TCONS_00039836 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039836
Unique NameTCONS_00039836
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1783

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039836 ID=TCONS_00039836|Name=TCONS_00039836|organism=Clytia hemisphaerica|type=transcript|length=1783bp
gtctGAAGCCGGTCACTGAATCTAAATTAGTCTGTATTGTTATGTTCTTT
TTCAGCTATGTGGAAACAGATCAAAGGCACTATCAACCCTATTCTCAATG
GTAACAGTAAACGTAAGAGAAGAGTAATGGAAATGTTGAAGAAAGAACAG
AAGGAGAAAATAGGATCAATGGTGGAAGaattaaaaagcattgatgaaat
tttcaaacaaattggAGAACAGTTATCTTCTCGTTTTGggGTAACCTTGA
ATCTCAAAATACCTGACCTACAAAATGATACACAAGAGCCTACATCTGAT
GTCGAAAGAAGTGAAAATGATATTTCTGACAAGGTAGAATATGACCAACA
ACAAGAGaatGAAAAACCTAGGAGTAAACGCTTCAAGTGGAACGTTGAAG
AAGTGCCAATAGAAGAGCAGCAGAAAAAGAAGATCGAAAGGCTGCAACAA
GTCAATAGAGAGCAAACACACACTATCAACGTTTTACGAGAGAAGAACGC
GTCACTTTGTCTAACAAGTGCGAGCTATACCCACCAAAAAATGGTTGATC
AACTTGGGCAAACTCGTTCGGCATCGTTAGTAGATGCATCtttattttct
aattctttCCATACTGGAGATTCCGTATTGCAGAAGCAAGAACCCGTATT
TCTCGgtgaaaatgaatttaaggGGTTAAGAACTACAAATTTGCCCTCCG
GATCTTTTTCTGACGTCAAACGATATTTCTTTTCTGGTGATGATGATGAG
ACGGTGGCTGTCAAATGCATGAGAACTGATATTTTTGGCTATCAAGTACT
CGCAGTTTTAAGCCATGAACACCGACTTTTGGCCTTTGCTGGTCGACATA
AAAACATTGTTCGCACAATGGGTTTGGTACGCATCGGGGGAGCTTTGTCT
CATGTTATGTACTATCAAGATGGGACAAGGCTTGATCTTATGATTCAAAA
GTCCACATTAAGaacgtttttcatttttaaagagTTGATCGAAGGAATTG
CTTGTGGACTCAACTTTCTTTTTTCGAAAGGAATTATACATAACAATTTA
GTTCcagaaaacattattttgaaaGATTGGGAGCCTGTTATTGTTGGATT
TTCATTTGCCTGCCGTTCGGAAAGTGTTAAACCGaaagtttctaaatttt
tgatgaGCAAATTCCCTGAGCAGAAACATTTTGCTCCTGAGATATTTACC
GGCTCGCCAGTCAGTTTTTCGACTGACGTATATGCATTTGGTGTTTTGGT
TGAAAGAATTCTGCGAGCCACGCGTGATTTCAAGTTGGATGACATACTCA
AATCAAGAATTGATTGTTTTGCTACTGCTGGTTGTCAGTCAATTTTTGAT
TATAGGGAACGAGCAGATACTCTCTTGGAAAGAGTCAGGGCTATGTTTGC
CTACTAGTTCCAGAACAAATAAACTGGATCCTaatattcctttttttatt
tcactctGATtttgtaccctgagtatcagaggccgagttttcaaagaaaa
tatcaacctctgacgacCAAGTGTAAAAATGTTattgcgcatgtgtcaat
ctagtCACTGTAAAAAGAATCAACGACGAAGAGCAAATATTGCCATGTTA
ATGtttagcagactgtatcagtatacaTGTTCACTAttgacgaattcccc
agaaacctccaagtgtaccaattgaaatgaatttctttcaaaagaaatct
tttacatgattcccaagtgtataacagtaattactaaactattaattatg
gtaatgtggaatcgaaataatagacatatCTTT
Run BLAST on NCBI

protein sequence of TCONS_00039836-protein

>TCONS_00039836-protein ID=TCONS_00039836-protein|Name=TCONS_00039836-protein|organism=Clytia hemisphaerica|type=polypeptide|length=449bp
