TCONS_00039822 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039822
Unique NameTCONS_00039822
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length140

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039822 ID=TCONS_00039822|Name=TCONS_00039822|organism=Clytia hemisphaerica|type=transcript|length=140bp
TTTCCAACGCCCCCCCCCTTGCCCCGCCGGGAATTGCCTCTGACGGGTAT
TCTAAGCTAGCAAAGTCAGCGATAATTTGATTCCATCATGATCGGATAAG
TTCACACATTTACGAATAACTTCAATACCATACTCGTGNN
Run BLAST on NCBI

transcript from alignment at sc0002206:37442..37581

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039822 ID=TCONS_00039822|Name=TCONS_00039822|organism=Clytia hemisphaerica|type=transcript|length=140bp|location=Sequence derived from alignment at sc0002206:37442..37581 (Clytia hemisphaerica)
NNCACGAGTATGGTATTGAAGTTATTCGTAAATGTGTGAACTTATCCGAT
CATGATGGAATCAAATTATCGCTGACTTTGCTAGCTTAGAATACCCGTCA
GAGGCAATTCCCGGCGGGGCAAGGGGGGGGGCGTTGGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024100XLOC_024100Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039822-exon-sc0002206-1491911889:37442..37581TCONS_00039822-exon-sc0002206-1491911889:37442..37581Clytia hemisphaericaexon
TCONS_00039822-exon-sc0002206-1510915933:37442..37581TCONS_00039822-exon-sc0002206-1510915933:37442..37581Clytia hemisphaericaexon
TCONS_00039822-exon-sc0002206-1575043694:37442..37581TCONS_00039822-exon-sc0002206-1575043694:37442..37581Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002206supercontigsc0002206:37442..37581 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039822 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top