TCONS_00039922 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039922
Unique NameTCONS_00039922
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3533

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039922 ID=TCONS_00039922|Name=TCONS_00039922|organism=Clytia hemisphaerica|type=transcript|length=3533bp
GGGAAAACTTCTAAATCTTCTTACATTATAATTTACgagaataaaaaaat
tcacgggTGTTTTTTGGATATATAGCCGCTCTCAACCATTTACTACTAGG
TGTCATCATCTTAGAAGTACAGTTCGCTTCTAGAAATTTATACAAGTTTT
CTATCAAATATATCAATGATAGCTTTCTTAAACAAGACCATATTTCGAAG
GATGGTTATTATCTCGTCCCGTGCTCTACTGCCATCGTTTTTCAGTGTTT
GAAATTGTTTATGCGCAATGGCGTAAAGTTCAATCCAGTCAGTTAGAATT
TCATCCTCGCTAGCATGAAGCATGGGTATCATATCGAAATCGTTCATCAT
AAACTTTATGTAGGATAGTATGAAAGATATGTGACGGTTCGGAAGACAGT
CTTCATCATTCGGTAACAATGCCCTCGCTTCGTGATGTCTGTGAAGCTTG
ATAAGAATTAAAGCTTTTCTGTTTCTGAAGTCAGCGCCTTGTTTGTATGG
CAGCGAACTCTTTTCTATAATATTCAACGCGTCTTGATATCTTTTTAGGA
CAAGTAAAAACCTAGCTTTTAAGAGGTTGAACCTCTGTCTGTAAGCATGA
TTAAGTGGAATGTTATTACTcattaaaaattgttcaaattctTCAATCAG
TTTACCAACTCTTTTGAAATTTATGTTCTTAATCGATATCCTTATTTCAG
TATCGAGCATTAGGTATTTATCATCAACGGTTAAGTCAGAAATCGAAAGA
CTTCCAAGAATAGTTTCAGCCTTTTTGTTGTCACCATCGTTCACGAAATA
ATTGGCAAGCTTCAATTTAATGCTGTTCATACCAGTCACAGAAATGAGAC
AATCGTACACTTCATTGATTCTGTTCGAAAAAGATTTGTACTCTTTTCCT
TTCAAGTGATTAAATGCAAAGGCTATTCGGATTTTGTATGAGAATACTTC
TTCGTGATGTTTGGCCAGTTCATTTTCAAATTCCCTCTCAAATTTTTGAA
CATCCTCCAATTCAATCTTTTCATCATTACTATACATGATTTCCAGTCTC
AAATTTTTCAGCTCCAACGCACTGATGAAATCGTAAGTAATGCCATACAC
TTTTAGACATTCTTCATTGTTGATATAGTAATTCTTCATAAACGGAATGT
CAAATCTCGAATCTGCAGTCCGAAACAAAGTAGTAATGTTAATGATTATT
TTACCAAGCAGATGTTTCTCATTCAGTACATTCCAAAGATTTTTTGTATG
GATGTACCAAAGATCTTTTTCATCCGTATGAAATTCATCTTTAGAAAAAG
CCATAGCGATGTTATTTAGGAGCTCTTTCAACATCAGTGCTATCTCATTA
ATCGAAGTTTTAAAAACTCCTGTTTCCAAAGAGATGCAAATAACTTTTTG
CACAAGAGCATGAATATGTAGATGGCTTTCAGATTGTTGGACCAACGAAA
GAGAACAGATCTCATCCAAAATTTCATTTAGCTCAATCTCGTCGCTGACT
TCCctgaaataaagaaaagtcTCTTTTTTAATGCAACTATTATCCATAAA
AGCCATCATTGCCAAGACATTCCAAGCTTTTGGAGAGGACTTCAATTGTT
CAAAAGCCAATGACCAGACGGTCAACAATGTCTTATCATAATCTGAAAGC
TTTTTCTTTGGATGTAGCAATGACGAGTTTGATTCTTTGAAACTTGAGAT
GTAAGTGGAGATTTTTGTTCCATGTTTTTTTATGTAACTCACAGCCTGTT
GCAAAACTAGAGGGAATGATTGTAATTCTTCAGCCAATGAATCAATCTCT
TCCCGAGTGGCGTTTGGTAAATTATCTCTCAAAAATAGTTTCCCTTCTTC
ACTTTCAAAAAGTTGCAGTTTGTAGAGAACAATTTTGGGATCATCAAATT
