TCONS_00040045 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040045
Unique NameTCONS_00040045
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length194

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040045 ID=TCONS_00040045|Name=TCONS_00040045|organism=Clytia hemisphaerica|type=transcript|length=194bp
CATCCATCATGATCCTTACTATGAGAAGTGGAGGGTGTGTCATTGCTGGG
TGGAACAAAGAATGATCCTCCCCCAGACTTCTTCCACTTTTCATAGCATG
CTTCACTGTAAGTGATGGAGTCTTGACAGTTATTATCCCGGCAAAGTTGT
CGAAACTTGTGCTTGGATAGATTCTGGGGTTTCGGGATGTTCTT
Run BLAST on NCBI

transcript from alignment at sc0002287:17043..17236

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040045 ID=TCONS_00040045|Name=TCONS_00040045|organism=Clytia hemisphaerica|type=transcript|length=194bp|location=Sequence derived from alignment at sc0002287:17043..17236 (Clytia hemisphaerica)
AAGAACATCCCGAAACCCCAGAATCTATCCAAGCACAAGTTTCGACAACT
TTGCCGGGATAATAACTGTCAAGACTCCATCACTTACAGTGAAGCATGCT
ATGAAAAGTGGAAGAAGTCTGGGGGAGGATCATTCTTTGTTCCACCCAGC
AATGACACACCCTCCACTTCTCATAGTAAGGATCATGATGGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024265XLOC_024265Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040045-exon-sc0002287-1491911889:17043..17236TCONS_00040045-exon-sc0002287-1491911889:17043..17236Clytia hemisphaericaexon
TCONS_00040045-exon-sc0002287-1510915933:17043..17236TCONS_00040045-exon-sc0002287-1510915933:17043..17236Clytia hemisphaericaexon
TCONS_00040045-exon-sc0002287-1575043694:17043..17236TCONS_00040045-exon-sc0002287-1575043694:17043..17236Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002287supercontigsc0002287:17043..17236 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040045 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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