MWKQIKGTINPILNGNSKRKRRVMEMLKKEQKEKIGSMVEELKSIDEIFK
QIGEQLSSRFGVTLNLKIPDLQNDTQEPTSDVERSENDISDKVEYDQQQE
NEKPRSKRFKWNVEEVPIEEQQKKKIERLQQVNREQTHTINVLREKNASL
CLTSASYTHQKMVDQLGQTRSASLVDASLFSNSFHTGDSVLQKQEPVFLG
ENEFKGLRTTNLPSGSFSDVKRYFFSGDDDETVAVKCMRTDIFGYQVLAV
LSHEHRLLAFAGRHKNIVRTMGLVRIGGALSHVMYYQDGTRLDLMIQKST
LRTFFIFKELIEGIACGLNFLFSKGIIHNNLVPENIILKDWEPVIVGFSF
ACRSESVKPKVSKFLMSKFPEQKHFAPEIFTGSPVSFSTDVYAFGVLVER
ILRATRDFKLDDILKSRIDCFATAGCQSIFDYRERADTLLERVRAMFAY
Run BLAST on NCBI

transcript from alignment at sc0002214:10348..13551-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039836 ID=TCONS_00039836|Name=TCONS_00039836|organism=Clytia hemisphaerica|type=transcript|length=3204bp|location=Sequence derived from alignment at sc0002214:10348..13551- (Clytia hemisphaerica)
GTCTGAAGCCGGTCACTGAATCTAAATTAGTCTGTATTGTTATGTTCTTT
TTCAGCTATGTGGAAACAGATCAAAGGCACTATCAACCCTATTCTCAATG
GTAACAGTAAACGTAAGAGAAGAGTAATGGAAATGTTGAAGAAAGAACAG
AAGGTATTTATTACAAATAGTGATTGTATTCCTTTATGATATCGTCTGTT
AGTAGTATACTTCGTAGTACAGACAGTTCGAGAATTAGACGGAAATTAAT
CATCTAATTTTTGGACCTACCGGGAGGTCCTTTAATTTGACCGTTGTCCG
TTCGTCTCTTACAAGCTTTTCTCGGGATTGGCTCATTAGTTTTTTGTTTT
TTTTTTCCTGATTTTTGGCAGAACGATAGAGTGCAAGGCACCCTAAAATG
TGGCTGAAGTAATTTTTCTCGGGAAATTTTTTTTCGTCGTAAAATACGGA
TTTTTGCAAGTTTGGGCCAAAAACTATCTAAAAATAAGTTTTTTTGGACT
TGGTGCAAAATTGCTTCATTAGTTTTTTCTGATTTTTTGGACAAAGATGA
AGGGCAAGGTTCTCTAAAACGTGACTGAAGTAGTTTTTTTACGGAAAATT
TATTTTGGCCGTAAAAATCGGATTTTCTTATTTGGGGAAATTCCCTTTTG
TCATATTTAGGGAAAATGAGCATTTCTCGAGATTGGCTTGGTATTTTAAT
CTTATTTTTTGTATAGTGGTAATTTGGGTAGAAAAGTGCCTAATGTTTGT
TTTTTTAGACTTTTTTGACTAATTTGAGCTCTGATACTCACGGTAATCTA
TTCAAGCTGCTCACTACACTTTCTTATTCCCTTGCTATTTGTCCTATTTT
TTCTGATTTGGATCGACAGGTAGGTCCATTCAGCATGTTGCTTGTTTTTG
TGGAAATTATACTGTTGCTAACACAATTGTTTGCTTAGGAAAACACTACA
GAAAGAGCTAAATGTAGTTTTGATTTTGAGATTTCTTTTCTTGCTTTTCC
AAATAATTCAGGAGAAAATAGGATCAATGGTGGAAGAATTAAAAAGCATT
GATGAAATTTTCAAACAAATTGGAGAACAGTTATCTTCTCGTTTTGGGGT
AAAAATTTATTTAAAAAAAGAGTTTATATCGTTTATTGGAAGGTCTGAGG
ATTCTTGAAAACTTTCAGAACATTGATATAGCAGTTTGAAATTTAATTAT
AAATTCATTACGATCCCCGTGTTTCATGGGTTACCTTTCTCACTTGTAAA
AACATTGTTCGTCAACAATTATTTAACTAAGTGCAAATATTAATATGCGG
AAATCTTTTTAGGTAACCTTGAATCTCAAAATACCTGACCTACAAAATGA
TACACAAGAGGTGATATTTTAATTTTAATTCTAAGTTTTACGCTTTATTA
GGGTTATCAATCATTCTGAACAAAGTTTTATGCCTTATTGGGGTTATCAA
