TCONS_00039967 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039967
Unique NameTCONS_00039967
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length212

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039967 ID=TCONS_00039967|Name=TCONS_00039967|organism=Clytia hemisphaerica|type=transcript|length=212bp
TGAAGAATGCGAAATAGTGTTGAACATAACAGTAAGTAGTTGCCCCTGTA
TTTTCAATATAAAACCTGTTTTTGTTATgtatttataaataaaaaatgcc
tATTTCCACAAGAAAGTTTGAAGATATGATAAACGCATGATAAGTAATAT
GGTAGTCTTTTGATGAACTAATCATTTTGCTGAATGTTattcaatgtttt
caaaatatgcTT
Run BLAST on NCBI

transcript from alignment at sc0002257:12922..13133

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039967 ID=TCONS_00039967|Name=TCONS_00039967|organism=Clytia hemisphaerica|type=transcript|length=212bp|location=Sequence derived from alignment at sc0002257:12922..13133 (Clytia hemisphaerica)
AAgcatattttgaaaacattgaatAACATTCAGCAAAATGATTAGTTCAT
CAAAAGACTACCATATTACTTATCATGCGTTTATCATATCTTCAAACTTT
CTTGTGGAAATaggcattttttatttataaatacATAACAAAAACAGGTT
TTATATTGAAAATACAGGGGCAACTACTTACTGTTATGTTCAACACTATT
TCGCATTCTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024204XLOC_024204Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039967-exon-sc0002257-1491911889:12922..13133TCONS_00039967-exon-sc0002257-1491911889:12922..13133Clytia hemisphaericaexon
TCONS_00039967-exon-sc0002257-1510915933:12922..13133TCONS_00039967-exon-sc0002257-1510915933:12922..13133Clytia hemisphaericaexon
TCONS_00039967-exon-sc0002257-1575043694:12922..13133TCONS_00039967-exon-sc0002257-1575043694:12922..13133Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002257supercontigsc0002257:12922..13133 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039967 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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