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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040035 ID=TCONS_00040035|Name=TCONS_00040035|organism=Clytia hemisphaerica|type=transcript|length=523bp
TCATATGTGACCGctgaattttaaaataaaatcaacacTCCCGGGCAACT
tgtcttcaaatattttgttaacAGAATTCGACGATGGGTGAACTTTTGAA
TTGGCAACACTACGATAAAAGAGCGTTACAACGAAACCAGATGGAAGGTT
TATCTGATTGTGACGCCATAACCTGTGTTTTCCAAAATGAAACAGGTTCA
ACGACAGAAACGTGAAACGAAACAGGCTAAGAACTAGAAGAATAAATTTC
TTATCCCAGGAGGGGGAACTACCCTTGCTGACCGACGGGGATGtcccgct
gaggttcgaaaaatggaccctacgtgggattCGTTTGTTGAAATTGTTGC
CGCAATTTGCGAAAAAGTAATAACATGAATGGTActgaaattcccaaaat
tttctcaatatCTTCCAAATTTTTTCCTATATTCCCCCAAAAGGTAGCCA
ACGAGGGGCGAGGGACTGAttctgtttttgtatttttgcgacccatatga
atttgaaaaaagtacCCTGACTA Run BLAST on NCBI transcript from alignment at sc0002279:7509..8682- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040035 ID=TCONS_00040035|Name=TCONS_00040035|organism=Clytia hemisphaerica|type=transcript|length=1174bp|location=Sequence derived from alignment at sc0002279:7509..8682- (Clytia hemisphaerica)
TCATATGTGACCGCTGAATTTTAAAATAAAATCAACACTCCCGGGCAACT
TGTCTTCAAATATTTTGTTAACAGAATTCGACGATGGGTGAACTTTTGAA
TTGGCAACACTACGATAAAAGAGCGTTACAACGAAACCAGGTAAGGTATT
GATTACAACGGTTTGCCGTATAGTATGATATGTGATTATATTTCATAGCC
CTGCAATATGACATCATACCTTATAACCTTTCACTGCATTTTTAATATTC
TCGCTCAGAATAAATCTGTTCCAAGACAAATGGTGAGTCCCTACTTTTTG
ATACATGGTGTAATGAAAAGTAATACCTCGGTGGAAAAATAATTTGAGTA
GACAAATTTAAGGCATAAATTCCACAGACTTTTTTTATAAGAATATCTTC
TATAAGAATACCAGGGTGAAAATTGGCCAAATCGTAAGAATATCCTAAGA
ATCCTCTAGGGTAAGTTTCACAGAATTTTATAAGAATACAGTCACTTTGT
ATTAGGTTAACAGAAAAAACTGCTTCCTTTGTTAGACATAAATTGAAGCT
TTGAGGCAGAAATGTAATTTTAGCTCCAAAAGTCCAAAACTCTGAAATTG
ATCATTTCTCATGTTTGTGAAAAAGTCAAGTGTGAAAAAGATAGAATACA
TTAAGGATATTTCACCCTCAATCTTGGCAATTTCTTAAGAATACTTGACC
CCCATCCAAAGTACACTATTCTTATAAAAAACGTGTATTTTTGGATTTAG
AATTTATTGCCTTCAAATATCTTTTTTTTTTGTTATTTCAGATGGAAGGT
TTATCTGATTGTGACGCCATAACCTGTGTTTTCCAAAATGAAACAGGTTC
AACGACAGAAACGTGAAACGAAACAGGCTAAGAACTAGAAGAATAAATTT
CTTATCCCAGGAGGGGGAACTACCCTTGCTGACCGACGGGGATGTCCCGC
TGAGGTTCGAAAAATGGACCCTACGTGGGATTCGTTTGTTGAAATTGTTG
CCGCAATTTGCGAAAAAGTAATAACATGAATGGTACTGAAATTCCCAAAA
TTTTCTCAATATCTTCCAAATTTTTTCCTATATTCCCCCAAAAGGTAGCC
AACGAGGGGCGAGGGACTGATTCTGTTTTTGTATTTTTGCGACCCATATG
AATTTGAAAAAAGTACCCTGACTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040035-exon-sc0002279-1575043694:8543..8682 | TCONS_00040035-exon-sc0002279-1575043694:8543..8682 | Clytia hemisphaerica | exon |
| TCONS_00040035-exon-sc0002279-1575043694:7509..7891 | TCONS_00040035-exon-sc0002279-1575043694:7509..7891 | Clytia hemisphaerica | exon |
| TCONS_00040035-exon-sc0002279-1510915933:8543..8682 | TCONS_00040035-exon-sc0002279-1510915933:8543..8682 | Clytia hemisphaerica | exon |
| TCONS_00040035-exon-sc0002279-1510915933:7509..7891 | TCONS_00040035-exon-sc0002279-1510915933:7509..7891 | Clytia hemisphaerica | exon |
| TCONS_00040035-exon-sc0002279-1491911889:8543..8682 | TCONS_00040035-exon-sc0002279-1491911889:8543..8682 | Clytia hemisphaerica | exon |
| TCONS_00040035-exon-sc0002279-1491911889:7509..7891 | TCONS_00040035-exon-sc0002279-1491911889:7509..7891 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002279 | supercontig | sc0002279:7509..8682 - |
Blast
The following BLAST results are available for this feature:
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