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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039975 ID=TCONS_00039975|Name=TCONS_00039975|organism=Clytia hemisphaerica|type=transcript|length=841bp
GAAGAAACTATTGATGCTAGTTTTTGAAGAGAGAGCACATTGATCCTGGG
TTTGTAAACCTTCAAATACGACTCCCTGCCCCGATTCCCCAGACTCCAGA
GATTTTCTTGTTTTGTGCCCGGGGATtttaacataactttttgatACTTA
AGCCGGACTGGATGCGCGATCCCTGCGACGTACCTAAACTATCAGGTGAT
TGCCTAGGCGGGCTTCAATTTCACAATCTCTATTCTGCCCGCTTTCTGCA
TGGTTTGTTTGTCAGGGCtataggaaatatttttttcgttcCTCGCCCGG
GACATTTGGCCCATTAGTGTTGCGAGCCTGATCCCATAAAACCATATTTT
ACTTGCGAACACACGTCCACTTATGCGGCCTTGCAGTTCACTTATCTCGC
TGCACGGTTTGTTTGTCCGggaatagaaattttttttcgttcccCCGACA
TTTGCCCCATCACGCCCCATCTTGCCCAGTGTTGCAAGCTCAATCCCATA
AAACCATATTTTAGCTATGAACGGAAATCCCcgttagaaaaaatcaaaac
atcgatAAGTGGTTAAACTTTCTAAATAACTTTGCTAAATCAAAACACGG
GAAAACATCATGCGACGTATGACCACAACTCCCGCTCGCttcaatcaaga
atttggtCACGTGATCTGCCAGCAAAAATCGATATCTATAtatctttttt
gtaaaaaaacaagAACCTTCTCACTTCCAAATGTTATGTCcagcagtgta
gacctaaagctctaaaccagcatctaataacatgaaaaccagaatatgat
tcttcaatgggaatcaaaactataaagtgcacttacaaaca Run BLAST on NCBI transcript from alignment at sc0002260:13966..14890+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039975 ID=TCONS_00039975|Name=TCONS_00039975|organism=Clytia hemisphaerica|type=transcript|length=925bp|location=Sequence derived from alignment at sc0002260:13966..14890+ (Clytia hemisphaerica)
GAAGAAACTATTGATGCTAGTTTTTGAAGAGAGAGCACATTGATCCTGGG
TTTGTAAACCTTCAAATACGACTCCCTGCCCCGATTCCCCAGACTCCAGA
GATTTTCTTGTTTTGTGCCCGGGGATtttaacataactttttgatACTTA
AGCCGGACTGGATGCGCGATCCCTGCGACGTACCTAAACTATCAGGTGAT
TGCCTAGGCGGGCTTCAATTTCACAATCTCTATTCTGCCCGCTTTCTGCA
TGGTTTGTTTGTCAGGGCtataggaaatatttttttcgttcCTCGCCCGG
GACATTTGGCCCATTAGTGTTGCGAGCCTGATCCCATAAAACCATATTTT
ACTTGCGAACACACGTCCACTTATGCGGCCTTGCAGTTCACTTATCTCGC
TGCACGGTTTGTTTGTCCGggaatagaaattttttttcgttcccCCGACA
TTTGCCCCATCACGCCCCATCTTGCCCAGTGTTGCAAGCTCAATCCCATA
AAACCATATTTTAGCTATGAACGGAAATCCCcgttagaaaaaatcaaaac
atcgatAAGTGGTTAAACTTTCTAAATAACTTTGCTAAATCAAAACACGG
GAAAACATCATGCGACGTATGACCACAACTCCCGCTCGCttcaatcaaga
atttggtCACATGATCTGCCAGCAAAAATCGACCAATGAAATCGTTTTTC
TATATAtcttcttttgtaaaaaaacaaNTCAAGAATTTGGTCACGTGATC
TGCCAGCAAAAATCGATATCTATAtatcttttttgtaaaaaaacaagAAC
CTTCTCACTTCCAAATGTTATGTCcagcagtgtagacctaaagctctaaa
ccagcatctaataacatgaaaaccagaatatgattcttcaatgggaatca
aaactataaagtgcacttacaaaca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039975-exon-sc0002260-1491911889:13966..14625 | TCONS_00039975-exon-sc0002260-1491911889:13966..14625 | Clytia hemisphaerica | exon |
| TCONS_00039975-exon-sc0002260-1510915933:13966..14625 | TCONS_00039975-exon-sc0002260-1510915933:13966..14625 | Clytia hemisphaerica | exon |
| TCONS_00039975-exon-sc0002260-1575043694:13966..14625 | TCONS_00039975-exon-sc0002260-1575043694:13966..14625 | Clytia hemisphaerica | exon |
| TCONS_00039975-exon-sc0002260-1491911889:14710..14890 | TCONS_00039975-exon-sc0002260-1491911889:14710..14890 | Clytia hemisphaerica | exon |
| TCONS_00039975-exon-sc0002260-1510915933:14710..14890 | TCONS_00039975-exon-sc0002260-1510915933:14710..14890 | Clytia hemisphaerica | exon |
| TCONS_00039975-exon-sc0002260-1575043694:14710..14890 | TCONS_00039975-exon-sc0002260-1575043694:14710..14890 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002260 | supercontig | sc0002260:13966..14890 + |
Blast
The following BLAST results are available for this feature:
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