TCONS_00039874 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039874
Unique NameTCONS_00039874
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1347

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039874 ID=TCONS_00039874|Name=TCONS_00039874|organism=Clytia hemisphaerica|type=transcript|length=1347bp
TAGTACGCCTCCCATGAAGATGTAGAGATGCTGAAAATTCTGGTCAAAGC
CGGTGCACCAATGAACTTAACCAACAACGAAGGTCAAACACCATTCGATA
TGGCAAAACAACAGCCGTCAGGTATCATGGCTAATAAACTGGCAAAGTAT
AAAGCAGTGTGTACACAAGACCTTATGGAAACAGACAAGAATTACGATCG
AGGTTTCAAATTCACCAAGGAAGATCCATTGAAGGATATGACCTTTGATT
ACAAAGCAGATCACAAAGCAGAAATTgaagacaaaattgaaaaaatcgtG
GAGGATTATCAAGAGTCGAGTGAAGTGGATCATGCAGCTAAAAGCAACAT
TGAAGGCACTGATATTGAAGTATACATCGACCCAGTCAACAACAAACCTT
ACGATACAACTTTGATCAAAACTTTGGTCAAAGTGAATATTCATGGTCAT
GGTCAATATGGAATCAATTCATTCTACAAAATGCAGGTCATTCATCACAA
AGCGAAAGGATTGTACATCTTATTCAACCGATGGGGGCGTGTGGGCTTAT
CTAATGGACAACACCAACAAACTCCCTTCGACACTGCCGAAGCAGTCACA
AGTgaattcaaaaagattttccgcTCTAAGACGGCTAACGAGTGGAGCAG
AACCGATACGTTCGAGAAGAAAGCTGGGAAATACAACTTGCTGGCCCGAG
AAAAGAATCCGGAACGAATGAAACGATTCCACAAGCAAGTCCTGAAACCT
TTCTTAGACAAATCGCATTTGAAACAACCGAATGTTGAAGATGGTCTTGT
GGAGAGTCGATTGGACGAGCATGTTTATCGCTTAATGAAGGACATTACAA
ATTACAGTGAATTAAAGGCCATTGAATCATTCTTCGATAAAGATCGAACA
CCATTTGGTTTGATTTCTACCGAATCCAtccaaaaaggaaaagaaatccT
CACAAAGATACGAGAAGAAAACGAaattcaaattaatatttttgaaaatc
aaaagaaacaagATAAGTACGAAAAGTTGACCAACTTAACGAACGAATTC
TATTCCATCATCCCATTTACCAATTTTGACATCGAAGACACTGGTATTAT
GAAATCACGCGAGCTCAATTCTTGGGAGGACCGTCTTAAGCAAATTTCAG
ACGTCAGTTTTGCTTTCTCCGTACTTTTAGCTGCTCAACACCGCATGCAA
GAGGTGAACCCCTACGATTACTGTTTGGGTTCACTGGATTGCCGTATCGA
ACATATGTCTGCTGAAAGCGATGAAGCTAAACTTATCTCAAAATACATAT
ACAGAGAAGGAAAAAGCTGTGACGCAAAagTGACCGGAATGTTCCGC
Run BLAST on NCBI

transcript from alignment at sc0002228:4075..17280-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039874 ID=TCONS_00039874|Name=TCONS_00039874|organism=Clytia hemisphaerica|type=transcript|length=13206bp|location=Sequence derived from alignment at sc0002228:4075..17280- (Clytia hemisphaerica)
TAGTACGCCTCCCATGAAGATGTAGAGATGCTGAAAATTCTGGTCAAAGC
CGGTGCACCAATGAACTTAACCAACAACGAAGGTCAAACACCATTCGATA
TGGCAAAACAACAGCCGTCAGGTATCATGGCTAATAAACTGGCAAAGTAT
AAAGCAGTGGTAAGTAATTTCTAGAATAAACAGTTAAAACTCGAAACAAA
TTCTCGAGAAACTCAAAAAATAAAGTTATCAAGAAGAATATTCAATATAT
CCTCCACCCCTCTCCCGATGTACCGCCCACCGCCCGTTTACAAAAATTTT
