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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039986 ID=TCONS_00039986|Name=TCONS_00039986|organism=Clytia hemisphaerica|type=transcript|length=647bp
gGCAAAGATGGCAGACAAGCAAATGGaagaagatgaaatttttctcagcT
TTATTGCAACCAAACAGAACTTCAATAGTCTGGATGATAATTTTAATCCA
AATAGCTCGATAGATGATGTTATTCAATCAGAAATCCATTGTGTAGAAAA
TGGAGAATATGCTGTTGAGAAGATGATTATTGATGATGACGAACATGCCA
CTCAAGGTCAAGAACAAGAAGACCAAAACTTTAGTTTCTCTACAACTACT
ATAAATGACACTCAAGGGGCTGCTGAGGAGGAACATAATGATGCATTTGC
AAGTGTCCGTGACCAACTACAACCACAAAATAATGACTCTTCACAAGAGG
ACAGTCCTTTAACGTCAAATTGGGGCGATTTTTTTGATGTCAAGCTTGAA
GACTTACCACACATGAGACCAGGTAAAttcatttttgactttgaaatttt
tgataaccTGCGATCATGGTATACGTATACATTTGGTACTGCAATCCCGA
TACACGTGAACACGACCGCAGTATACCAGATTCTGTTATAAAAACTCNgc
gctttttaatgaaattaacattttcaaaaactatgagaaattgcctaaaa
tttgagccatagatgaaaaaatttgagccaagccaaccttcaAAACT Run BLAST on NCBI transcript from alignment at sc0002260:11362..12590- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039986 ID=TCONS_00039986|Name=TCONS_00039986|organism=Clytia hemisphaerica|type=transcript|length=1229bp|location=Sequence derived from alignment at sc0002260:11362..12590- (Clytia hemisphaerica)
GGCAAAGATGGCAGACAAGCAAATGGAAGAAGATGAAATTTTTCTCAGCT
TTATTGCAACCAAACAGAACTTCAATAGTCTGGATGATAATTTTAATCCA
AATAGCTCGATAGATGATGTTATTCAATCAGAAATCCATTGTGTAGAAAA
TGGAGAATATGCTGTTGAGAAGATGATTATTGATGATGACGAACATGCCA
CTCAAGGTCAAGAACAAGAAGACCAAAACTTTAGTTTCTCTACAACTACT
ATAAATGACACTCAAGGGGCTGCTGAGGAGGAACATAATGATGCATTTGC
AAGTGTCCGTGACCAACTACAACCACAAAATAATGTAGGTTTAATACAAT
TAGATTATAAAGGGATAGAACTCCTAGACTATATGTATCACAAGTGTTTT
TTTTCAACCGGTATATATTTCCAACTGTCCAACGAAGCCATATTTTGGTT
TGTACAGAAATTTTGCCCGCTCAAATCTAAATAACAAAATGGTCAATCTC
ACTAAAGCAAAACATTGCGGCCACGGCATTTCCGCCAATAAGACGATATT
GGTGAAATTGGATGATTTACGACCCTGCCGGCGCACCGTACGTACAGTCC
GGTGTTTTTTGTCCGGTGTCAAAAAGTATCCTTTCGCTACACCGGATGTG
CGGTAAGACTGGTGTCAGTCCGGTGTTAAATGCAGGGAGCTCTAGGCACC
GAACATGCGTTTGAAAAAAATTAATGTGTAATTACACAGCCTTTCTAATT
CAGATTTATTTGCGTTGGCAAAAATTCTGGGTCCTATAGTACAGTAAGCA
CTTTTACGTCAGCATAGCCAAATTAGAATGGCTGTTACACCTTTGCACCT
TTGCACCTTATTCTAAATTCATGTATAATATTTTCCAATTCATTGAATTT
TTATCTCTTTTTATAGGACTCTTCACAAGAGGACAGTCCTTTAACGTCAA
ATTGGGGCGATTTTTTTGATGTCAAGCTTGAAGACTTACCACACATGAGA
CCAGGTAAATTCATTTTTGACTTTGAAATTTTTGATAACCTGCGATCATG
GTATACGTATACATTTGGTACTGCAATCCCGATACACGTGAACACGACCG
CAGTATACCAGATTCTGTTATAAAAACTCNGCGCTTTTTAATGAAATTAA
CATTTTCAAAAACTATGAGAAATTGCCTAAAATTTGAGCCATAGATGAAA
AAATTTGAGCCAAGCCAACCTTCAAAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039986-exon-sc0002260-1575043694:12257..12590 | TCONS_00039986-exon-sc0002260-1575043694:12257..12590 | Clytia hemisphaerica | exon |
| TCONS_00039986-exon-sc0002260-1575043694:11362..11674 | TCONS_00039986-exon-sc0002260-1575043694:11362..11674 | Clytia hemisphaerica | exon |
| TCONS_00039986-exon-sc0002260-1510915933:12257..12590 | TCONS_00039986-exon-sc0002260-1510915933:12257..12590 | Clytia hemisphaerica | exon |
| TCONS_00039986-exon-sc0002260-1510915933:11362..11674 | TCONS_00039986-exon-sc0002260-1510915933:11362..11674 | Clytia hemisphaerica | exon |
| TCONS_00039986-exon-sc0002260-1491911889:12257..12590 | TCONS_00039986-exon-sc0002260-1491911889:12257..12590 | Clytia hemisphaerica | exon |
| TCONS_00039986-exon-sc0002260-1491911889:11362..11674 | TCONS_00039986-exon-sc0002260-1491911889:11362..11674 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002260 | supercontig | sc0002260:11362..12590 - |
Blast
The following BLAST results are available for this feature:
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