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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039956 ID=TCONS_00039956|Name=TCONS_00039956|organism=Clytia hemisphaerica|type=transcript|length=395bp
GggtgttttaatttttttaatttcttttagtTTCAGAATTACCAAAGGGA
GATAAACCAAACGAAATTATTAACCTTGAACAACATGAACAACAGTCCAC
CACTTCCCTGATGAAGATTTAAAATCCCAACATCAAACTAGTTAATGAAA
TAGAGCACAAAATTCGTTTGATTCTCAAGAAAGATGACAAGTTAGGGGCA
TTTGCTGATATCTGTTTATGACGTTTATAAATCACTGGGTATTGTGGTCA
TGCTATTCTTATAAAGCCTATGGCAACTTTTTAGgTGGAAGTCCAAGAAA
ACATCAACTGCCAATCGGTCAACTACGTTCAATTATCAACTGCTAGAACT
AAATTGTGTTAAGGCTTTTCCTAGCTACCATTAACTACAAATTGT Run BLAST on NCBI transcript from alignment at sc0002256:25287..26222- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039956 ID=TCONS_00039956|Name=TCONS_00039956|organism=Clytia hemisphaerica|type=transcript|length=936bp|location=Sequence derived from alignment at sc0002256:25287..26222- (Clytia hemisphaerica)
GGGTGTTTTAATTTTTTTAATTTCTTTTAGTTTCAGAATTACCAAAGGGA
GATAAACCAAACGAAATTATTAACCTTGAACAACATGAACAACAGTCCAC
CACTTCCCTGATGAAGATTTAAAATCCCAACATCAAACTAGTTAATGAAA
TAGAGCACAAAATTCGGTAAATTATTATTTTCATCATTGGGATTGCACTA
TATTCCCTTTCTTCCTCGAGATAACAAAGGCAAGGCAAAAAGTTTTTGAG
CAGTGCTCACGCGAAATGTTAGTTAANCAAAGGCAAGGCAAAAAGTTTTT
GAGCAGTGCTCACGCGAAATGTTAGTTATTTACTATGGAACACTAAAGAA
AAACTTTGGGTACTTATGTACATAAAGACCAGTAAAAATGTTGACATCTT
TCCTTTGTCTTTCTTCAGTTTGATTCTCAAGAAAGATGACAAGTTAGGGG
CATTTGCTGATATCTGTTTATGACGTTTATAAATCACTGGGTATTGTGGT
CATGCTATTCTTATAAAGCCTATGGCAACTTTTTAGGTGAGTTTGAATTA
TGTCATATTAAGAGCGATTCATTATCTTGAATCTTCAGACGTCTTCAGAA
TTTCTAAATTTACTGCTAATATCGAAATGCTAAAGAAAAATAGCTAGTCT
ATAAAGTAAAACGATATATCACTGAATGCCTTACCATGTTACAGAACAAG
ATTTTTTCAAACATTTTCCTAAATTAGTCTCAAAGTAGTTTGTATTCTAT
AGTGCTATCATCAAGGTGGATCAGCATTTTGTTCCGTTCTAAATCATTTC
TAAAAATTTTTATTGTTTTTATTAGGTGGAAGTCCAAGAAAACATCAACT
GCCAATCGGTCAACTACGTTCAATTATCAACTGCTAGAACTAAATTGTGT
TAAGGCTTTTCCTAGCTACCATTAACTACAAATTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039956-exon-sc0002256-1575043694:26057..26222 | TCONS_00039956-exon-sc0002256-1575043694:26057..26222 | Clytia hemisphaerica | exon |
| TCONS_00039956-exon-sc0002256-1575043694:25687..25804 | TCONS_00039956-exon-sc0002256-1575043694:25687..25804 | Clytia hemisphaerica | exon |
| TCONS_00039956-exon-sc0002256-1575043694:25287..25397 | TCONS_00039956-exon-sc0002256-1575043694:25287..25397 | Clytia hemisphaerica | exon |
| TCONS_00039956-exon-sc0002256-1510915933:26057..26222 | TCONS_00039956-exon-sc0002256-1510915933:26057..26222 | Clytia hemisphaerica | exon |
| TCONS_00039956-exon-sc0002256-1510915933:25687..25804 | TCONS_00039956-exon-sc0002256-1510915933:25687..25804 | Clytia hemisphaerica | exon |
| TCONS_00039956-exon-sc0002256-1510915933:25287..25397 | TCONS_00039956-exon-sc0002256-1510915933:25287..25397 | Clytia hemisphaerica | exon |
| TCONS_00039956-exon-sc0002256-1491911889:26057..26222 | TCONS_00039956-exon-sc0002256-1491911889:26057..26222 | Clytia hemisphaerica | exon |
| TCONS_00039956-exon-sc0002256-1491911889:25687..25804 | TCONS_00039956-exon-sc0002256-1491911889:25687..25804 | Clytia hemisphaerica | exon |
| TCONS_00039956-exon-sc0002256-1491911889:25287..25397 | TCONS_00039956-exon-sc0002256-1491911889:25287..25397 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002256 | supercontig | sc0002256:25287..26222 - |
Blast
The following BLAST results are available for this feature:
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