CTAGAAGAACCCAATAGTTATTACGATTTACTTTCTAAACCATCATCAAG
ACTCAGAGACATCATTATACACATTTTCGACCGTAGTCGCGCGGTCAGGC
GCATGCCACTTAATTATTTAATTATCCCCCTAAACTAGATCCAATCTTTT
TTTGACACATTTTTCTATTGTCTGTAAGTGCGAAAAAAGGACTGGGACGG
TTTTAGTGGGATAAAGCGGACAAAAAAATGCCCGTGCGGCAATTGGCGGC
TACGGTCGAAAAGGTGTATTGAGAGGTGAAAACTAACATTTAAATTACTT
TCTGGCGAGGATCTAAGATTTTTTTTCTCGTATTTTTAGGGGGGTTGTTA
GGACTAACTTTTTAAGCCCATTTGTCAAAAGTTGCCTTTGGATATAAAAA
GAAGAAAAATTCATGTAAAAACCCTGTGGCACTTTTTTCAAGGTTGCCAC
GGGTAGGGTGCCACCGTCGCTCCGCCAGCAAAATCGAAATTTCAAAAAAA
ATTTAAACATAGTGAAGTGACCCCTCATTTGAAAGGTATTTTCATGCTGA
TTAAGAAAATCAATATTGTAAGGGTGAAAAACACTCTAACAAGAAGTAAC
TTAAGAAAAACGATCAAAAAATTGCGTTTTTAGAAAAATCCTCAAAATTT
TGCCAACTGTCGGAAATTTCTTTTTGTGACAGTGTTTTTCACCCTTACAA
TCTTGATTTTCTTAATCAGCATGAAAATACCTTTCAAATGAGGGGTCACT
TCACTATGTTTAAATTTTTTTTGAAATTTCGATTTTGCTGGCGGAGCGAC
GGTGGCACCCTGCCCGTGGCAGCCTTGAAAAGGGTGCCACAGGGTTTTAA
CATGATTTTTTTTTCTTTTTATACCCAAAGGCAACTTTTGACAAATGGGC
TAAGAATTTATGCCGTTTTTGCAAAATAACATCCCCCCCCTTAGTATTTT
GATAAAGTCTTTTGAAACCAATCAGAAAGCTTTATTTATCATCCCCGTTT
CGGTTTCCACCTCTTAATAATGGTTTCAACTAACGAGGGCACGGTTTACG
TGAATACGTGCATGATTGGGTATTTTTTTTTGCATGAATGCGTAAAAATG
GAAACGAAAATTCGGTGAATATGTTAAGTGAAATAAATTGCGTGAATTTT
TGAATTTTGTGAAATTTTAGAACAATCCACGATTGGCACGAAAATTTCTC
TGACTTTGAATTTGAAAATCATTGTGTGAATAGTGTGAGTTTTTGGTCAC
ATGAAAAATTTTTTTGAAATCTTTGAACTACGAACTACGAACAAAATTCT
TAGCCCCTTCTGAGAATTCGAATTACATGGGTTTTAAAGAGACGTGAACA
ACGTGTCATTAAAGAGAACAATTACAATCGTGTGTCCAAAAGAAACTTTG
TAAAACAATAGAAACAATCAAAATCAGCCATATTTGTTTTTATTTTGACA
TGTGACATTTCGTTAGTACTTTTATGTCCCTTTAAACTGTATATGCATTT
ATTAATTTATTAAGTGAAGGAATTGTTTTTGAATCATAGTGTACACAAGA
CCTTATGGAAACAGACAAGAATTACGATCGAGGTTTCAAATTCACCAAGG
AAGATCCATTGAAGGATATGACCTTTGATTACAAAGCAGATCACAAAGCA
GAAATTGAAGACAAAATTGAAAAAATCGTGGAGGATTATCAAGAGTCGAG
TGAAGTGGATCATGCAGCTAAAAGCAACATTGAAGGCACTGATATGTAGG
ATTCTTTCAAATTTTTTTCATTTGGCACCTTGGGTGGATTAAATTTGAAC
TGGTGAATTATTCCATGCCAATTATTTTGAAATGAACAACTTTTATAAAA
CTGTGCCTTCTCGGTCGAAAGTAGGCTACGTCATATCTTCCTTCGTTTCG
AGCGTAAAACTCCCACTCTTCGGGCTATGAGCACTGCTCTTGTTTTGAAT
ATTGAAATTCTCCGGATAAATCGCATGCGCACTGAGGTTTTAATGAAACA
ATAGAAAGTGTCGAAACCTAAGCCAATCAGCTGTGTTTAAAAATTCTTTT
ATTTAAAATCTCTATTGATAAACATCTTTTGTGAATGTTGTCTATTATGT
TTAAACCTATTAATAAGCAATTCCCGGTGGGGCTCACTAGTGGCCGCCTA
TAGCAGTGCCTATAGACCAAGAGTAAGGCCTAAAAGCCTGGATCTGTCTA
TTGTGTAGACTAGGTCGAAAGTATTTGTGGAAAAAACTTCCAGTACTTGA
