TCONS_00039827 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00039827
Unique Name	TCONS_00039827
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1198

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0002212:13870..20586-
coding sequence from alignment at sc0002212:13870..20586-

transcript sequence

>TCONS_00039827 ID=TCONS_00039827|Name=TCONS_00039827|organism=Clytia hemisphaerica|type=transcript|length=1198bp
NCTTTTAGCATTATCATCCGGCTACACTGTTTTGCAGATTAAGGAGGAGG
CAAAAACATCGCTTGTCTATGTAATTCCATTGAATTCTGATCTTGACAAA
ACCCCACTAGAtgtcaataattttcaaaaccatGATGTGCAATTAGTCAA
ATGCCACACCTGTCAAAAAGAAGTTCCacttatttcttttcaaaaccacA
AAAGCAACTGCAAAACAACTGaatttgaagaaaacaaagaagaatCCGTT
GCTGACACAAtccaaaaattacaaattttattCCCCCAACATGATAAGGA
ATATTTAAACACAGTATTTTCTGGGTCCATACATATCAATGAAGCTGTTG
AGAAAATATTAAAGGAAATGAACAATTTGGAACACGGTAACAAAAACCTT
CTCGAGGAAACAGATATTCCTGGAGGTTCTGGTAATAATGATCTCGTTGA
AAGTGATAGCAGCAACAGTGACCATGACAGCCTACCAGATAGTGGTGTTG
GTAAGAAAATAAAAGACCAAAAGTTGAAGTGGGAATCATTCAAAAGGAGG
AACTTGAAAAAAGGGCATGTTCTCGTTAAAATAAACCGTGATACAATTCT
TTTATCGACAATGACTTTGTTCAAGCGTGGAGATATCAAAAACATTTCTA
TTCCACCAGAagttaaatttcaaaatgaagatGGCATCGACGCTACCGGC
CCGAGAAAGGAGTACTTTTTTCATACGATTAAATCTTTTCTCAGCGGAGA
AAAAAACATTGTGTTGTTTGAAGGCCGTGAAGACCGTAAAGTTCCAGTAC
ATGACACTGATCTGTTGGCTTCAGATTTCTTTTATTATGCTGGGAAATTT
GTGGCAATGGCTTTCTTCCATGGGGAAATTGGAATATGGAGTATTTCGCC
TTGCATTCAAGAATACATCTTGTCTGGATCCAAAACAGCAGCAATTGCAC
TTGTAGAAGCGAAAGATGTGGCTGACTTGGAAACCCAATCTATTTTGGAA
AGTataaaGAAAGCTTGCACGGAAGAAGACTTTGCTGATCTTAATGGGGA
AGATGGTATTTTATCACTGCTAAATGCTGCTggttttgtcaataaaatgt
tGGGTATAAAAACCAAGGATCAAGCGTACCAGGAAATTTTGTTCTATGAG
GTGATAACCAAAAGACGCGAAGAACTAGACGATTTCAGGAGAGGAATG

Run BLAST on NCBI

protein sequence of TCONS_00039827-protein

>TCONS_00039827-protein ID=TCONS_00039827-protein|Name=TCONS_00039827-protein|organism=Clytia hemisphaerica|type=polypeptide|length=399bp
LLALSSGYTVLQIKEEAKTSLVYVIPLNSDLDKTPLDVNNFQNHDVQLVK
CHTCQKEVPLISFQNHKSNCKTTEFEENKEESVADTIQKLQILFPQHDKE
YLNTVFSGSIHINEAVEKILKEMNNLEHGNKNLLEETDIPGGSGNNDLVE
SDSSNSDHDSLPDSGVGKKIKDQKLKWESFKRRNLKKGHVLVKINRDTIL
LSTMTLFKRGDIKNISIPPEVKFQNEDGIDATGPRKEYFFHTIKSFLSGE
KNIVLFEGREDRKVPVHDTDLLASDFFYYAGKFVAMAFFHGEIGIWSISP
CIQEYILSGSKTAAIALVEAKDVADLETQSILESIKKACTEEDFADLNGE
DGILSLLNAAGFVNKMLGIKTKDQAYQEILFYEVITKRREELDDFRRGM