CATTCAATTGTGTTGTTAATAGTATTGAGATTCTTTGTGAGGACACATTA
CCAaggaaagttttcaaatcgtttAAATGTTCTTCAAAAACATCATCAAT
CACGAACAAGACTTTTTCACCATCTAGATGTTTTGTTAAAAGTTGGCAAA
CCAAAACCAGAGACTCTTTCAGAGGTACTACCTCTTTTGAAATCATATAA
AGAATTTCACATACAGTTTTATGTAAAGACTTTGCGTTTATCCAAAATAT
CTTATCGTAACCGTGTTTGTTCACATCAATGAATTTTGCAGCTGTCTGTG
TTTTGCCTGTCCCACCCAAAGCTGAAATAGCAACACAATTCGAAGAGTCA
AATATAGCTTCAATGTCTTTGATGACTTTTTCTCTTCCAAAGAAATTAGC
AACAGGTAATCTTAAATCCCAGTAGAATGGTTGTTTTTGCGCAACCTCAA
CTGTGATGCTTTTGATTGAGTCGATCATCTCTTCCAAGCTTTTGATTTTG
AGCTTCAAAGCTTTGATTTCAAACGCATTGTCTGTCGCTTGATTACTTAG
AGAATCCAAAtcgtgtttaaaatttttcactaTCTTTAGGATTTCTGCAt
tgtatttatccaatgaactGGTTCTCAAATCATGGAACAATGCCATGTTT
TGGTATTTCAACCCAAGTAGGATGGTTTCAATCTTATTCCAACAAATATT
AAATTGTACCACCGTGTCCAAATCTGCTGCACTCCCATGTTTGATTTCAT
TTCGAAGCTGTCTTGCTCGATCAACAAAAGCAGCTTTGCTTTGATCAGTC
GATTTTACTTTCTTCCAACCACCTGATGGTTTAAGATTTGTTTCATTGCG
AATAACAGCAACGATCAATGTTATATCCCAATCCTTTGAgtctgtttgtt
gtttgttctGAGGACATAATTTATCCCATGCATCCTGTCCATATTTAGTA
TTTCGTTTGCATGTCAACATATGTTGGTAAAGTTGACCTGGGTTTTGTGG
TAATCCTTGGTAAACTGGATCGTTGTCCAGATTGTGTAGAATAGACAGGA
GAGCATCTTTGACACAAAATTCGAGAGCAAGATTTACTCTGATCCAACAA
TCACTTTTTGTGACAACATTTTGCTGAGTGGAACTCATCGCTTGAATGTT
AAATTCTTTTCCAATttcatattaaaaaaatcatccttaTCACTTTAGAC
TTCGTAGAGGACGGACACGCTCCGAGCTCTGATTTGTTGTTGCGATTACT
CATTTAATATTTACGAAGTCTAAGTGATAATACTTTTTATTGAAAAGGGT
GTGACCAACAATTTTATTTTTATTTTCATAATATATTTCGGGAGATTCTT
CCCATCATCAGATTTAATAtctaaaaacaaatataaaaacagtttaaaaa
cagtagaaaattcaaaacatatacaACTTCGTAAAAAGCATCCTCATACA
ACAACCTTCCCATAAATActaaaaacatgtttaaaaaatcgagaaatcag
aaaattagaaaccaatacACCCTGAATACATAAAGCGaaacgaaaaatta
aaaatgaataaaagaaCAATTATATTTTTAGCACTAACGCGCGGCTTTTG
TATTCGTCCTTTGTGTTCAATTCAGGTTTTAAG
Run BLAST on NCBI

protein sequence of TCONS_00039922-protein

>TCONS_00039922-protein ID=TCONS_00039922-protein|Name=TCONS_00039922-protein|organism=Clytia hemisphaerica|type=polypeptide|length=966bp
MSSTQQNVVTKSDCWIRVNLALEFCVKDALLSILHNLDNDPVYQGLPQNP
GQLYQHMLTCKRNTKYGQDAWDKLCPQNKQQTDSKDWDITLIVAVIRNET
NLKPSGGWKKVKSTDQSKAAFVDRARQLRNEIKHGSAADLDTVVQFNICW
NKIETILLGLKYQNMALFHDLRTSSLDKYNAEILKIVKNFKHDLDSLSNQ
ATDNAFEIKALKLKIKSLEEMIDSIKSITVEVAQKQPFYWDLRLPVANFF
GREKVIKDIEAIFDSSNCVAISALGGTGKTQTAAKFIDVNKHGYDKIFWI
NAKSLHKTVCEILYMISKEVVPLKESLVLVCQLLTKHLDGEKVLFVIDDV
FEEHLNDLKTFLGNVSSQRISILLTTQLNEFDDPKIVLYKLQLFESEEGK