CAAAAAACTCCTCAACTTTTCTTCTATTGGCCAATTTCCTACTGATGAAT
TTAAATTTGGATAAGAATAAGAAAGTAAATTTTTTTTTTCTTTTCTTTCT
TTCATGCAGTGAAGTATACATCGACCCAGTCAACAACAAACCTTACGATA
CAACTTTGATCAAAACTTTGGTCAAAGTGAATATTCATGGTCATGGTCAA
TATGGAATCAATTCATTCTACAAAATGCAGGTACTTCCAAATTGAAAATA
TATCAAAGTATACTGAAGTATATGATNGTTGTACAGGACAAAATGCCTGA
ATATCAAGCGGGTGCAGGACAAAATGTCTGAATATCCAGGTTGTACAGGA
CAAAAAGCCTGGATATCCAGCAGGTGCAGGACAAAATGCTTAGGTTCTAC
AGGACAAAATGCCTGAATACCCAGGTTGTACAGCACAAAATGCCTGGATA
TCCAGCGGGTGCAGGACAAAATGTCTGAATATCCTCAATGCTTCTATCCA
CTTGGAGATCCAGGATATTAAGGGGGTTATTTTTAACCCAGACATCCAGG
GGGGCTATGGAACTCGAAAAATGGATATCCTCATCATGAAGGTATGGAAG
ATTTCTTGAAAATCCCGTTCTCTATTCAGTGATGACACCAGGGCCTGGTT
GTTCAAAAGTTGATCACTTTAAATCCCGGTCACCGCTAGTCGCTATTATA
TTTCGATAAGTTTATCTCGGCGATTAACTTCCGCTGTTCGAACGTCAAAT
TAGATTAGCGTGGATTTTTGCCTATGTTTTTACGAAGCTCAACATAGTCA
ACTGCTCTTGTTTATTCAGAAATGTGAAAGGTGTCTCTCTATCCTTGTAG
TATCCAAATTTGTTTGGTCTTTTCTTACAGGTCATTCATCACAAAGCGAA
AGGATTGTACATCTTATTCAACCGATGGGGGCGTGTGGGCTTATCTAATG
GACAACACCAACAAACTCCCTTCGACACTGCCGAAGCAGTCACAAGTGAA
TTCAAAAAGATTTTCCGCTCTAAGACGGCTAACGAGTGGAGCAGAACCGA
TACGTAAGTCAAATTTCTTTTTTCACAATGATATATCAATTTCAGAAAAG
TAGAGTCTAAATCAAATCTACTAATAGGGCTATTCCAGAAAAATATTTAC
GCTCATGTAGAGGAGGTCATTTTTGGAAGGCCAGACCCTTTGGATTTTTG
CCAAAATATTCATGTCCACCCTTTGATTTTTAAGCCAATTTTTGAGCTAC
CACCTTGGATTTTTGCTGAAAATTCAAATACCACCTGGATTTTTCACTCA
TTTTCATTGACCCCCACGGATTTTCTTTAATTTAAGGGGTACTCTCCTGG
AATTTCAAACTTCCAGACCCCCTGGACGTCACTCCTCCTCAATATAGGGG
GTACGGTTGTTTTCTGAAATAGCCCATTATAGGTGAAACCAATCTCGTAT
CCAGAGCATCAGTTTTTAATTTTAAATGATGGACGTACATTTTTTCGTGA
GAATCATCAAATCAAAAAGCGAGCTAAAGGATTGGATACAAGTTTGGGAT
GAAACGATAGGAACGGCTCTACTCTACTCTACTCAACTGTTATGACGCCC
CACTGAAAGGGTGGTGGTACACCTTTCACACCATTTTTTATTACCTCTCC
ACCCGGTTATTAATTTTTCAAAGATTTTCGGATCCGCCCTCCTCCCCCAT
TCTTATAAGGACCCCCGTCCCGTTTATTTATTTATTTATTTTTGGACCTA
CCCCGGTGGGGTGGAGGTCCTATAAATAAACTTCCGTTCGTCCGTCCGTT
CGTTACCAGCTTTTCTCGAGATTTTCAAAAAACAATTTTTTGGGGAAATT
TGGGCCAAAAAACGGCTAAAGAACGGGTTTTTTGGACTTTGTGAAAAATT
GAATCATTAACTTTTTCTGATTTTTTGCATGAAAGTAGGGTACCATCATA
GATAAAAGATGGCTCAAGTAGATTTTTTCAAAAAAAAAATTTTTGACTCA
GAAAACGTATGTTTATTTATAAGAATCACTATTGATAAGCATACATCAAT
GTTCTTATCCAATTTACTCAATTTTTTGATGAGATAGATGTTTTTTGCTC
ACAAAGTCTTGAATATGAAAGAATATTTCAAGAGCATGAAATTTTGGTTT
TTAAACGTTTTTTTTATAAGAATCAAACGACGAACTTTAATAGATCGTCA
CTATTTATGTTCTGAATGATTGTTTAACGGTCACGCTCACGTAGATATCA
