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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039806 ID=TCONS_00039806|Name=TCONS_00039806|organism=Clytia hemisphaerica|type=transcript|length=1258bp
TNCAGATGCACCTGTCTTCACTCTCTTCCTTGGATGGTCTTTCaacaaaa
tggaaagttaaGTGAACAGTCTTGTAAGTTCAAATTTCTATTCTCATCCT
CCCCCCTCCATCCAACATGATCAAATCTTGGTATCTTTTATGGTCTACCT
TGATGATACGTGTACGTCCCTGAGTTTGTTTTGCTGGTCATGGCACATGG
GCAATCTTAGTCGTGGAAAGGAACCACATTAGGTTTGCGTACCCTTGCTT
TGTTGGTTTCAAGTTGCAATTTTGTCTTTCATTTCTCTGGGGGGGCTTCT
ATAAACTATCCACCCATGTGCTCATATATCGGAAGTCGGGCAGTTGTTTT
CACCCCATTTTGTTTTTCCCTTCCTTTTAATCCCTGGTAACGTCCAATGA
CGTTGATACATTAGCCATTTCATTATTCTAGCCTACGAACCTTTGGAAGC
CTCGGTTGATAGCCCTGGGTTTCACGTGTTATCATCTTTTacctttttgt
ttttaactggGGTTTTTAACTATCCACCCATGGGTTCATTTGTCAAGTCG
GGCAGTTGTTTTTCACCCCATTTGTTCTCCCTTCTTTAATCCCTGTTGAT
ATCCAACGGTGTTGGTTGATACATTGGTAATTATTTCAGCTTTATAAAAT
GCACCTTTGGGAAATCTACTGGTTGGATAGCCCTGGGTTTATGTGTTATG
TTTCACCTTTTGTTTTTAACTGGGTTTCTCACTATCCACTGTTGACGTCC
AATGACGTCATGATGCATTGTTAATTATTTAGCCTATGAACTTTTGGAGA
CCTACTGGTTGGATAGCCCTGGGTTTCTGTGTTGTCatgttttacttttg
tttttaactgGGTTTCTCTGTAAGATGGACAGTTGTTTTTCACCCTTCTT
TTCTTCATCTTATCACTCATGCCGACGTCCAATGACGTCATGATACATTG
GTCATTACTTAGCCTATGAATTTTTTGGGAACCTACTGATTAGATAGCCC
TGGGTCTGTGCTGTCAtgtttacttttgttttagttGGGTTTCTAACTAT
CCACCCATGGGTTCACCTGTAAATTGGggagtttctttttctttttttca
cctGACCTTTTTTGTTTGTTCTCATTCTATTATGCCTGGCGACGTCTAAT
GACGTCATGATACGCTGGTAATAATCTTAGCCTATGATCCCATGCAAACC
TACTGGTTGGGTAGCTCTTGGTCTTGTGTCGTCAAGTTTTATTTTGTCTT
AACTGGGT Run BLAST on NCBI transcript from alignment at sc0002204:17359..18616 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039806 ID=TCONS_00039806|Name=TCONS_00039806|organism=Clytia hemisphaerica|type=transcript|length=1258bp|location=Sequence derived from alignment at sc0002204:17359..18616 (Clytia hemisphaerica)
ACCCAGTTAAGACAAAATAAAACTTGACGACACAAGACCAAGAGCTACCC
AACCAGTAGGTTTGCATGGGATCATAGGCTAAGATTATTACCAGCGTATC
ATGACGTCATTAGACGTCGCCAGGCATAATAGAATGAGAACAAACAAAAA
AGGTCaggtgaaaaaaagaaaaagaaactccCCAATTTACAGGTGAACCC
ATGGGTGGATAGTTAGAAACCCaactaaaacaaaagtaaacaTGACAGCA
CAGACCCAGGGCTATCTAATCAGTAGGTTCCCAAAAAATTCATAGGCTAA
GTAATGACCAATGTATCATGACGTCATTGGACGTCGGCATGAGTGATAAG
ATGAAGAAAAGAAGGGTGAAAAACAACTGTCCATCTTACAGAGAAACCca
gttaaaaacaaaagtaaaacatGACAACACAGAAACCCAGGGCTATCCAA
CCAGTAGGTCTCCAAAAGTTCATAGGCTAAATAATTAACAATGCATCATG
ACGTCATTGGACGTCAACAGTGGATAGTGAGAAACCCAGTTAAAAACAAA
AGGTGAAACATAACACATAAACCCAGGGCTATCCAACCAGTAGATTTCCC
AAAGGTGCATTTTATAAAGCTGAAATAATTACCAATGTATCAACCAACAC
CGTTGGATATCAACAGGGATTAAAGAAGGGAGAACAAATGGGGTGAAAAA
CAACTGCCCGACTTGACAAATGAACCCATGGGTGGATAGTTAAAAACCcc
agttaaaaacaaaaaggtAAAAGATGATAACACGTGAAACCCAGGGCTAT
CAACCGAGGCTTCCAAAGGTTCGTAGGCTAGAATAATGAAATGGCTAATG
TATCAACGTCATTGGACGTTACCAGGGATTAAAAGGAAGGGAAAAACAAA
ATGGGGTGAAAACAACTGCCCGACTTCCGATATATGAGCACATGGGTGGA
TAGTTTATAGAAGCCCCCCCAGAGAAATGAAAGACAAAATTGCAACTTGA
AACCAACAAAGCAAGGGTACGCAAACCTAATGTGGTTCCTTTCCACGACT
AAGATTGCCCATGTGCCATGACCAGCAAAACAAACTCAGGGACGTACACG
TATCATCAAGGTAGACCATAAAAGATACCAAGATTTGATCATGTTGGATG
GAGGGGGGAGGATGAGAATAGAAATTTGAACTTACAAGACTGTTCACtta
actttccattttgttGAAAGACCATCCAAGGAAGAGAGTGAAGACAGGTG
CATCTGNA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039806-exon-sc0002204-1491911889:17359..18616 | TCONS_00039806-exon-sc0002204-1491911889:17359..18616 | Clytia hemisphaerica | exon |
| TCONS_00039806-exon-sc0002204-1510915933:17359..18616 | TCONS_00039806-exon-sc0002204-1510915933:17359..18616 | Clytia hemisphaerica | exon |
| TCONS_00039806-exon-sc0002204-1575043694:17359..18616 | TCONS_00039806-exon-sc0002204-1575043694:17359..18616 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002204 | supercontig | sc0002204:17359..18616 . |
Blast
The following BLAST results are available for this feature:
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