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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039933 ID=TCONS_00039933|Name=TCONS_00039933|organism=Clytia hemisphaerica|type=transcript|length=1028bp
GTGGTCTAGCTCTATACTTTCTCAGTCACGCTCGATTTCCtcctttcact
ttcgatttttcAATCTCCTCCAGAACAACATTGAGATCCCAAGGTTGAGC
CTTACTATAGCATTTTCGATCCTAACTTTTTGTCCCAATTCATACCTTAG
GAACCTTTTTACTATTTCATCATGCTGGACTTGCTTCCTTCCTTTCCTAG
GTTCTATTTCTCTGCCACTTTCAGTTTTTGGACTTCTTTTAGTCAGCTCT
AAGGTCCCATGTTTAAACAACCCTACTATAGTTACTTTCAACTTCAACTG
ATCTCAAACAGCAACATTTCACTGCACTACTATATCGTCCACACACCCCG
AACTCTGCTTAACTTGGTCTCTGCCACATTTCGCTAAATGCTCAGAGcgt
gttattataatatgggtataAGTACTCCTCTTtaaaacctgactgaaatt
cgagccgttactagcaaccctgcggggcccaaggcgccgagtatgcaccc
ggcacagtgacaagccgttactagcaaccctgaccctacctccTTTTTCC
CCTGAATCACCgaatgacggataggaaaaattatcGGGAAAAAATGCTCG
TCGCGCTCTGACTAATCAGCTAAATCTTCTCTGCTGACTCTCCACCATCT
TGATGTGGTCTAGCTCTATACTTTCTCAGTCACGCTCGATTTCCtccttt
cactttcgatttTTCAATCTCCTCCAGAACAACATTGAGATCCCAAGGTT
GAGCCTTACTAAAGCACTTCCGATCCTAACTTTTCACTCTGAACAGCAAT
ACACCATTTGGGTCTTCTACTCTAGAGCTCATGCCATGCTCTCTTGTCCT
CTACATCGTCCTGATTTTTCACTATTGCTCCTTTCCAATTTCGATTCCTC
ACCTTCACTTTCTCGATTTTTTCCATCACAACACTACTATCCCAAGTTCG
AACCCGACTGGAACACTTCCGATTTCAACTCACCTACTCGAAATAGCAGC
ACTCCAATGCACAATTCTGGTCTCCCAC Run BLAST on NCBI transcript from alignment at sc0002247:9316..10343 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039933 ID=TCONS_00039933|Name=TCONS_00039933|organism=Clytia hemisphaerica|type=transcript|length=1028bp|location=Sequence derived from alignment at sc0002247:9316..10343 (Clytia hemisphaerica)
GTGGGAGACCAGAATTGTGCATTGGAGTGCTGCTATTTCGAGTAGGTGAG
TTGAAATCGGAAGTGTTCCAGTCGGGTTCGAACTTGGGATAGTAGTGTTG
TGATGGAAAAAATCGAGAAAGTGAAGGTGAGGAATCGAAATTGGAAAGGA
GCAATAGTGAAAAATCAGGACGATGTAGAGGACAAGAGAGCATGGCATGA
GCTCTAGAGTAGAAGACCCAAATGGTGTATTGCTGTTCAGAGTGAAAAGT
TAGGATCGGAAGTGCTTTAGTAAGGCTCAACCTTGGGATCTCAATGTTGT
TCTGGAGGAGATTGAAaaatcgaaagtgaaaggaGGAAATCGAGCGTGAC
TGAGAAAGTATAGAGCTAGACCACATCAAGATGGTGGAGAGTCAGCAGAG
AAGATTTAGCTGATTAGTCAGAGCGCGACGAGCATTTTTTCCCgataatt
tttcctatccgtcattcGGTGATTCAGGGGAAAAAggaggtagggtcagg
gttgctagtaacggcttgtcactgtgccgggtgcatactcggcgccttgg
gccccgcagggttgctagtaacggctcgaatttcagtcaggttttaAAGA
GGAGTACTtatacccatattataataacacgCTCTGAGCATTTAGCGAAA
TGTGGCAGAGACCAAGTTAAGCAGAGTTCGGGGTGTGTGGACGATATAGT
AGTGCAGTGAAATGTTGCTGTTTGAGATCAGTTGAAGTTGAAAGTAACTA
TAGTAGGGTTGTTTAAACATGGGACCTTAGAGCTGACTAAAAGAAGTCCA
AAAACTGAAAGTGGCAGAGAAATAGAACCTAGGAAAGGAAGGAAGCAAGT
CCAGCATGATGAAATAGTAAAAAGGTTCCTAAGGTATGAATTGGGACAAA
AAGTTAGGATCGAAAATGCTATAGTAAGGCTCAACCTTGGGATCTCAATG
TTGTTCTGGAGGAGATTgaaaaatcgaaagtgaaaggaGGAAATCGAGCG
TGACTGAGAAAGTATAGAGCTAGACCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039933-exon-sc0002247-1491911889:9316..10343 | TCONS_00039933-exon-sc0002247-1491911889:9316..10343 | Clytia hemisphaerica | exon |
| TCONS_00039933-exon-sc0002247-1510915933:9316..10343 | TCONS_00039933-exon-sc0002247-1510915933:9316..10343 | Clytia hemisphaerica | exon |
| TCONS_00039933-exon-sc0002247-1575043694:9316..10343 | TCONS_00039933-exon-sc0002247-1575043694:9316..10343 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002247 | supercontig | sc0002247:9316..10343 . |
Blast
The following BLAST results are available for this feature:
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