ATTATATATGGGTTAATTGCATAACCAGGTAGGTCCATAAAAGTATCACT
TGTTATTTTATTTATTTCTTCTAAATACTTCGACCTGGGGGGGGGGTACA
TAGGCAAAAATGGGTGCTGGGTATGTGCGTGCCTTAAGGGTCGGTTTTTC
ACCTTTCAAAGTCTCTCTAAGGGTCGAAAAAAGCAGAAATTTTTAAATCA
GTCTCTCTAAAGTTCGGAAAAGTCATGATTTTTAGGAATTTTTTTTTATC
TTTGAGAGAAAAAAATCGTAACAAAGTCTCTCTAAGGGTAGGATTTTTTT
TTAAAGTGGAAAAATTTTTTTCAAAAAGTCTTTAAGTAAGAATCAGTCTC
TATAAGGGTTAAGGTTTGGTGGTCCAGCACGCACATACCCAGTATCCCTC
AACTCTAGTACCCCCACCCCGGGACTTCAACAATCACTCTCGTTCCTACT
GTTCATTAGTTGATAGCGTTCTTCAGTANTTTTTTTTTTTGTCGACTTTT
ACACTTCTTATACGCATTGAGTTTCATGTATGAAATAAAGGTCTGAACCA
AACGATTTGAATTAAGAATTTTCTTAAAAGTTTTTTTTTATCATCAACAG
GTTCGAGAAGAAAGCTGGGAAATACAACTTGCTGGCCCGAGAAAAGAATC
CGGAACGAATGAAACGATTCCACAAGCAAGTCCTGAAACCTTTCTTAGAC
AAATCGCATTTGAAACAACCGAATGTTGAAGATGGTCTTGTGGAGAGTCG
ATTGGACGAGCATGTTTATCGCTTAATGAAGGACATTGTAAGTTTTGATT
TGTTGCATAGAGTTTAGAAATTGGCAGAAGTGGCAGCTAAAAGTTATTAT
TTTTGCCTTTAAAATTTAGCGCGAAAATCTTACAGTAAGTAGGCCCATGA
ACATATAAATGACTAGACGTCCATTTTTTTGTAGAAAGCTATGGTAGCCT
CGTTGTTGCCACGTTAAATTCATAAAATTAAACAATGGATTTCGATCATA
TCTCCGGGGAAGACTTTACTAGCAGCGACAATACTTTNCAATGGATTTCG
ATCATATCTCCGGGGAAGACTTTACTAGGAGCGACAATACTTTCGATAAA
AACCTCAGTGACTTTTATTCTTGTGTTGGTGAGATGGAGCATGTTGCATT
ACACCAACGTGAAAAAAACTTCTCCTGTGCCCAAGCCTTTAGCTATTTTC
AACTATTTTATTTACATTTTGAGAAAAATAAGAGAGGCAAAATAATTTGT
CAGCTTTGTAGTAGCAGTAGAAGTAGTAAAGAAGCTGATTGTAAAAACGC
TGTAAGAATATCTCAGCCTAAATATTCAAACTTTTAACCAAAAATAAGCT
GGTTTCTGTAAAAAAGAATTTTCAAAACCTTCGTTCGTTCGTTCGTTCGT
TCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTC
GTTCGTTCGTTCGTTCGTTCGTTCNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTATTCCAATAAGGCTGAGAATATAGCCTGGAAG
CCACTTAACCCCTCCCAAATCGAAAAATCCAATGAAGCAAAGTGGAAATA
CTGAAACTGCAATTCTCGCCCGACCTTTAAATTCTGAAAAACGTTAAAAT
ACCCAAAATTGCCAATATATATCGGCGCTGATTGTAGTTCTATTTTTATC
TAACTCTCGTAATCAGATAGGTCCATTCAGCATGAGGCTTGTTTACGTTT
CAATCTTCTTCTTTTTTTATCTCTACAGACAAATTACAGTGAATTAAAGG
CCATTGAATCATTCTTCGATAAAGATCGAACACCATTTGGTTTGATTTCT
ACCGAATCCATCCAAAAAGGAAAAGAAATCCTCACAAAGATACGGTATGT
GTCCTTCATTTTAAAAAGGATAATCAGATGGTTTGAGATTTTTGGCTTGT
AAAATCCTTTCATGGTCCTAACTAAATCCTAAAGATCTCTTTTGGGCCAA
TTGATTTACAAAGTTGAGATATTAAAATATGAAATATAAAAAAAAATGGT
TGTTTTCTTGATAAAAGTCAAAAACTTGAACATATCGAATGTGAATATAT
TTGGAGGTTTTGCTTAGGACCCAGGGAGAGATAAACAGCCAATGTAATAA
TATGATAAANTGGAGGTTTTGCTTAGGACCCTGGGAGAGATAAACAGTCA