TCATTTTGAATCATTGGGTTATAAATCCCAGTTTAAACGACTAAATAAAC
TTCATGAAATTATATATTTTTGATATTGAATGGAATTTTTTCAGCCTACA
TCTGATGTCGAAAGAAGTGAAAATGATATTTCTGACAAGGTAGAATATGA
CCAACAACAAGAGGTAATTATGACTCAATCTTATTCCAGTTAGTGTAAGC
GTCGTGTCAGAGCTTTGAAGTGCTATTTGATATTTAAAGAGAGAGATAGG
GTGTTGCTACAACTCACTAAAAGCTCAAAGTTTCTTAATTAACATAATCC
CTGACGAGTGTTCTGCTTTTTATTTTAGAATGAAAAACCTAGGAGTAAAC
GCTTCAAGTGGAACGTTGAAGAAGTGCCAATAGAAGAGCAGCAGAAAAAG
AAGATCGAAAGGCTGCAACAAGTCAATAGAGAGCAAACACACACTATCAA
CGTTTTACGAGAGAAGAACGCGTCACTTTGTCTAACAAGTGCGAGCTATA
CCCACCAAAAAATGGTTGATCAACTTGGGCAAACTCGTTCGGCATCGTTA
GTAGATGCATCTTTATTTTCTAATTCTTTCCATACTGGAGATTCCGTATT
GCAGAAGCAAGAACCCGTATTTCTCGGTGAAAATGAATTTAAGGGGTTAA
GAACTACAAATTTGCCCTCCGGATCTTTTTCTGACGTCAAACGATATTTC
TTTTCTGGTGATGATGATGAGACGGTGGCTGTCAAATGCATGAGAACTGA
TATTTTTGGCTATCAAGTACTCGCAGTTTTAAGCCATGAACACCGACTTT
TGGCCTTTGCTGGTCGACATAAAAACATTGTTCGCACAATGGGTTTGGTA
CGCATCGGGGGAGCTTTGTCTCATGTTATGTACTATCAAGATGGGACAAG
GCTTGATCTTATGATTCAAAAGTCCACATTAAGAACGTTTTTCATTTTTA
AAGAGTTGATCGAAGGAATTGCTTGTGGACTCAACTTTCTTTTTTCGAAA
GGAATTATACATAACAATTTAGTTCCAGAAAACATTATTTTGAAAGATTG
GGAGCCTGTTATTGTTGGATTTTCATTTGCCTGCCGTTCGGAAAGTGTTA
AACCGAAAGTTTCTAAATTTTTGATGAGCAAATTCCCTGAGCAGAAACAT
TTTGCTCCTGAGATATTTACCGGCTCGCCAGTCAGTTTTTCGACTGACGT
ATATGCATTTGGTGTTTTGGTTGAAAGAATTCTGCGAGCCACGCGTGATT
TCAAGTTGGATGACATACTCAAATCAAGAATTGATTGTTTTGCTACTGCT
GGTTGTCAGTCAATTTTTGATTATAGGGAACGAGCAGATACTCTCTTGGA
AAGAGTCAGGGCTATGTTTGCCTACTAGTTCCAGAACAAATAAACTGGAT
CCTAATATTCCTTTTTTTATTTCACTCTGATTTTGTACCCTGAGTATCAG
AGGCCGAGTTTTCAAAGAAAATATCAACCTCTGACGACCAAGTGTAAAAA
TGTTATTGCGCATGTGTCAATCTAGTCACTGTAAAAAGAATCAACGACGA
AGAGCAAATATTGCCATGTTAATGTTTAGCAGACTGTATCAGTATACATG
TTCACTATTGACGAATTCCCCAGAAACCTCCAAGTGTACCAATTGAAATG
AATTTCTTTCAAAAGAAATCTTTTACATGATTCCCAAGTGTATAACAGTA
ATTACTAAACTATTAATTATGGTAATGTGGAATCGAAATAATAGACATAT
CTTT

Coding sequence (CDS) from alignment at sc0002214:10348..13551-

>TCONS_00039836 ID=TCONS_00039836|Name=TCONS_00039836|organism=Clytia hemisphaerica|type=CDS|length=6750bp|location=Sequence derived from alignment at sc0002214:10348..13551- (Clytia hemisphaerica)
AATGAAAAACCTAGGAGTAAACGCTTCAAGTGGAACGTTGAAGAAGTGCC
AATAGAAGAGCAGCAGAAAAAGAAGATCGAAAGGCTGCAACAAGTCAATA
GAGAGCAAACACACACTATCAACGTTTTACGAGAGAAGAACGCGTCACTT
TGTCTAACAAGTGCGAGCTATACCCACCAAAAAATGGTTGATCAACTTGG
GCAAACTCGTTCGGCATCGTTAGTAGATGCATCTTTATTTTCTAATTCTT