Run BLAST on NCBI

transcript from alignment at sc0002212:13870..20586-

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00039827 ID=TCONS_00039827|Name=TCONS_00039827|organism=Clytia hemisphaerica|type=transcript|length=6717bp|location=Sequence derived from alignment at sc0002212:13870..20586- (Clytia hemisphaerica)
NCTTTTAGCATTATCATCCGGCTACACTGTTTTGCAGATTAAGGAGGAGG
CAAAAACATCGCTTGTCTATGTAATTCCATTGAATTCTGATCTTGACAAA
ACCCCACTAGATGTCAATAATTTTCAAAACCATGATGTGCAATTAGTCAA
ATGCCACACCTGTCAAAAAGAAGTTCCACTTATTTCTTTTCAAAACCACA
AAAGCAACTGCAAAACAACTGGTACAATTTTATTCTATATATTATTTACC
AACTAAAAGTATTATTTTCTTTCACTTGCCTTCTATATCTGTTGCTCTTG
CCTTAATTCTTTTTATGGTAGAGTTTAAAAACATGGGTAATAGGTCCTAA
TTCTCACAAGACCAGACTTACTACAGTATAGTAGTGAAACAAAAAGATCT
CTTTACCAACACTATAAATAGATGGGTTTTACAGGGAACATGTTAGCAGA
ACTTTTTGTATTTGTTGTCTAGATAAATCATTCTCTCAAAAAAGGCTGTG
ATGTGATATACTTTTTGACCTTGGTTTTAGAATTTGAAGAAAACAAAGAA
GAATCCGTTGCTGACACAATCCAAAAATTACAAATTTTATTCCCCCAACA
TGATAAGGAATATTTAAACACAGTATTTTCTGGGTCCATACATATCAATG
AAGCTGTTGAGAAAATATTAAAGGAAATGAACAATTTGGTGAGTTATTTT
TTAAAAGGGTTGTAATGTAATCATTAAATCGATTTGATTGGGCCCCATAG
TGTCCTCCTGGGTCAGCTCCCCCCAGGAAATGTGAAACGTTCGCTATTTA
AGCAGGGGAGGGGTCTGCGTCCATACTCTCAGTTCTTTAATAGACGGATG
TAATTTGAGTATTGATATCAGATATGGGACTGACCAGGGTTACAAATTAG
TGGGCAAAAAATTTCAGATTTTGAGAACATCATCAGAATATTTTGAGCCA
GAAAATTTTGAAAAATCAAGCACAATTGAGCTTAAGCCAAAATAAACTGG
TTCCTATTTTAAAAAGTGTGTATATTTGAAAAAGCTAATCAAGATTAAGA
ATTTTACAAAAGTTACGGCCAAGGGCAGAATAGGCCGGAAATTTTCTTCG
TTTGATATATAACAGTCGATAGTGCGTGACGCGCTGGTCTCAACTTCAAT
ATATTATCTACCGGGTGACCCACGAAAAAAAAAAACCAGGGTTTCAGTGA
AAAGTACCCTTGATATGATATTAATATTATCAAAAATTACTTTTTCATCG
TAAATAGATACATTAACTTAAATTTTGAGCTGTCAATTTTTTCTGACAAG
TAGTTCTCCAGATATAGAGGTTTGAAAGTCACTTAAAAAATTATCAAAAA
ACGTAATAAAAACAGGGCTTCAAATTTGACCATTTTTAACAAAGAAAATA
AACATTTTATGACAATGACTTTTGTTGCCGAATTAGTAATTTTATTGGTT