LFLRDNLPNATREEIDSLAEELQSFPLVLQQAVSYIKKHGTKISTYISSF
KESNSSLLHPKKKLSDYDKTLLTVWSLAFEQLKSSPKAWNVLAMMAFMDN
SCIKKETFLYFREVSDEIELNEILDEICSLSLVQQSESHLHIHALVQKVI
CISLETGVFKTSINEIALMLKELLNNIAMAFSKDEFHTDEKDLWYIHTKN
LWNVLNEKHLLGKIIINITTLFRTADSRFDIPFMKNYYINNEECLKVYGI
TYDFISALELKNLRLEIMYSNDEKIELEDVQKFEREFENELAKHHEEVFS
YKIRIAFAFNHLKGKEYKSFSNRINEVYDCLISVTGMNSIKLKLANYFVN
DGDNKKAETILGSLSISDLTVDDKYLMLDTEIRISIKNINFKRVGKLIEE
FEQFLMSNNIPLNHAYRQRFNLLKARFLLVLKRYQDALNIIEKSSLPYKQ
GADFRNRKALILIKLHRHHEARALLPNDEDCLPNRHISFILSYIKFMMND
FDMIPMLHASEDEILTDWIELYAIAHKQFQTLKNDGSRARDEIITILRNM
VLFKKAIIDIFDRKLV
Run BLAST on NCBI

transcript from alignment at sc0002243:12327..15859

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039922 ID=TCONS_00039922|Name=TCONS_00039922|organism=Clytia hemisphaerica|type=transcript|length=3533bp|location=Sequence derived from alignment at sc0002243:12327..15859 (Clytia hemisphaerica)
CTTAAAACCTGAATTGAACACAAAGGACGAATACAAAAGCCGCGCGTTAG
TGCTAAAAATATAATTGttcttttattcatttttaatttttcgtttCGCT
TTATGTATTCAGGGTgtattggtttctaattttctgatttctcgattttt
taaacatgtttttagTATTTATGGGAAGGTTGTTGTATGAGGATGCTTTT
TACGAAGTtgtatatgttttgaattttctactgtttttaaactgttttta
tatttgtttttagaTATTAAATCTGATGATGGGAAGAATCTCCCGAAATA
TATTATGAAAATAAAAATAAAATTGTTGGTCACACCCTTTTCAATAAAAA
GTATTATCACTTAGACTTCGTAAATATTAAATGAGTAATCGCAACAACAA
ATCAGAGCTCGGAGCGTGTCCGTCCTCTACGAAGTCTAAAGTGAtaagga
tgatttttttaatatgaaATTGGAAAAGAATTTAACATTCAAGCGATGAG
TTCCACTCAGCAAAATGTTGTCACAAAAAGTGATTGTTGGATCAGAGTAA
ATCTTGCTCTCGAATTTTGTGTCAAAGATGCTCTCCTGTCTATTCTACAC
AATCTGGACAACGATCCAGTTTACCAAGGATTACCACAAAACCCAGGTCA
ACTTTACCAACATATGTTGACATGCAAACGAAATACTAAATATGGACAGG
ATGCATGGGATAAATTATGTCCTCagaacaaacaacaaacagacTCAAAG
GATTGGGATATAACATTGATCGTTGCTGTTATTCGCAATGAAACAAATCT
TAAACCATCAGGTGGTTGGAAGAAAGTAAAATCGACTGATCAAAGCAAAG
CTGCTTTTGTTGATCGAGCAAGACAGCTTCGAAATGAAATCAAACATGGG
AGTGCAGCAGATTTGGACACGGTGGTACAATTTAATATTTGTTGGAATAA
GATTGAAACCATCCTACTTGGGTTGAAATACCAAAACATGGCATTGTTCC
ATGATTTGAGAACCagttcattggataaatacaaTGCAGAAATCCTAAAG
AtagtgaaaaattttaaacacgaTTTGGATTCTCTAAGTAATCAAGCGAC
AGACAATGCGTTTGAAATCAAAGCTTTGAAGCTCAAAATCAAAAGCTTGG
AAGAGATGATCGACTCAATCAAAAGCATCACAGTTGAGGTTGCGCAAAAA
CAACCATTCTACTGGGATTTAAGATTACCTGTTGCTAATTTCTTTGGAAG
AGAAAAAGTCATCAAAGACATTGAAGCTATATTTGACTCTTCGAATTGTG
TTGCTATTTCAGCTTTGGGTGGGACAGGCAAAACACAGACAGCTGCAAAA