TCCATACTGGAGATTCCGTATTGCAGAAGCAAGAACCCGTATTTCTCGGT
GAAAATGAATTTAAGGGGTTAAGAACTACAAATTTGCCCTCCGGATCTTT
TTCTGACGTCAAACGATATTTCTTTTCTGGTGATGATGATGAGACGGTGG
CTGTCAAATGCATGAGAACTGATATTTTTGGCTATCAAGTACTCGCAGTT
TTAAGCCATGAACACCGACTTTTGGCCTTTGCTGGTCGACATAAAAACAT
TGTTCGCACAATGGGTTTGGTACGCATCGGGGGAGCTTTGTCTCATGTTA
TGTACTATCAAGATGGGACAAGGCTTGATCTTATGATTCAAAAGTCCACA
TTAAGAACGTTTTTCATTTTTAAAGAGTTGATCGAAGGAATTGCTTGTGG
ACTCAACTTTCTTTTTTCGAAAGGAATTATACATAACAATTTAGTTCCAG
AAAACATTATTTTGAAAGATTGGGAGCCTGTTATTGTTGGATTTTCATTT
GCCTGCCGTTCGGAAAGTGTTAAACCGAAAGTTTCTAAATTTTTGATGAG
CAAATTCCCTGAGCAGAAACATTTTGCTCCTGAGATATTTACCGGCTCGC
CAGTCAGTTTTTCGACTGACGTATATGCATTTGGTGTTTTGGTTGAAAGA
ATTCTGCGAGCCACGCGTGATTTCAAGTTGGATGACATACTCAAATCAAG
AATTGATTGTTTTGCTACTGCTGGTTGTCAGTCAATTTTTGATTATAGGG
AACGAGCAGATACTCTCTTGGAAAGAGTCAGGGCTATGTTTGCCTACTAG
CCTACATCTGATGTCGAAAGAAGTGAAAATGATATTTCTGACAAGGTAGA
ATATGACCAACAACAAGAGGTAACCTTGAATCTCAAAATACCTGACCTAC
AAAATGATACACAAGAGGAGAAAATAGGATCAATGGTGGAAGAATTAAAA
AGCATTGATGAAATTTTCAAACAAATTGGAGAACAGTTATCTTCTCGTTT
TGGGATGTGGAAACAGATCAAAGGCACTATCAACCCTATTCTCAATGGTA
ACAGTAAACGTAAGAGAAGAGTAATGGAAATGTTGAAGAAAGAACAGAAG
AATGAAAAACCTAGGAGTAAACGCTTCAAGTGGAACGTTGAAGAAGTGCC
AATAGAAGAGCAGCAGAAAAAGAAGATCGAAAGGCTGCAACAAGTCAATA
GAGAGCAAACACACACTATCAACGTTTTACGAGAGAAGAACGCGTCACTT
TGTCTAACAAGTGCGAGCTATACCCACCAAAAAATGGTTGATCAACTTGG
GCAAACTCGTTCGGCATCGTTAGTAGATGCATCTTTATTTTCTAATTCTT
TCCATACTGGAGATTCCGTATTGCAGAAGCAAGAACCCGTATTTCTCGGT
GAAAATGAATTTAAGGGGTTAAGAACTACAAATTTGCCCTCCGGATCTTT
TTCTGACGTCAAACGATATTTCTTTTCTGGTGATGATGATGAGACGGTGG
CTGTCAAATGCATGAGAACTGATATTTTTGGCTATCAAGTACTCGCAGTT
TTAAGCCATGAACACCGACTTTTGGCCTTTGCTGGTCGACATAAAAACAT
TGTTCGCACAATGGGTTTGGTACGCATCGGGGGAGCTTTGTCTCATGTTA
TGTACTATCAAGATGGGACAAGGCTTGATCTTATGATTCAAAAGTCCACA
TTAAGAACGTTTTTCATTTTTAAAGAGTTGATCGAAGGAATTGCTTGTGG
ACTCAACTTTCTTTTTTCGAAAGGAATTATACATAACAATTTAGTTCCAG
AAAACATTATTTTGAAAGATTGGGAGCCTGTTATTGTTGGATTTTCATTT
GCCTGCCGTTCGGAAAGTGTTAAACCGAAAGTTTCTAAATTTTTGATGAG
CAAATTCCCTGAGCAGAAACATTTTGCTCCTGAGATATTTACCGGCTCGC
CAGTCAGTTTTTCGACTGACGTATATGCATTTGGTGTTTTGGTTGAAAGA
ATTCTGCGAGCCACGCGTGATTTCAAGTTGGATGACATACTCAAATCAAG
AATTGATTGTTTTGCTACTGCTGGTTGTCAGTCAATTTTTGATTATAGGG
AACGAGCAGATACTCTCTTGGAAAGAGTCAGGGCTATGTTTGCCTACTAG
CCTACATCTGATGTCGAAAGAAGTGAAAATGATATTTCTGACAAGGTAGA
ATATGACCAACAACAAGAGGTAACCTTGAATCTCAAAATACCTGACCTAC