CTTTTTTATAAACAATTTTCAAAAAAGGTTTATAGGGTGAAAAACCAAAG
AACAATTTTAGAAAAAAATTCAGCAATTTTAGAAAAAAAAATTACAAAGA
AAGAGTTACAAAATGCTTAATTAGATACCCAGTTTTTGACGTTTTTTGAT
GATTTTTTAAAGTGATTTTTAACTTCAAACCTCCATATCTCGAAAACTCC
TTGTCAAAAGTAAAGAGGTGGTGGCTCAAAATATAAGTTTGAGTATCCTC
TTTGGGATGAAAAATTTTTCAACAAAATAATATCATATCGAGCGTACTTT
GCACCGAAACCCTGGTACTTTTTCGTGGATCACCCGGTAGATAATTTGTA
GACCCAATTGTAAAATTTATAAGCTAATCTTAATGAAATTTTCAGCCAAA
TCAGACCATTTTTATGTCTCCAGGCTGACCCCAAAGTTTTTTGCAACACT
TTGGTGAAAGCTCGTCCTCAGGCCCAAAAATCAAATGTTTAGAAATAAAA
TGAAGAAATTACCACCAAGTATTCACCCAAGGAATAAGTGTGCCAAATTT
CAGCCAAATCTGACCATTTTTAAAGTCTCCACACGAAAGTTAAAATTTGG
CTTTATTATTTATTATGATCAATGTAATCTTGAATGAATTTCTGATCAGA
TGCCAAATTTTCAGGTCTCTATCTGATCTGGAAGTCAAGTTATGGGGCTC
CAAAGTTGATTGAAAACCAGATTTTGATGAAAAATCAAAATAAGTTAAAA
ATTACTCTAGGGGCTGAGTTAGGTCCCGTATGCGCATCGGCGTATAGTCA
TTTTTTCTTTTGATCATANTCCTTGAAGAGTCAGAAAACGTGTGTGGCGT
TATTTGGATCAGGCACAAATTTCCATAATGGCGGATTTTAGATTTTCAAC
CCTTTTTAGCCGTCTTGCTTGAAAAAAATATTTTTTTGACTTTAAACATA
GACATATTATATACCAATCGATCACAAATTTTATGCTGATTAAGAAAAAG
ATCAGAATCATGGTCTGAAAATTTCGTTATCTGGAAATATGAAGCACTTT
CGATTTCGATTTTTTGAACTGACTACTTTTGGTTCCAGATTTGCGTGGCT
GTAACATTTGATTGGCTTATTTAATTTACTTGAAATTTTCGGAGGGTCTT
GCCTATCGTTCAAATAATAAAATTCAGGAAAAATTTTTTTTCTACATGAA
TTTCGAAATCCATAATGGCGGATTCAAAATTTCATGCTGAAAATTTCGTT
ATCAAGAGATAGGAAGTACTTACGTTTTCTAAGTTTTGAAAACGAAAGTA
CTTCATAGCTCGAGATAGCAAAATTTCAGACCACGGTTCTGACCTTTTTC
TTAATCAGCATAAAATTTCTGATCGATTGGTATATAATATGTAGGGTTTT
AAGCTCAAAAAATATTTTTCTTAGTCTAGCAGAGCCTAAGAGCCCATGTG
ACGCTGTTTTGATCTGTTGGTTCAACTTTTGTCCTTGTTGCGTTAAGTTG
GTGAAAATGATTTCTCGCTCTGTTTGAATGTTTTTGATTTTTAGTTTGAC
ACGCGTTTTCTGAATTTTAATTAGCTTTTTCAGATAAAAAGGGTTGAAAA
TCTAAAATCCGCCATTATGGAAATTTGTGCCTGGTCCAAATAACGCCACA
CACGTTTTCTGACTCTTCAAGGACTATACTTTCATGATCAAAAGAAAAAA
TGACTATACGCCGATGTGCATACGAGACCTAACTCAGCCCCTAGAGTAAA