TTCATTGATGTGAACAAACACGGTTACGATAAGATATTTTGGATAAACGC
AAAGTCTTTACATAAAACTGTATGTGAAATTCTTTATATGATTTCAAAAG
AGGTAGTACCTCTGAAAGAGTCTCTGGTTTTGGTTTGCCAACTTTTAACA
AAACATCTAGATGGTGAAAAAGTCTTGTTCGTGATTGATGATGTTTTTGA
AGAACATTTaaacgatttgaaaactttcctTGGTAATGTGTCCTCACAAA
GAATCTCAATACTATTAACAACACAATTGAATGAATTTGATGATCCCAAA
ATTGTTCTCTACAAACTGCAACTTTTTGAAAGTGAAGAAGGGAAACTATT
TTTGAGAGATAATTTACCAAACGCCACTCGGGAAGAGATTGATTCATTGG
CTGAAGAATTACAATCATTCCCTCTAGTTTTGCAACAGGCTGTGAGTTAC
ATAAAAAAACATGGAACAAAAATCTCCACTTACATCTCAAGTTTCAAAGA
ATCAAACTCGTCATTGCTACATCCAAAGAAAAAGCTTTCAGATTATGATA
AGACATTGTTGACCGTCTGGTCATTGGCTTTTGAACAATTGAAGTCCTCT
CCAAAAGCTTGGAATGTCTTGGCAATGATGGCTTTTATGGATAATAGTTG
CATTAAAAAAGAgacttttctttatttcagGGAAGTCAGCGACGAGATTG
AGCTAAATGAAATTTTGGATGAGATCTGTTCTCTTTCGTTGGTCCAACAA
TCTGAAAGCCATCTACATATTCATGCTCTTGTGCAAAAAGTTATTTGCAT
CTCTTTGGAAACAGGAGTTTTTAAAACTTCGATTAATGAGATAGCACTGA
TGTTGAAAGAGCTCCTAAATAACATCGCTATGGCTTTTTCTAAAGATGAA
TTTCATACGGATGAAAAAGATCTTTGGTACATCCATACAAAAAATCTTTG
GAATGTACTGAATGAGAAACATCTGCTTGGTAAAATAATCATTAACATTA
CTACTTTGTTTCGGACTGCAGATTCGAGATTTGACATTCCGTTTATGAAG
AATTACTATATCAACAATGAAGAATGTCTAAAAGTGTATGGCATTACTTA
CGATTTCATCAGTGCGTTGGAGCTGAAAAATTTGAGACTGGAAATCATGT
ATAGTAATGATGAAAAGATTGAATTGGAGGATGTTCAAAAATTTGAGAGG
GAATTTGAAAATGAACTGGCCAAACATCACGAAGAAGTATTCTCATACAA
AATCCGAATAGCCTTTGCATTTAATCACTTGAAAGGAAAAGAGTACAAAT
CTTTTTCGAACAGAATCAATGAAGTGTACGATTGTCTCATTTCTGTGACT
GGTATGAACAGCATTAAATTGAAGCTTGCCAATTATTTCGTGAACGATGG
TGACAACAAAAAGGCTGAAACTATTCTTGGAAGTCTTTCGATTTCTGACT
TAACCGTTGATGATAAATACCTAATGCTCGATACTGAAATAAGGATATCG
ATTAAGAACATAAATTTCAAAAGAGTTGGTAAACTGATTGAagaatttga
acaatttttaatgAGTAATAACATTCCACTTAATCATGCTTACAGACAGA
GGTTCAACCTCTTAAAAGCTAGGTTTTTACTTGTCCTAAAAAGATATCAA
GACGCGTTGAATATTATAGAAAAGAGTTCGCTGCCATACAAACAAGGCGC
TGACTTCAGAAACAGAAAAGCTTTAATTCTTATCAAGCTTCACAGACATC
ACGAAGCGAGGGCATTGTTACCGAATGATGAAGACTGTCTTCCGAACCGT
CACATATCTTTCATACTATCCTACATAAAGTTTATGATGAACGATTTCGA
TATGATACCCATGCTTCATGCTAGCGAGGATGAAATTCTAACTGACTGGA
TTGAACTTTACGCCATTGCGCATAAACAATTTCAAACACTGAAAAACGAT
GGCAGTAGAGCACGGGACGAGATAATAACCATCCTTCGAAATATGGTCTT
GTTTAAGAAAGCTATCATTGATATATTTGATAGAAAACTTGTATAAATTT
CTAGAAGCGAACTGTACTTCTAAGATGATGACACCTAGTAGTAAATGGTT
GAGAGCGGCTATATATCCAAAAAACAcccgtgaatttttttattctcGTA
AATTATAATGTAAGAAGATTTAGAAGTTTTCCC

Coding sequence (CDS) from alignment at sc0002243:12327..15859