ATGTAATAATATGGTAATCCTTGTCAATACTATACTGGAATTTCTCTTCT
TTAATGTCAAAAATTTTCGCGTGTTTTAACAGACTGGAAGTAGTTAGTAA
AATCGTAACCAACTTCAAAAGGGTCTAGGGTGGTTCAAAAAAAAACTTTG
GACGTTTGTTTGTTTCTTGAGACTGTGTGAATTCTTAAACGACCTTGAAA
TACATTTATTAGATAGAAGAAGATCTAACTTAAGTCTAACTTGAACTTTG
AGGTATAATTTTTTAAATTTGGATGAGTGGTTTTGGAGTTATAACTTTTC
AAAGTCAAAATTCACTTTTTAAAATGTGCAAAAACACGTCAAAAAAGAGG
GATAAGATATCGTAAATCAATTGATAAAAGGCACACAATTTGACACATTT
AATGAGTTTTACTACCTTATTAACTATCTAAATACTTAAAAAATTAATAT
TTGCGCAAAACAGAATATTTTCTTGACAAATCTGGCAGTACTTAAATGAA
TTGCCTAAAATTCCAAAAGATTTCTAGATAAAAACGAAGAAAAAAGCCTA
ATTTGATCCCCTTTTTTGGCATATTTTTCTACTTTTGGAAAAGTGAATTT
TAACTTTGAAACTATTGACTTTGGGTATTGAATTGTATCATGAGCAGTAT
AGGTAGGGTTAAAAAATACCGGGTGTGTCAAAAAAAAACGGGCCTAAAAT
TGAAATTTTGACGTAGCTTTTTCTACTTATGCTAGGCTCATAAAATTTTT
ATAATAGGCTCAATGTCATATTTGCAAAATATTATGAGCCTAGCATAAGT
AGCATAAGTAGAAAAAGCTACGTCAAAATTTCAATCATAGGCCCGTTTTT
TTTGACACACCCGGTATGAATGACTTTCCAATTTGCGAAAAGTAAAATAT
TCAAGGAAGAAAACATAGGACGCAAATTTTGGTGTTTTCAGAGCCACTTT
CAATTAATTTTAGGTTGATTCGCGAAAGTTAATCCAAATTTGGCGAACTT
TTAGCTCGCTAAATAAAATCTCTCCAAATTTAAACTGGTTACATAAGGTA
GGGAATGAAATACAGCTCATCCTCATCTTCTTACTTCATGCTCATCTTAC
TTCATAGAGAAGAAAACGAAATTCAAATTAATATTTTTGAAAATCAAAAG
AAACAAGATAAGGTGAGAACTTAAAATCATCAATTTTAATTCATTCAGTA
TCCCAAAATGCACTGTAAGGGTGTGTTTCTGTGAGATTGTACTGCAAGGG
TCGATTTTAAAACAAATTCAAAATAATTGTTAAAAAGGTTTTTACTTCTC
GTTTGTTTGAAAAAGTTTCTATTGTCTGATAATTACAGCTGACAAGAATA
ATTTTCTCAGGTTTTTCCTTGAAACAGAAAATTTCCCAAGCTTCTTCTTT
CACGCAGATTTCCAGTTGAGAAATATAGTGCACTTTAAGGGTTGGGTAAA
TTAAGAGAAAATGGACTGAAAGGGTACCTTTTCAGCCATATTGAACTGCA
CTGTAAGGGTACGATTTTGAAAAGAGATTTTGCGCGGCACATATCGTCGT
TTCGAAATCGGGTACCCCCCTCCCCCCGGACTCGTCCCACAATGCATCGC
ATTTTTAGAAAAATCAAAAACTCCGATAAGATCTTTTCGTCCCTTTCAGT
ACGAAAAGTTGACCAACTTAACGAACGAATTCTATTCCATCATCCCATTT
ACCAATTTTGACATCGAAGACACTGGTATTATGAAATCACGCGAGCTCAA
TTCTTGGGAGGACCGTCTTAAGCAAATTTCAGACGTCAGTTTTGCTTTCT
CCGTACTTTTAGCTGCTCAACACCGCATGCAAGGTATTTACTAATTTCCT
TGGCTACCCACATCTTCAGTGATTCTCTCATACTAAGACCATATTTAGAC
GTTACGGTTCCGTTTCGCTCCGGTGTGATTTTCGTTACGGATCGAGAGTG
TTAATATTAGTTTCGGAACGTTTTGGAGCATGAAAATGGAGCAGTTCCGT
TTCGATGAAAATAGTGGAGCGAAATCGTTTCAATCTGTTTTGCTGTACAA
CGTCTTCTTTTTTGACGTTTCGAATTTTGACGTTCCGTAACGTCTGAACA
TTATGGTCTAATACCATGTTCAGACGTTACGGTTCCGTTCCGAAACGGTT
CCGAAACAACTGTGAACGTCAAAATTCGAAACGTCAAAAAAAGAAGACGT
TACGAAGCAAAACAAATCGCAACGGTTTCGCTCCACTTTTTTCATCGAAA