TGGATATTTTTGAACATTCTGATCTAAATTCAGGGTTAAAACCAGTTTTT
TTGTGTGTTAACCTTAGAGACATTATATTCTTAAGAGAAATTACTCAAAA
GTATGTATAAATGTTTAAAAACAAGAAAAAACTCAAATTTTCCATCAAAA
TTCTCATCACGAATTTGTTTAAATTAGCCACAAATGTCAAAATATCTCAA
AAACTGCTAATTGTCACATATCAAACCATATGAAAACTACAGACACTAAC
CATTCTAGAAATGCTGGAATTTTGGTGTGACGCTTAGCGGTTTAGAAGTT
CAAATTTTAAAAATTGAAGTCTACAATATGTCTAACTCATGTAATGTGAC
CCTACAGCTTTTTGAAAGCCTTTACAATACAAAAAGTGTAAGAAGTGTCT
TGTTCCTCTCCTTCTCCTTTTTCCAAAGTTTTTCCATTTGGGCCCAGTGT
GCACCAGGCTCTCCTAAAGTATTTGGGACAAATACAGACAGACATACAGA
CATTTCCAGATTCCTAGCTCAACTTCTGTACATTTCGGATTTTAAGAAAA
TCCCTCATGGTGTTCTAGTTGAGATTTTGGTACTGACTCTGGAAGTCAGT
TTATAATTTTGTGTTTTTCTTCTCTACAGGAACACGGTAACAAAAACCTT
CTCGAGGAAACAGATATTCCTGGAGGTAATAATATATTTTTTATATTTCA
GATGGGCCCAAAATAACAAAACTTAAAATTTTATATGTGGTCAAGAAAAC
CTAAAATAATGATATTCCCAAAATTTTCATCTCAGAATAATGAAAGTCTT
GTAATTAATTAAAATTTTTGTTCCTATCAATTTAAGTAAAAAACTCTCTG
CCCTCTAAAAGAGGTCAACTCTTCTAGGTGGGTTCCAATCTCAGGAATCT
ATTATATAACTAAATTACATCAAGTAAGATCGTTTAAAATTTAAAATGGT
TTTTAAAGTGCGCAAATTCAAATAAAAAAGATGCAATTCTTTAACCCTAT
TAGCCCCAAGCTTTTTTTGCTTCTGTAGCTCCAAGGGGAGGGTAGAATCT
ACCACGCTCAATATTTTTTGATTCAGAAGTGCTATGATCATAAAAATTGG
TACAGATTTTCTCTATCATGAATGGAAATTCATAGAAGAAAAAAATTAAT
TACATCATCCAAAGTATGATGACGTCATCACAAAATTTCCACCTGTCGCA
AAATAGGGTAAAAAGTATGGTTTACAAAAAACAACCTCACGGTCGAACGG
AAAAAGATATTTAGGATCTGTTTTCAGATTCTGAAAGGTAAAAGATTGCT
TTTTAACACAATTGCCGGTTTTTATTTCTGAGTAAGATTTACTGTTAAAT
AAAAATCTATGCTGAAAATGAGTAAAATTTCCGAAAACTAATGACATCAT
CATTTATAAATTTTTTTTCTAAAATTTCTAGAATTAAATTGTCAATATCT
ATCATCTCTGAACATTTGAATTTGATTGGATGGATAGATTCTACCCTCTC
CTGTTGGGCAAATAGAGTTAAAGACCGTGTTGTTATAGTACGTTCACTCT
AACTTGGATAATCGTTAACAACTTCTAAGTACAAACCTTTTCTTTTCATC
ATAAAAACAACGAAAATAAAGTGTTTTGTAAAAAAGACATCCAAGTGAAC
GCACTATAAGGACTGGCTGAAACCGTTTTATATTCAATGTTGCTGACAAT
AAAAAATAAGCAGTGGCACGAAGGTTTTAACTTGTTGTTCTAACATCTTA