>TCONS_00039922 ID=TCONS_00039922|Name=TCONS_00039922|organism=Clytia hemisphaerica|type=CDS|length=2901bp|location=Sequence derived from alignment at sc0002243:12327..15859 (Clytia hemisphaerica)
ATGAGTTCCACTCAGCAAAATGTTGTCACAAAAAGTGATTGTTGGATCAG
AGTAAATCTTGCTCTCGAATTTTGTGTCAAAGATGCTCTCCTGTCTATTC
TACACAATCTGGACAACGATCCAGTTTACCAAGGATTACCACAAAACCCA
GGTCAACTTTACCAACATATGTTGACATGCAAACGAAATACTAAATATGG
ACAGGATGCATGGGATAAATTATGTCCTCagaacaaacaacaaacagacT
CAAAGGATTGGGATATAACATTGATCGTTGCTGTTATTCGCAATGAAACA
AATCTTAAACCATCAGGTGGTTGGAAGAAAGTAAAATCGACTGATCAAAG
CAAAGCTGCTTTTGTTGATCGAGCAAGACAGCTTCGAAATGAAATCAAAC
ATGGGAGTGCAGCAGATTTGGACACGGTGGTACAATTTAATATTTGTTGG
AATAAGATTGAAACCATCCTACTTGGGTTGAAATACCAAAACATGGCATT
GTTCCATGATTTGAGAACCagttcattggataaatacaaTGCAGAAATCC
TAAAGAtagtgaaaaattttaaacacgaTTTGGATTCTCTAAGTAATCAA
GCGACAGACAATGCGTTTGAAATCAAAGCTTTGAAGCTCAAAATCAAAAG
CTTGGAAGAGATGATCGACTCAATCAAAAGCATCACAGTTGAGGTTGCGC
AAAAACAACCATTCTACTGGGATTTAAGATTACCTGTTGCTAATTTCTTT
GGAAGAGAAAAAGTCATCAAAGACATTGAAGCTATATTTGACTCTTCGAA
TTGTGTTGCTATTTCAGCTTTGGGTGGGACAGGCAAAACACAGACAGCTG
CAAAATTCATTGATGTGAACAAACACGGTTACGATAAGATATTTTGGATA
AACGCAAAGTCTTTACATAAAACTGTATGTGAAATTCTTTATATGATTTC
AAAAGAGGTAGTACCTCTGAAAGAGTCTCTGGTTTTGGTTTGCCAACTTT
TAACAAAACATCTAGATGGTGAAAAAGTCTTGTTCGTGATTGATGATGTT
TTTGAAGAACATTTaaacgatttgaaaactttcctTGGTAATGTGTCCTC
ACAAAGAATCTCAATACTATTAACAACACAATTGAATGAATTTGATGATC
CCAAAATTGTTCTCTACAAACTGCAACTTTTTGAAAGTGAAGAAGGGAAA
CTATTTTTGAGAGATAATTTACCAAACGCCACTCGGGAAGAGATTGATTC
ATTGGCTGAAGAATTACAATCATTCCCTCTAGTTTTGCAACAGGCTGTGA
GTTACATAAAAAAACATGGAACAAAAATCTCCACTTACATCTCAAGTTTC
AAAGAATCAAACTCGTCATTGCTACATCCAAAGAAAAAGCTTTCAGATTA
TGATAAGACATTGTTGACCGTCTGGTCATTGGCTTTTGAACAATTGAAGT
CCTCTCCAAAAGCTTGGAATGTCTTGGCAATGATGGCTTTTATGGATAAT
AGTTGCATTAAAAAAGAgacttttctttatttcagGGAAGTCAGCGACGA
GATTGAGCTAAATGAAATTTTGGATGAGATCTGTTCTCTTTCGTTGGTCC
AACAATCTGAAAGCCATCTACATATTCATGCTCTTGTGCAAAAAGTTATT
TGCATCTCTTTGGAAACAGGAGTTTTTAAAACTTCGATTAATGAGATAGC
ACTGATGTTGAAAGAGCTCCTAAATAACATCGCTATGGCTTTTTCTAAAG
ATGAATTTCATACGGATGAAAAAGATCTTTGGTACATCCATACAAAAAAT
CTTTGGAATGTACTGAATGAGAAACATCTGCTTGGTAAAATAATCATTAA
CATTACTACTTTGTTTCGGACTGCAGATTCGAGATTTGACATTCCGTTTA
TGAAGAATTACTATATCAACAATGAAGAATGTCTAAAAGTGTATGGCATT
ACTTACGATTTCATCAGTGCGTTGGAGCTGAAAAATTTGAGACTGGAAAT