CGGAACTGCTCCGTTTTCTTTTGCTCCGAAACGTTCCGAAACCAATATAA
ACACACTCGATCCGTAACGAAAATGATACTGGAGCGAAATGGAACGGTAA
CGTCTGAACATGGTCTAAGAATAAAAAAAGACACGTGCTTAATTTTTTCT
GGAGTGTGTAAATTCGTGTTATACAGTGTTGCAACTTTACCGTTCATAGA
CGGAAACCAATCCAGTTAAGTTACAAAGGGTTGTTCCAGAAAAATATATT
TTTGGAAATTTACCCTCAAGCAGAGCAAAATTACCCCCCCCCCCGGACAA
GGCTAATTTTGAAGATTTCTTTCTACCCCCGGGCACTCTATCATCCGACC
CCATATACAAACATTTTTTGGAAGAGCCAGGAAGAGCCCAAATACATGAT
TTTTGTCTTCTCGTCATTAAGACGGATCTCAGCAATGTACAAATGATTTC
GGTCAACTAATACAGGAAACATTATGACCTGGCTGCCATACGTTCTAAAA
TATTTAACGTTATATTTCTGACTGAAGACTGCCTGAAACGGCACTGAAAC
TCCGAGTATCGGAAAATAAATTTGTCTCTATTCTTGACTGATAACGTTAT
ATTTTATATTTTCAAACTTTACAGAGGTGAACCCCTACGATTACTGTTTG
GGTTCACTGGATTGCCGTATCGAACATATGTCTGCTGAAAGCGATGAAGC
TAAACTTATCTCAAAATACATATACAGAGAAGGAAAAAGCTGTGACGCAA
AAGGTATTATTTTTTCAAAATTTTATTCATCAGTAATTTAATTACTCTGC
TCAATGGTCGCCTCAGCTAGTCTAGATTCATTTATATTTAAATTGACCCA
CCAACGATTTTGAGTTCTTCAAAATCTTCAGTTTCCAGCTCATAATCCTC
TGGCTGCTGGTTCTCTTTGTCCAATGTGCTATGAGCCATTGTTGAGTTGT
AGTTTATGTTGTTATAAAAATAACAGTACTGTAGTATATGTTGTTGTAAA
AATAACACTTGTGAGCAATGATTTGATGATAACAGTTTGAATTTCAGAGA
TACTTCGAGTCAGTCAGCTAGTTTTCCTTGTGTTTTTGTACTGAAACCGC
AATTTTTAAAAATCGGAACATTGCTAGCCTCGTTTTCAAGTATTACGCAA
TAATTTATGAAAAGCCGTATTATTCAGCTGACAAATGATGTCATTCAACT
CTCATGTGATCTTGAGGAAGACCCTGGATGTTAGACGTTAGGTAAACGAT
ATTTGATACTTGATGGAGCGGTAGAATGATTTTTAGCTTAATCTTGATTC
TGATGTAATGTTGTACTAACTGCTTTTTGTTTTCGTTTGTTTTAAATTGC
ATCTTGGAGAAAGTGAAGATGAGACTGAAGAGCAGGAAGATGTTTGAAAA
TAAGGAGAGTGATATATTTGACAATCAAGATGATGATTCCACAGATGTGG
AGAATTACGAAGGCATATTCTCATTTCCTTGTTATTGTTTTCACTGGTGC
AATTTACTAAATTTAGCGTTTCAGTCGTAAAATTGTAATATTAACTTATT
AGCAGTCTCATTAAATACACAATGGAGTATGAAAAACTATAGAATAACAC
GTTAGTCGTGAGAAAAGCCCCACATGTTTTCTTTTATAAGAACAAGCTAT
ATAAGAACAGAAGGCTTCGATGTCCAAAATGCTAAGAACAAGTTAAGAAC
ATTTTAAGGCTTTGCGGATTCGAAAATACCCGATTCTGAAAATGGGTCGA
AATGGCCACAAAATCAAGAAAGTAAGAAACATGTTAAAAACATTTTTAGG
CTTAAAATCCAAAAAGTTAAGAACGCTCTTAAAAGAAGAAAAACTGTCAT
TTTACCATTCTTGACACTGGATTAATTCATAACTCAAGAACGCTTGATAA
ATTTCAAGAAAACATCTTGGTTATCTTTTTCAGGTGAGGCACAAAATTTT
GAAATTACCTTAATGGAAGAAATTTTAGCGGAAAGAAAATTTGGCAGATT
TGGCGGATTTGGCCATAATCCACCAAATTAAGTTCCCGCCAAATTAAACT
TTTTGAAAATATGATCTCTTCTAAGGTGTTTTTGGATTTTTTTTGCTGTT
TTTACGCCATTTTAAGTATAAAATTTTCATCAAACGCCAAATTAAATTCC
CGCCAAATTTAGTTTTTTCGTCCATCCGCCAAATTAAATTCCATCTAAAA
AACTTTTTCGGCCATCCGCCAAATTAAATTCCCGCCAAATTTAGTTTTTT