ACTTTTTACACGTTTAGGTTCTGGTAATAATGATCTCGTTGAAAGTGATA
GCAGCAACAGTGACCATGACAGCCTACCAGATAGTGGTGTTGGTAAGAAA
ATAAAAGACCAAAAGTTGAAGTGGGAATCATTCAAAAGGAGGAACTTGAA
AAAAGGGCATGTTCTCGTTAAAATAAACCGTGATACAATTCTTTTATCGA
CAATGACTTTGTTCAAGCGTGGAGATATCAAAAACATTTCTATTCCACCA
GAAGTTAAATTTCAAAATGAAGATGGCATCGACGCTACCGGCCCGAGAAA
GGAGTACTTTTTTCATACGATTAAATCTTTTCTCAGCGGAGAAAAAAACA
TTGTGTTGTTTGAAGGCCGTGAAGACCGTAAAGTTCCAGTACATGACACT
GATCTGTTGGCTTCAGATTTCTTTTATTATGCTGGGAAATTTGTGGCAAT
GGCTTTCTTCCATGGGGAAATTGGAATATGGAGTATTTCGCCTTGCATTC
AAGAATACATCTTGTCTGGATCCAAAACAGCAGCAATTGCACTTGTAGAA
GCGAAAGATGTGGCTGACTTGGAAACCCAATCTATTTTGGAAAGTGTAAG
TTCCAGTGATAGTTTTCCTTTTTTTATTTTTGGGTTCTCCTTGGACTGTA
CAATTCAATATTACTTTTTTAATACATAGCTGCATCCCCTAGCTTTTAAG
GGTTCGGGATTTCTAAATTTTGGAACTAAGAGGCCGTTTATATGGATCGA
TCTCGGAGCGGTTAGACTAGAGTCTTCTTTTGGCTGAACTTTGCTTTTTG
ATGATTTTGATGACGCTGAGTTCAGTAATGTAGACTAGGAGCAATTGGCA
TTTCTAACGCAAAGAAAATTTAAAGTGCACCGCTATCGATTCCAATTTCC
ATACCAAGCGATTTTCTCAATTGCGGTGCAGGAACTTCAAGATTTTATTT
TTTCCTGTGAAAGGCCTGGATCGATTGATGGATTTTGCCAACAAGCCGAA
CAAGCTAGAGCAAAAAGCTGTCAATATACACTGGGCCAATTAATCGCGTC
ATCCAGTCTATCAAAAAGCCTTAAGTGACCTACGGGCTACGGAGCCGTTT
GAGTTTGGCTTTTCGGAATCCAATCTCGGTTCGGTGCAAATGACCGTGAT
CAGTACAGCCTCAGAGGGAAACCCAAAACGCAGTTCCGCGTATGAGATTG
CAAAAATGAACTCAGTACGCTCCCGAACCGAGATGCATGTAAACAGGCTC
AGAAAAGATTTATCGAGATGAGCATTTAGAGGCTATAGACATTAAGAGTT
TTTTATTTGATAGGGAGGTTACTGATTTATTTTTGTGCATTTGTTTTCGA
AATTAGTATGTCCTATCAATACACGAGTTTCGTCCAAGCATTGCAACTGT
CATGGCGGTGCGAAGACCTCTTATTTTGAAGAATAATCATTATTGGTATC
TCTTAATTTTGATGCTTTTAACTCAAAACTTTAGGATCCTTAAGTTGAAA
TCCTGAATCCTAAAGTTCAGTCTTACCAATAATGTAGCAAGAATTTAATT
TAATCACTTCAATTTTTTTCAGATAAAGAAAGCTTGCACGGAAGAAGACT
TTGCTGATCTTAATGGGGAAGATGGTATTTTATCACTGCTAAATGCTGCT
GGTTTTGTCAATAAAATGTTGGGTATAAAAACCAAGGATCAAGCGTACCA
GGAAATTTTGTTCTATGAGGTGATAACCAAAAGACGCGAAGAACTAGACG
ATTTCAGGAGAGGAATG

