TCONS_00039809 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039809
Unique NameTCONS_00039809
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length84

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039809 ID=TCONS_00039809|Name=TCONS_00039809|organism=Clytia hemisphaerica|type=transcript|length=84bp
TGCAGACCAGAAAGCTAATTTGATGACCATCCATCGATAAGTTAGGCGGC
CGCCTGAAaagttaggcggccgcctaagaTGACA
Run BLAST on NCBI

transcript from alignment at sc0002205:26882..27146+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039809 ID=TCONS_00039809|Name=TCONS_00039809|organism=Clytia hemisphaerica|type=transcript|length=265bp|location=Sequence derived from alignment at sc0002205:26882..27146+ (Clytia hemisphaerica)
TGCAGACCAGAAAGCTAATTTGATGACCATCCATCGATAAGTTAGGCGGC
CGCCCGAAAAGATAGGCGGCCGCCTGAAaagttaggcggccgcctaagat
ttaacaagttaggCGGCCGCCTGAGTTAGAATAGGCGGCCGCCTAAGATT
CAAATATAAAATGCAGACCGGAAAGCTAATTTGATGACCATCCATCGATA
AGTTAGGGGGCCGCCCGAAAAGATAGGCGGCCGCCTGAAaagttaggcgg
ccgcctaagaTGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024091XLOC_024091Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039809-exon-sc0002205-1491911889:26882..26926TCONS_00039809-exon-sc0002205-1491911889:26882..26926Clytia hemisphaericaexon
TCONS_00039809-exon-sc0002205-1510915933:26882..26926TCONS_00039809-exon-sc0002205-1510915933:26882..26926Clytia hemisphaericaexon
TCONS_00039809-exon-sc0002205-1575043694:26882..26926TCONS_00039809-exon-sc0002205-1575043694:26882..26926Clytia hemisphaericaexon
TCONS_00039809-exon-sc0002205-1491911889:27108..27146TCONS_00039809-exon-sc0002205-1491911889:27108..27146Clytia hemisphaericaexon
TCONS_00039809-exon-sc0002205-1510915933:27108..27146TCONS_00039809-exon-sc0002205-1510915933:27108..27146Clytia hemisphaericaexon
TCONS_00039809-exon-sc0002205-1575043694:27108..27146TCONS_00039809-exon-sc0002205-1575043694:27108..27146Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002205supercontigsc0002205:26882..27146 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039809 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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