TCONS_00039919 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039919
Unique NameTCONS_00039919
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length169

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039919 ID=TCONS_00039919|Name=TCONS_00039919|organism=Clytia hemisphaerica|type=transcript|length=169bp
CTGAATGATTATTTATCATGATTTTACTCAATTTTAGCATATACATCAAG
GAGGTGGCCATTCGGTTCAGCAGGAGGATGCAGAGAAACTGATGTTACCA
AAGTCATCAATGTAAAGTGTAACACTGCACGAAAGCCACGTAAGTAGTTC
ATTGTAGATGATAAAAGAG
Run BLAST on NCBI

transcript from alignment at sc0002241:24072..24240

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039919 ID=TCONS_00039919|Name=TCONS_00039919|organism=Clytia hemisphaerica|type=transcript|length=169bp|location=Sequence derived from alignment at sc0002241:24072..24240 (Clytia hemisphaerica)
CTCTTTTATCATCTACAATGAACTACTTACGTGGCTTTCGTGCAGTGTTA
CACTTTACATTGATGACTTTGGTAACATCAGTTTCTCTGCATCCTCCTGC
TGAACCGAATGGCCACCTCCTTGATGTATATGCTAAAATTGAGTAAAATC
ATGATAAATAATCATTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024170XLOC_024170Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039919-exon-sc0002241-1491911889:24072..24240TCONS_00039919-exon-sc0002241-1491911889:24072..24240Clytia hemisphaericaexon
TCONS_00039919-exon-sc0002241-1510915933:24072..24240TCONS_00039919-exon-sc0002241-1510915933:24072..24240Clytia hemisphaericaexon
TCONS_00039919-exon-sc0002241-1575043694:24072..24240TCONS_00039919-exon-sc0002241-1575043694:24072..24240Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002241supercontigsc0002241:24072..24240 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039919 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top