CGTCCATCCGCCAAATTAAATTCCATCTAAAAAACTTTTTCGGCCATCCG
CCAAATTAAATTCCCGCCAAAATTTCTTCCTTTAAGGTAATATGGTTTTA
AACTTGCTGTCTCTTCACAAGGAAAATAAGCAAAAATTCCAATCTTGCGC
GCACGAAAATTTACCATCTGTTTCTCTCGTTTTTCTTAGTGACCGGAATG
TTCCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024134XLOC_024134Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039874-exon-sc0002228-1575043694:17122..17280TCONS_00039874-exon-sc0002228-1575043694:17122..17280Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1575043694:15236..15441TCONS_00039874-exon-sc0002228-1575043694:15236..15441Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1575043694:14501..14621TCONS_00039874-exon-sc0002228-1575043694:14501..14621Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1575043694:13678..13850TCONS_00039874-exon-sc0002228-1575043694:13678..13850Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1575043694:11694..11880TCONS_00039874-exon-sc0002228-1575043694:11694..11880Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1575043694:9087..9202TCONS_00039874-exon-sc0002228-1575043694:9087..9202Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1575043694:7619..7673TCONS_00039874-exon-sc0002228-1575043694:7619..7673Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1575043694:6948..7131TCONS_00039874-exon-sc0002228-1575043694:6948..7131Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1575043694:5778..5906TCONS_00039874-exon-sc0002228-1575043694:5778..5906Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1575043694:4075..4091TCONS_00039874-exon-sc0002228-1575043694:4075..4091Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1510915933:17122..17280TCONS_00039874-exon-sc0002228-1510915933:17122..17280Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1510915933:15236..15441TCONS_00039874-exon-sc0002228-1510915933:15236..15441Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1510915933:14501..14621TCONS_00039874-exon-sc0002228-1510915933:14501..14621Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1510915933:13678..13850TCONS_00039874-exon-sc0002228-1510915933:13678..13850Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1510915933:11694..11880TCONS_00039874-exon-sc0002228-1510915933:11694..11880Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1510915933:9087..9202TCONS_00039874-exon-sc0002228