Coding sequence (CDS) from alignment at sc0002212:13870..20586-

>TCONS_00039827 ID=TCONS_00039827|Name=TCONS_00039827|organism=Clytia hemisphaerica|type=CDS|length=5985bp|location=Sequence derived from alignment at sc0002212:13870..20586- (Clytia hemisphaerica)
ATAAAGAAAGCTTGCACGGAAGAAGACTTTGCTGATCTTAATGGGGAAGA
TGGTATTTTATCACTGCTAAATGCTGCTGGTTTTGTCAATAAAATGTTGG
GTATAAAAACCAAGGATCAAGCGTACCAGGAAATTTTGTTCTATGAGGTG
ATAACCAAAAGACGCGAAGAACTAGACGATTTCAGGAGAGGAATGGTTCT
GGTAATAATGATCTCGTTGAAAGTGATAGCAGCAACAGTGACCATGACAG
CCTACCAGATAGTGGTGTTGGTAAGAAAATAAAAGACCAAAAGTTGAAGT
GGGAATCATTCAAAAGGAGGAACTTGAAAAAAGGGCATGTTCTCGTTAAA
ATAAACCGTGATACAATTCTTTTATCGACAATGACTTTGTTCAAGCGTGG
AGATATCAAAAACATTTCTATTCCACCAGAAGTTAAATTTCAAAATGAAG
ATGGCATCGACGCTACCGGCCCGAGAAAGGAGTACTTTTTTCATACGATT
AAATCTTTTCTCAGCGGAGAAAAAAACATTGTGTTGTTTGAAGGCCGTGA
AGACCGTAAAGTTCCAGTACATGACACTGATCTGTTGGCTTCAGATTTCT
TTTATTATGCTGGGAAATTTGTGGCAATGGCTTTCTTCCATGGGGAAATT
GGAATATGGAGTATTTCGCCTTGCATTCAAGAATACATCTTGTCTGGATC
CAAAACAGCAGCAATTGCACTTGTAGAAGCGAAAGATGTGGCTGACTTGG
AAACCCAATCTATTTTGGAAAGTGAACACGGTAACAAAAACCTTCTCGAG
GAAACAGATATTCCTGGAGAATTTGAAGAAAACAAAGAAGAATCCGTTGC
TGACACAATCCAAAAATTACAAATTTTATTCCCCCAACATGATAAGGAAT
ATTTAAACACAGTATTTTCTGGGTCCATACATATCAATGAAGCTGTTGAG
AAAATATTAAAGGAAATGAACAATTTGCTTTTAGCATTATCATCCGGCTA
CACTGTTTTGCAGATTAAGGAGGAGGCAAAAACATCGCTTGTCTATGTAA
TTCCATTGAATTCTGATCTTGACAAAACCCCACTAGATGTCAATAATTTT
CAAAACCATGATGTGCAATTAGTCAAATGCCACACCTGTCAAAAAGAAGT
TCCACTTATTTCTTTTCAAAACCACAAAAGCAACTGCAAAACAACTGATA
AAGAAAGCTTGCACGGAAGAAGACTTTGCTGATCTTAATGGGGAAGATGG
TATTTTATCACTGCTAAATGCTGCTGGTTTTGTCAATAAAATGTTGGGTA
TAAAAACCAAGGATCAAGCGTACCAGGAAATTTTGTTCTATGAGGTGATA
ACCAAAAGACGCGAAGAACTAGACGATTTCAGGAGAGGAATGGTTCTGGT
AATAATGATCTCGTTGAAAGTGATAGCAGCAACAGTGACCATGACAGCCT
ACCAGATAGTGGTGTTGGTAAGAAAATAAAAGACCAAAAGTTGAAGTGGG
AATCATTCAAAAGGAGGAACTTGAAAAAAGGGCATGTTCTCGTTAAAATA
AACCGTGATACAATTCTTTTATCGACAATGACTTTGTTCAAGCGTGGAGA
TATCAAAAACATTTCTATTCCACCAGAAGTTAAATTTCAAAATGAAGATG
GCATCGACGCTACCGGCCCGAGAAAGGAGTACTTTTTTCATACGATTAAA
TCTTTTCTCAGCGGAGAAAAAAACATTGTGTTGTTTGAAGGCCGTGAAGA
CCGTAAAGTTCCAGTACATGACACTGATCTGTTGGCTTCAGATTTCTTTT
ATTATGCTGGGAAATTTGTGGCAATGGCTTTCTTCCATGGGGAAATTGGA
ATATGGAGTATTTCGCCTTGCATTCAAGAATACATCTTGTCTGGATCCAA
AACAGCAGCAATTGCACTTGTAGAAGCGAAAGATGTGGCTGACTTGGAAA
CCCAATCTATTTTGGAAAGTGAACACGGTAACAAAAACCTTCTCGAGGAA
ACAGATATTCCTGGAGAATTTGAAGAAAACAAAGAAGAATCCGTTGCTGA
CACAATCCAAAAATTACAAATTTTATTCCCCCAACATGATAAGGAATATT
TAAACACAGTATTTTCTGGGTCCATACATATCAATGAAGCTGTTGAGAAA