AAAATGATACACAAGAGGAGAAAATAGGATCAATGGTGGAAGAATTAAAA
AGCATTGATGAAATTTTCAAACAAATTGGAGAACAGTTATCTTCTCGTTT
TGGGATGTGGAAACAGATCAAAGGCACTATCAACCCTATTCTCAATGGTA
ACAGTAAACGTAAGAGAAGAGTAATGGAAATGTTGAAGAAAGAACAGAAG
AATGAAAAACCTAGGAGTAAACGCTTCAAGTGGAACGTTGAAGAAGTGCC
AATAGAAGAGCAGCAGAAAAAGAAGATCGAAAGGCTGCAACAAGTCAATA
GAGAGCAAACACACACTATCAACGTTTTACGAGAGAAGAACGCGTCACTT
TGTCTAACAAGTGCGAGCTATACCCACCAAAAAATGGTTGATCAACTTGG
GCAAACTCGTTCGGCATCGTTAGTAGATGCATCTTTATTTTCTAATTCTT
TCCATACTGGAGATTCCGTATTGCAGAAGCAAGAACCCGTATTTCTCGGT
GAAAATGAATTTAAGGGGTTAAGAACTACAAATTTGCCCTCCGGATCTTT
TTCTGACGTCAAACGATATTTCTTTTCTGGTGATGATGATGAGACGGTGG
CTGTCAAATGCATGAGAACTGATATTTTTGGCTATCAAGTACTCGCAGTT
TTAAGCCATGAACACCGACTTTTGGCCTTTGCTGGTCGACATAAAAACAT
TGTTCGCACAATGGGTTTGGTACGCATCGGGGGAGCTTTGTCTCATGTTA
TGTACTATCAAGATGGGACAAGGCTTGATCTTATGATTCAAAAGTCCACA
TTAAGAACGTTTTTCATTTTTAAAGAGTTGATCGAAGGAATTGCTTGTGG
ACTCAACTTTCTTTTTTCGAAAGGAATTATACATAACAATTTAGTTCCAG
AAAACATTATTTTGAAAGATTGGGAGCCTGTTATTGTTGGATTTTCATTT
GCCTGCCGTTCGGAAAGTGTTAAACCGAAAGTTTCTAAATTTTTGATGAG
CAAATTCCCTGAGCAGAAACATTTTGCTCCTGAGATATTTACCGGCTCGC
CAGTCAGTTTTTCGACTGACGTATATGCATTTGGTGTTTTGGTTGAAAGA
ATTCTGCGAGCCACGCGTGATTTCAAGTTGGATGACATACTCAAATCAAG
AATTGATTGTTTTGCTACTGCTGGTTGTCAGTCAATTTTTGATTATAGGG
AACGAGCAGATACTCTCTTGGAAAGAGTCAGGGCTATGTTTGCCTACTAG
CCTACATCTGATGTCGAAAGAAGTGAAAATGATATTTCTGACAAGGTAGA
ATATGACCAACAACAAGAGGTAACCTTGAATCTCAAAATACCTGACCTAC
AAAATGATACACAAGAGGAGAAAATAGGATCAATGGTGGAAGAATTAAAA
AGCATTGATGAAATTTTCAAACAAATTGGAGAACAGTTATCTTCTCGTTT
TGGGATGTGGAAACAGATCAAAGGCACTATCAACCCTATTCTCAATGGTA
ACAGTAAACGTAAGAGAAGAGTAATGGAAATGTTGAAGAAAGAACAGAAG
AATGAAAAACCTAGGAGTAAACGCTTCAAGTGGAACGTTGAAGAAGTGCC
AATAGAAGAGCAGCAGAAAAAGAAGATCGAAAGGCTGCAACAAGTCAATA
GAGAGCAAACACACACTATCAACGTTTTACGAGAGAAGAACGCGTCACTT
TGTCTAACAAGTGCGAGCTATACCCACCAAAAAATGGTTGATCAACTTGG
GCAAACTCGTTCGGCATCGTTAGTAGATGCATCTTTATTTTCTAATTCTT
TCCATACTGGAGATTCCGTATTGCAGAAGCAAGAACCCGTATTTCTCGGT
GAAAATGAATTTAAGGGGTTAAGAACTACAAATTTGCCCTCCGGATCTTT
TTCTGACGTCAAACGATATTTCTTTTCTGGTGATGATGATGAGACGGTGG
CTGTCAAATGCATGAGAACTGATATTTTTGGCTATCAAGTACTCGCAGTT
TTAAGCCATGAACACCGACTTTTGGCCTTTGCTGGTCGACATAAAAACAT
TGTTCGCACAATGGGTTTGGTACGCATCGGGGGAGCTTTGTCTCATGTTA
TGTACTATCAAGATGGGACAAGGCTTGATCTTATGATTCAAAAGTCCACA
TTAAGAACGTTTTTCATTTTTAAAGAGTTGATCGAAGGAATTGCTTGTGG
ACTCAACTTTCTTTTTTCGAAAGGAATTATACATAACAATTTAGTTCCAG