CATGTATAGTAATGATGAAAAGATTGAATTGGAGGATGTTCAAAAATTTG
AGAGGGAATTTGAAAATGAACTGGCCAAACATCACGAAGAAGTATTCTCA
TACAAAATCCGAATAGCCTTTGCATTTAATCACTTGAAAGGAAAAGAGTA
CAAATCTTTTTCGAACAGAATCAATGAAGTGTACGATTGTCTCATTTCTG
TGACTGGTATGAACAGCATTAAATTGAAGCTTGCCAATTATTTCGTGAAC
GATGGTGACAACAAAAAGGCTGAAACTATTCTTGGAAGTCTTTCGATTTC
TGACTTAACCGTTGATGATAAATACCTAATGCTCGATACTGAAATAAGGA
TATCGATTAAGAACATAAATTTCAAAAGAGTTGGTAAACTGATTGAagaa
tttgaacaatttttaatgAGTAATAACATTCCACTTAATCATGCTTACAG
ACAGAGGTTCAACCTCTTAAAAGCTAGGTTTTTACTTGTCCTAAAAAGAT
ATCAAGACGCGTTGAATATTATAGAAAAGAGTTCGCTGCCATACAAACAA
GGCGCTGACTTCAGAAACAGAAAAGCTTTAATTCTTATCAAGCTTCACAG
ACATCACGAAGCGAGGGCATTGTTACCGAATGATGAAGACTGTCTTCCGA
ACCGTCACATATCTTTCATACTATCCTACATAAAGTTTATGATGAACGAT
TTCGATATGATACCCATGCTTCATGCTAGCGAGGATGAAATTCTAACTGA
CTGGATTGAACTTTACGCCATTGCGCATAAACAATTTCAAACACTGAAAA
ACGATGGCAGTAGAGCACGGGACGAGATAATAACCATCCTTCGAAATATG
GTCTTGTTTAAGAAAGCTATCATTGATATATTTGATAGAAAACTTGTATA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024173XLOC_024173Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039922-proteinTCONS_00039922-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039922-exon-sc0002243-1491911889:12327..15859TCONS_00039922-exon-sc0002243-1491911889:12327..15859Clytia hemisphaericaexon
TCONS_00039922-exon-sc0002243-1510915933:12327..15859TCONS_00039922-exon-sc0002243-1510915933:12327..15859Clytia hemisphaericaexon
TCONS_00039922-exon-sc0002243-1575043694:12327..15859TCONS_00039922-exon-sc0002243-1575043694:12327..15859Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002243supercontigsc0002243:12327..15859 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.256157	0.200702	0.28809	0.189169	0.474983	0.170608	1.31732	1.22041	0.75785	0.490189	0.800191	0.326982	1.89152	1.79555	0.444104	0.628083	0.368567	0.457869	1.07786	1.70217	0.76364	0.528515	0.558104	0.578543	1.4495	2.5521	0.204891	0.109333	0.201389	0.168975
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002182NB-ARC
IPR011990TPR-like_helical_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0043531ADP binding
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0043531 ADP binding
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039922 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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