TCONS_00039876 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039876
Unique NameTCONS_00039876
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length138

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039876 ID=TCONS_00039876|Name=TCONS_00039876|organism=Clytia hemisphaerica|type=transcript|length=138bp
tcAGATTTGGTGGTTTCTCTACAGAAGAAACAGATGACGGCTTATTAGCA
GTATTGAAAGAATGCAAAAATGTCAACCTGGCTGACCAGAATGGAATGTC
TGCTGCACATCACGCCTCGCTTAAGAAAAAGCCTTGTA
Run BLAST on NCBI

transcript from alignment at sc0002228:27556..27693

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039876 ID=TCONS_00039876|Name=TCONS_00039876|organism=Clytia hemisphaerica|type=transcript|length=138bp|location=Sequence derived from alignment at sc0002228:27556..27693 (Clytia hemisphaerica)
TACAAGGCTTTTTCTTAAGCGAGGCGTGATGTGCAGCAGACATTCCATTC
TGGTCAGCCAGGTTGACATTTTTGCATTCTTTCAATACTGCTAATAAGCC
GTCATCTGTTTCTTCTGTAGAGAAACCACCAAATCTga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024136XLOC_024136Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039876-exon-sc0002228-1491911889:27556..27693TCONS_00039876-exon-sc0002228-1491911889:27556..27693Clytia hemisphaericaexon
TCONS_00039876-exon-sc0002228-1510915933:27556..27693TCONS_00039876-exon-sc0002228-1510915933:27556..27693Clytia hemisphaericaexon
TCONS_00039876-exon-sc0002228-1575043694:27556..27693TCONS_00039876-exon-sc0002228-1575043694:27556..27693Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002228supercontigsc0002228:27556..27693 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039876 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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