactgagcctgcatatgcttataaacgctatgcttataaa
agaaaaaacatgtattcaatACCCCTAATATGCGTGTTTTTACGTGCAAT
TTTCAAtatcaaaagcttataactcaATCACTATAAGACCcgatttaaaa
atctttgtctCGAATTTTAACTTAACTACTTTGTCTCATTAGTAA Run BLAST on NCBI transcript from alignment at sc0002301:3615..5159- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040074 ID=TCONS_00040074|Name=TCONS_00040074|organism=Clytia hemisphaerica|type=transcript|length=1545bp|location=Sequence derived from alignment at sc0002301:3615..5159- (Clytia hemisphaerica)
ACATTTTATTTAGCGAAAACATTTAGTAGGTTGGGAACTTTTTGTCGAAG
GAGGAGAGAAAGCACAGTTACAAATTTATTTTTCTCATACTTACTTCACT
TTATCTTGTTGTGCCCTTTCTTATTTTCATCACTTTGAAAAAATAATTTC
TACCTACTATGTACAATTTATAATTTTTTTACAAAATAGAAAATTTGAAA
AATCGTTTCATTAGAAAAAACTAAACGTAAAAAAGCAAGAACTGAACCTT
ATTTCGTGTATCTTGTTCCCTTTGAACGGGCAGTGGGAGTGATAGCGATT
GGCAGCGAATGAATTTCTTCATCTTTCTTATTTCATTGGTAAACACTACA
AACCTGTCAGTTCATGTGGATAAATTGAGACTGTGATGGTGGTGGCTCGC
ATTGATATTTATTAAGAATTTAAAACTATCGTAAACAGTTTGTTACTTAA
GTTGAGAATATACTCCTAAAAGTTTAAATTGTTTATGGCATGATATACTC
AGAAGTAAAAATTATTATCTCCACCACATCTCCAAGTGAATTCGATTTCG
TATCGAATTCGTACATATTTTCTAATTCTCATTGGTCACCCAAAAGCTCC
ATAAAACGGTAACAATAAATGTTCAAATAACATTCATCTTAACGTCGATA
TAGCAAACGCATGTTTGTATCAAAAGGTCTATGATTAAAATATCACTTCA
TCACACAGATTCCAAAGTTATTCGTGATACTTGCTAAAAGTCTTGGTCAG
ATATCATTTTTGAATATCCAGTACGATAAAAAACTTCTTCGTGTGAACCT
CAGTAAGTTGGCAAGTATACTAAAATGACATCAAACCAGTATACTAAAAT
GACGATTAATCTTTTCTCCGCTGTCCCTTCTTATAGACGTAAAGCCATCT
CAACTTGTCACCACCGTCTCCGTGTTTCCAACGTAACGTAGTCTTCATCA
TCGTGGAGTCAATAACGTTCTCACACGAGAAAAGATTGTAGGAATTCTTC
GCCCGTCACAATGGCCGTCGTTAGAATAATGAAACGATATCCTGTGAAGA
ATAATGGTTGTTGTGTTTAAAAATATATGATAAAAGATACTATGTATTAT
CTGAATCGAGGGGTAAATCACTCGAAAAAGTAGAAAAATGGTGTACAAGA
TTTGTGATTTATTTTTGATTTATTTCTTATTAATAAAATTGTGTACGAGA
TTTATTTTAGTGATTTGCCCCTCGATCTAAATCTTAACCGAAAACGTTCA
TAAATGCTGCATGTTTTTTTTATAAGCAAGTGTCTGCTCCTATATCAGAC
TCGCATTATGCTTAGTATTCTATTGTTCTCCAACAATAGAGCCATTATTT
AGGTACCCAAAACTGAGCCTGCATATGCTTATAAACGCTATGCTTATAAA
AGAAAAAACATGTATTCAATACCCCTAATATGCGTGTTTTTACGTGCAAT
TTTCAATATCAAAAGCTTATAACTCAATCACTATAAGACCCGATTTAAAA
ATCTTTGTCTCGAATTTTAACTTAACTACTTTGTCTCATTAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040074-exon-sc0002301-1575043694:3615..5159 | TCONS_00040074-exon-sc0002301-1575043694:3615..5159 | Clytia hemisphaerica | exon |
| TCONS_00040074-exon-sc0002301-1510915933:3615..5159 | TCONS_00040074-exon-sc0002301-1510915933:3615..5159 | Clytia hemisphaerica | exon |
| TCONS_00040074-exon-sc0002301-1491911889:3615..5159 | TCONS_00040074-exon-sc0002301-1491911889:3615..5159 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002301 | supercontig | sc0002301:3615..5159 - |
Blast
The following BLAST results are available for this feature:
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