AAAACATTATTTTGAAAGATTGGGAGCCTGTTATTGTTGGATTTTCATTT
GCCTGCCGTTCGGAAAGTGTTAAACCGAAAGTTTCTAAATTTTTGATGAG
CAAATTCCCTGAGCAGAAACATTTTGCTCCTGAGATATTTACCGGCTCGC
CAGTCAGTTTTTCGACTGACGTATATGCATTTGGTGTTTTGGTTGAAAGA
ATTCTGCGAGCCACGCGTGATTTCAAGTTGGATGACATACTCAAATCAAG
AATTGATTGTTTTGCTACTGCTGGTTGTCAGTCAATTTTTGATTATAGGG
AACGAGCAGATACTCTCTTGGAAAGAGTCAGGGCTATGTTTGCCTACTAG
CCTACATCTGATGTCGAAAGAAGTGAAAATGATATTTCTGACAAGGTAGA
ATATGACCAACAACAAGAGGTAACCTTGAATCTCAAAATACCTGACCTAC
AAAATGATACACAAGAGGAGAAAATAGGATCAATGGTGGAAGAATTAAAA
AGCATTGATGAAATTTTCAAACAAATTGGAGAACAGTTATCTTCTCGTTT
TGGGATGTGGAAACAGATCAAAGGCACTATCAACCCTATTCTCAATGGTA
ACAGTAAACGTAAGAGAAGAGTAATGGAAATGTTGAAGAAAGAACAGAAG
AATGAAAAACCTAGGAGTAAACGCTTCAAGTGGAACGTTGAAGAAGTGCC
AATAGAAGAGCAGCAGAAAAAGAAGATCGAAAGGCTGCAACAAGTCAATA
GAGAGCAAACACACACTATCAACGTTTTACGAGAGAAGAACGCGTCACTT
TGTCTAACAAGTGCGAGCTATACCCACCAAAAAATGGTTGATCAACTTGG
GCAAACTCGTTCGGCATCGTTAGTAGATGCATCTTTATTTTCTAATTCTT
TCCATACTGGAGATTCCGTATTGCAGAAGCAAGAACCCGTATTTCTCGGT
GAAAATGAATTTAAGGGGTTAAGAACTACAAATTTGCCCTCCGGATCTTT
TTCTGACGTCAAACGATATTTCTTTTCTGGTGATGATGATGAGACGGTGG
CTGTCAAATGCATGAGAACTGATATTTTTGGCTATCAAGTACTCGCAGTT
TTAAGCCATGAACACCGACTTTTGGCCTTTGCTGGTCGACATAAAAACAT
TGTTCGCACAATGGGTTTGGTACGCATCGGGGGAGCTTTGTCTCATGTTA
TGTACTATCAAGATGGGACAAGGCTTGATCTTATGATTCAAAAGTCCACA
TTAAGAACGTTTTTCATTTTTAAAGAGTTGATCGAAGGAATTGCTTGTGG
ACTCAACTTTCTTTTTTCGAAAGGAATTATACATAACAATTTAGTTCCAG
AAAACATTATTTTGAAAGATTGGGAGCCTGTTATTGTTGGATTTTCATTT
GCCTGCCGTTCGGAAAGTGTTAAACCGAAAGTTTCTAAATTTTTGATGAG
CAAATTCCCTGAGCAGAAACATTTTGCTCCTGAGATATTTACCGGCTCGC
CAGTCAGTTTTTCGACTGACGTATATGCATTTGGTGTTTTGGTTGAAAGA
ATTCTGCGAGCCACGCGTGATTTCAAGTTGGATGACATACTCAAATCAAG
AATTGATTGTTTTGCTACTGCTGGTTGTCAGTCAATTTTTGATTATAGGG
AACGAGCAGATACTCTCTTGGAAAGAGTCAGGGCTATGTTTGCCTACTAG
CCTACATCTGATGTCGAAAGAAGTGAAAATGATATTTCTGACAAGGTAGA
ATATGACCAACAACAAGAGGTAACCTTGAATCTCAAAATACCTGACCTAC
AAAATGATACACAAGAGGAGAAAATAGGATCAATGGTGGAAGAATTAAAA
AGCATTGATGAAATTTTCAAACAAATTGGAGAACAGTTATCTTCTCGTTT
TGGGATGTGGAAACAGATCAAAGGCACTATCAACCCTATTCTCAATGGTA