-1510915933:9087..9202Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1510915933:7619..7673TCONS_00039874-exon-sc0002228-1510915933:7619..7673Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1510915933:6948..7131TCONS_00039874-exon-sc0002228-1510915933:6948..7131Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1510915933:5778..5906TCONS_00039874-exon-sc0002228-1510915933:5778..5906Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1510915933:4075..4091TCONS_00039874-exon-sc0002228-1510915933:4075..4091Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1491911889:17122..17280TCONS_00039874-exon-sc0002228-1491911889:17122..17280Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1491911889:15236..15441TCONS_00039874-exon-sc0002228-1491911889:15236..15441Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1491911889:14501..14621TCONS_00039874-exon-sc0002228-1491911889:14501..14621Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1491911889:13678..13850TCONS_00039874-exon-sc0002228-1491911889:13678..13850Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1491911889:11694..11880TCONS_00039874-exon-sc0002228-1491911889:11694..11880Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1491911889:9087..9202TCONS_00039874-exon-sc0002228-1491911889:9087..9202Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1491911889:7619..7673TCONS_00039874-exon-sc0002228-1491911889:7619..7673Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1491911889:6948..7131TCONS_00039874-exon-sc0002228-1491911889:6948..7131Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1491911889:5778..5906TCONS_00039874-exon-sc0002228-1491911889:5778..5906Clytia hemisphaericaexon
TCONS_00039874-exon-sc0002228-1491911889:4075..4091TCONS_00039874-exon-sc0002228-1491911889:4075..4091Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002228supercontigsc0002228:4075..17280 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.022413	1.15681	0.452286	21.4404	20.7816	25.0899	33.5953	2.47956	0.000509569	2.8343	5.47467	0.556057	3.11769e-10	4.59065e-10	0	1.3855	3.15895	0.0225782	0	1.42594e-07	1.2459	3.05071	1.50414	13.2112	18.4586	1.20194	0.220256	1.19029	0.0104273
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039874 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top