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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039927 ID=TCONS_00039927|Name=TCONS_00039927|organism=Clytia hemisphaerica|type=transcript|length=1057bp
CGGGGGTTAAGGGTATGtttttcaaaatatcagaaatgcactgtaagggt
ggacttttgataaatgcactgtaagggtggaaatttcagcaaatctggga
aaaattgctaatttttgctcgaaaatgttgattttttttgctctaaaaga
atttgaaaaaatgcactgtaagggtatgaatttcaccgatttttctctgc
actgtaagtgtgcgattctaaaagccaattttttcgccgcacataccgtc
agttggtaaacccactgccccccggGATAAAGTCGCTaccggtaaggttc
taattggACTATATCCTGACCAATTGTGGACGACATTTTACGGGTTAGAA
GTGCAAATTATTccaaatacataaacttgccACTATTAATGTGACGCAGA
GGTAAACACATGTACGACTCATCCATCTTGAGTTTTCACGCTAAAATATC
TTCATCTTTTCACAGATTGCGGATGGTTCAAAGGATAGGAAGTGTTCCAC
ATCCTTCCTGCATTTCTGTCATTCGAAATGTTGAACAGCACAAGTACAAC
TTTTGAACTTCTGGTTCAATGATGGTCGTTTCCAGTGGTGTATTCGCAGA
ACTTGCTTCGTGGACACACTACGTGGTCACACTATAACAAATGAGAAATT
GCTGAAGGTTAGAGGTGGATTTTCTTTTTAGGATTTGTAGCCATTTATTT
CCTGTGTGAGTTACACATAAATGCACAAATGCTAAAATGGATGTAACATT
TCCAccggatttttgaaaatttgccgCGCAAATAGATTCAATCTATATCC
CAAAGTGCAACGCAAGTTCTGATTTGATCGCCATCTTTCTGCCAACCATT
ATTCTCGAGCAATGTAGCAGCATGTGATTTGATGATCTCGGTTCGATTTG
GAGTTTTTAGTAGTATTGCCTTGAAAAGAATACGGAATACTTGCAAAGCA
TCTAAACCAATCTTCATTGCTACAACCTGAAACTGAACATCTTGTTATCG
AAGTCGTTGCGCTGTTCAAACGACTACAGGttcaaaaaattgacgtcaca
aacaaaa Run BLAST on NCBI transcript from alignment at sc0002246:919..1975 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039927 ID=TCONS_00039927|Name=TCONS_00039927|organism=Clytia hemisphaerica|type=transcript|length=1057bp|location=Sequence derived from alignment at sc0002246:919..1975 (Clytia hemisphaerica)
ttttgtttgtgacgtcaattttttgaaCCTGTAGTCGTTTGAACAGCGCA
ACGACTTCGATAACAAGATGTTCAGTTTCAGGTTGTAGCAATGAAGATTG
GTTTAGATGCTTTGCAAGTATTCCGTATTCTTTTCAAGGCAATACTACTA
AAAACTCCAAATCGAACCGAGATCATCAAATCACATGCTGCTACATTGCT
CGAGAATAATGGTTGGCAGAAAGATGGCGATCAAATCAGAACTTGCGTTG
CACTTTGGGATATAGATTGAATCTATTTGCGcggcaaattttcaaaaatc
cggTGGAAATGTTACATCCATTTTAGCATTTGTGCATTTATGTGTAACTC
ACACAGGAAATAAATGGCTACAAATCCTAAAAAGAAAATCCACCTCTAAC
CTTCAGCAATTTCTCATTTGTTATAGTGTGACCACGTAGTGTGTCCACGA
AGCAAGTTCTGCGAATACACCACTGGAAACGACCATCATTGAACCAGAAG
TTCAAAAGTTGTACTTGTGCTGTTCAACATTTCGAATGACAGAAATGCAG
GAAGGATGTGGAACACTTCCTATCCTTTGAACCATCCGCAATCTGTGAAA
AGATGAAGATATTTTAGCGTGAAAACTCAAGATGGATGAGTCGTACATGT
GTTTACCTCTGCGTCACATTAATAGTggcaagtttatgtatttggAATAA
TTTGCACTTCTAACCCGTAAAATGTCGTCCACAATTGGTCAGGATATAGT
ccaattagaaccttaccggtAGCGACTTTATCccggggggcagtgggttt
accaactgacggtatgtgcggcgaaaaaattggcttttagaatcgcacac
ttacagtgcagagaaaaatcggtgaaattcatacccttacagtgcatttt
ttcaaattcttttagagcaaaaaaaatcaacattttcgagcaaaaattag
caatttttcccagatttgctgaaatttccacccttacagtgcatttatca
aaagtccacccttacagtgcatttctgatattttgaaaaaCATACCCTTA
ACCCCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039927-exon-sc0002246-1491911889:919..1975 | TCONS_00039927-exon-sc0002246-1491911889:919..1975 | Clytia hemisphaerica | exon |
| TCONS_00039927-exon-sc0002246-1510915933:919..1975 | TCONS_00039927-exon-sc0002246-1510915933:919..1975 | Clytia hemisphaerica | exon |
| TCONS_00039927-exon-sc0002246-1575043694:919..1975 | TCONS_00039927-exon-sc0002246-1575043694:919..1975 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002246 | supercontig | sc0002246:919..1975 . |
Blast
The following BLAST results are available for this feature:
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