ACAGTAAACGTAAGAGAAGAGTAATGGAAATGTTGAAGAAAGAACAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024110XLOC_024110Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039836-exon-sc0002214-1575043694:13399..13551TCONS_00039836-exon-sc0002214-1575043694:13399..13551Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1575043694:12454..12540TCONS_00039836-exon-sc0002214-1575043694:12454..12540Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1575043694:12192..12239TCONS_00039836-exon-sc0002214-1575043694:12192..12239Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1575043694:11939..12007TCONS_00039836-exon-sc0002214-1575043694:11939..12007Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1575043694:10348..11773TCONS_00039836-exon-sc0002214-1575043694:10348..11773Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1510915933:13399..13551TCONS_00039836-exon-sc0002214-1510915933:13399..13551Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1510915933:12454..12540TCONS_00039836-exon-sc0002214-1510915933:12454..12540Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1510915933:12192..12239TCONS_00039836-exon-sc0002214-1510915933:12192..12239Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1510915933:11939..12007TCONS_00039836-exon-sc0002214-1510915933:11939..12007Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1510915933:10348..11773TCONS_00039836-exon-sc0002214-1510915933:10348..11773Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1491911889:13399..13551TCONS_00039836-exon-sc0002214-1491911889:13399..13551Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1491911889:12454..12540TCONS_00039836-exon-sc0002214-1491911889:12454..12540Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1491911889:12192..12239TCONS_00039836-exon-sc0002214-1491911889:12192..12239Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1491911889:11939..12007TCONS_00039836-exon-sc0002214-1491911889:11939..12007Clytia hemisphaericaexon
TCONS_00039836-exon-sc0002214-1491911889:10348..11773TCONS_00039836-exon-sc0002214-1491911889:10348..11773Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039836-proteinTCONS_00039836-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002214supercontigsc0002214:10348..13551 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	6.45654	5.85445	4.68194	4.48849	3.12642	2.71311	0.469852	1.43756	1.38795	0.320311	0.78115	0.619326	0.348144	0.20801	0	0.702038	0.896782	0	0.26587	0.241714	2.85375	3.57082	0.317954	0	0	0.356844
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039836 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top