ATATTAAAGGAAATGAACAATTTGCTTTTAGCATTATCATCCGGCTACAC
TGTTTTGCAGATTAAGGAGGAGGCAAAAACATCGCTTGTCTATGTAATTC
CATTGAATTCTGATCTTGACAAAACCCCACTAGATGTCAATAATTTTCAA
AACCATGATGTGCAATTAGTCAAATGCCACACCTGTCAAAAAGAAGTTCC
ACTTATTTCTTTTCAAAACCACAAAAGCAACTGCAAAACAACTGATAAAG
AAAGCTTGCACGGAAGAAGACTTTGCTGATCTTAATGGGGAAGATGGTAT
TTTATCACTGCTAAATGCTGCTGGTTTTGTCAATAAAATGTTGGGTATAA
AAACCAAGGATCAAGCGTACCAGGAAATTTTGTTCTATGAGGTGATAACC
AAAAGACGCGAAGAACTAGACGATTTCAGGAGAGGAATGGTTCTGGTAAT
AATGATCTCGTTGAAAGTGATAGCAGCAACAGTGACCATGACAGCCTACC
AGATAGTGGTGTTGGTAAGAAAATAAAAGACCAAAAGTTGAAGTGGGAAT
CATTCAAAAGGAGGAACTTGAAAAAAGGGCATGTTCTCGTTAAAATAAAC
CGTGATACAATTCTTTTATCGACAATGACTTTGTTCAAGCGTGGAGATAT
CAAAAACATTTCTATTCCACCAGAAGTTAAATTTCAAAATGAAGATGGCA
TCGACGCTACCGGCCCGAGAAAGGAGTACTTTTTTCATACGATTAAATCT
TTTCTCAGCGGAGAAAAAAACATTGTGTTGTTTGAAGGCCGTGAAGACCG
TAAAGTTCCAGTACATGACACTGATCTGTTGGCTTCAGATTTCTTTTATT
ATGCTGGGAAATTTGTGGCAATGGCTTTCTTCCATGGGGAAATTGGAATA
TGGAGTATTTCGCCTTGCATTCAAGAATACATCTTGTCTGGATCCAAAAC
AGCAGCAATTGCACTTGTAGAAGCGAAAGATGTGGCTGACTTGGAAACCC
AATCTATTTTGGAAAGTGAACACGGTAACAAAAACCTTCTCGAGGAAACA
GATATTCCTGGAGAATTTGAAGAAAACAAAGAAGAATCCGTTGCTGACAC
AATCCAAAAATTACAAATTTTATTCCCCCAACATGATAAGGAATATTTAA
ACACAGTATTTTCTGGGTCCATACATATCAATGAAGCTGTTGAGAAAATA
TTAAAGGAAATGAACAATTTGCTTTTAGCATTATCATCCGGCTACACTGT
TTTGCAGATTAAGGAGGAGGCAAAAACATCGCTTGTCTATGTAATTCCAT
TGAATTCTGATCTTGACAAAACCCCACTAGATGTCAATAATTTTCAAAAC
CATGATGTGCAATTAGTCAAATGCCACACCTGTCAAAAAGAAGTTCCACT
TATTTCTTTTCAAAACCACAAAAGCAACTGCAAAACAACTGATAAAGAAA
GCTTGCACGGAAGAAGACTTTGCTGATCTTAATGGGGAAGATGGTATTTT
ATCACTGCTAAATGCTGCTGGTTTTGTCAATAAAATGTTGGGTATAAAAA
CCAAGGATCAAGCGTACCAGGAAATTTTGTTCTATGAGGTGATAACCAAA
AGACGCGAAGAACTAGACGATTTCAGGAGAGGAATGGTTCTGGTAATAAT
GATCTCGTTGAAAGTGATAGCAGCAACAGTGACCATGACAGCCTACCAGA
TAGTGGTGTTGGTAAGAAAATAAAAGACCAAAAGTTGAAGTGGGAATCAT
TCAAAAGGAGGAACTTGAAAAAAGGGCATGTTCTCGTTAAAATAAACCGT
GATACAATTCTTTTATCGACAATGACTTTGTTCAAGCGTGGAGATATCAA
AAACATTTCTATTCCACCAGAAGTTAAATTTCAAAATGAAGATGGCATCG
ACGCTACCGGCCCGAGAAAGGAGTACTTTTTTCATACGATTAAATCTTTT
CTCAGCGGAGAAAAAAACATTGTGTTGTTTGAAGGCCGTGAAGACCGTAA
AGTTCCAGTACATGACACTGATCTGTTGGCTTCAGATTTCTTTTATTATG
CTGGGAAATTTGTGGCAATGGCTTTCTTCCATGGGGAAATTGGAATATGG
AGTATTTCGCCTTGCATTCAAGAATACATCTTGTCTGGATCCAAAACAGC
AGCAATTGCACTTGTAGAAGCGAAAGATGTGGCTGACTTGGAAACCCAAT
CTATTTTGGAAAGTGAACACGGTAACAAAAACCTTCTCGAGGAAACAGAT
ATTCCTGGAGAATTTGAAGAAAACAAAGAAGAATCCGTTGCTGACACAAT
CCAAAAATTACAAATTTTATTCCCCCAACATGATAAGGAATATTTAAACA
CAGTATTTTCTGGGTCCATACATATCAATGAAGCTGTTGAGAAAATATTA
AAGGAAATGAACAATTTGCTTTTAGCATTATCATCCGGCTACACTGTTTT
GCAGATTAAGGAGGAGGCAAAAACATCGCTTGTCTATGTAATTCCATTGA
ATTCTGATCTTGACAAAACCCCACTAGATGTCAATAATTTTCAAAACCAT
GATGTGCAATTAGTCAAATGCCACACCTGTCAAAAAGAAGTTCCACTTAT
TTCTTTTCAAAACCACAAAAGCAACTGCAAAACAACTGATAAAGAAAGCT
TGCACGGAAGAAGACTTTGCTGATCTTAATGGGGAAGATGGTATTTTATC
ACTGCTAAATGCTGCTGGTTTTGTCAATAAAATGTTGGGTATAAAAACCA
AGGATCAAGCGTACCAGGAAATTTTGTTCTATGAGGTGATAACCAAAAGA
CGCGAAGAACTAGACGATTTCAGGAGAGGAATGGTTCTGGTAATAATGAT
CTCGTTGAAAGTGATAGCAGCAACAGTGACCATGACAGCCTACCAGATAG
TGGTGTTGGTAAGAAAATAAAAGACCAAAAGTTGAAGTGGGAATCATTCA
AAAGGAGGAACTTGAAAAAAGGGCATGTTCTCGTTAAAATAAACCGTGAT
ACAATTCTTTTATCGACAATGACTTTGTTCAAGCGTGGAGATATCAAAAA
CATTTCTATTCCACCAGAAGTTAAATTTCAAAATGAAGATGGCATCGACG
CTACCGGCCCGAGAAAGGAGTACTTTTTTCATACGATTAAATCTTTTCTC
AGCGGAGAAAAAAACATTGTGTTGTTTGAAGGCCGTGAAGACCGTAAAGT
TCCAGTACATGACACTGATCTGTTGGCTTCAGATTTCTTTTATTATGCTG
GGAAATTTGTGGCAATGGCTTTCTTCCATGGGGAAATTGGAATATGGAGT
ATTTCGCCTTGCATTCAAGAATACATCTTGTCTGGATCCAAAACAGCAGC
AATTGCACTTGTAGAAGCGAAAGATGTGGCTGACTTGGAAACCCAATCTA
TTTTGGAAAGTGAACACGGTAACAAAAACCTTCTCGAGGAAACAGATATT
CCTGGAGAATTTGAAGAAAACAAAGAAGAATCCGTTGCTGACACAATCCA
AAAATTACAAATTTTATTCCCCCAACATGATAAGGAATATTTAAACACAG
TATTTTCTGGGTCCATACATATCAATGAAGCTGTTGAGAAAATATTAAAG
GAAATGAACAATTTGCTTTTAGCATTATCATCCGGCTACACTGTTTTGCA
GATTAAGGAGGAGGCAAAAACATCGCTTGTCTATGTAATTCCATTGAATT
CTGATCTTGACAAAACCCCACTAGATGTCAATAATTTTCAAAACCATGAT
GTGCAATTAGTCAAATGCCACACCTGTCAAAAAGAAGTTCCACTTATTTC
TTTTCAAAACCACAAAAGCAACTGCAAAACAACTG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_024105	XLOC_024105	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00039827-protein	TCONS_00039827-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0002212	supercontig	sc0002212:13870..20586 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.12032	0	0	7.233	6.34274	5.61412	2.97013	2.19856	5.37772	7.77597	5.06851	1.97171	0.65292	3.2456	2.62548	1.73206	2.22534	2.35758	3.47514	2.60657	1.3161	1.55632	1.85807	0	0.404727	10.1754	8.0061	4.96513	2.46793

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000569	HECT_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004842	ubiquitin-protein transferase activity

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004842	ubiquitin-protein transferase activity

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00039827 vs. Swiss-Prot (Human)

BLAST of TCONS_00039827 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00039827 (transcript) - C. hemisphaerica