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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039785 ID=TCONS_00039785|Name=TCONS_00039785|organism=Clytia hemisphaerica|type=transcript|length=278bp
TTTGAAGTATGATCTCTCTCACAATGAAGTGGTGAGCATCAAAGCAAATG
CTGCATGCAATAACCACTGGATATTTATTACAAGGAAATTTACTTTCAGa
agctaTAATCAAAATGGCAAGCAGCAAGGAAAGATAACATAAAGGAGAGC
TACCCAGGCAGATACCCGAGGTAAGGAGTTCAAATTATTGTTTATGTACG
AGTATTTTCAAGATAGCAGGAGTAACACATAGCATGCACCCCCTGAGCTT
AAGGGAGGGGCTAAACCATTGTTGCTAG Run BLAST on NCBI transcript from alignment at sc0002200:20127..21058- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039785 ID=TCONS_00039785|Name=TCONS_00039785|organism=Clytia hemisphaerica|type=transcript|length=932bp|location=Sequence derived from alignment at sc0002200:20127..21058- (Clytia hemisphaerica)
TTTGAAGTATGATCTCTCTCACAATGAAGTGGTGAGGCAAGTTTTATTGT
CGTACTCATTTTCAAGTTTCGTAATAATATGGGTTACTTATAATAGTCGA
AGTGTTTTTCCATCAACCTTAATCATGCAACATTCCTTGTGGTACATATT
ACTTCATATTAAACATTATCTTTGAAGAGTGAGATGTAAAAATTCAAAGT
TTATTATTCATCAATGAGATCTCTTCATGTATGTCTATCTTTCTTCAGTG
CAATGACTTTTTACAATGAAATTTTCAAATCTGTCTTGAATTTTTTTTGT
CAAGCCCGATATTAGAGATGGTAAATTCCTTTTCTTCTTTTTCTTCTAGC
ATCAAAGCAAATGCTGCATGCAATAACCACTGGATATTTATTACAAGGAA
ATTTACTTTCAGGTAAGTTATTCCTCTCAGGTTTTCCCTTAAAGAGAGAT
GATGTTTTGCTTTATACCCTAACCGTAGATCCTCTGCCAATATGGAGATG
TCTTTTTCTCTAGAAATTCTCAATTTTTATAGACCGCCACAGTGCTACGG
TGGCCTCAAAAGCTCACAGTATACTTGCAGTTCTGGCACACTTCCAGTTC
ACAAATTTTATAAGAACTGGAACTGTCCTGGATCAATGATGCAGAAGCAG
AAGACCCAGAAGGTTCTAATTACACACTGCGCTACGTTTTATGGTGAATC
TTACATGTTGTGTGTTAAATTTTGTTTCAGTTTAATTTGTTTTTCATTTT
CAGAAGCTATAATCAAAATGGCAAGCAGCAAGGAAAGATAACATAAAGGA
GAGCTACCCAGGCAGATACCCGAGGTAAGGAGTTCAAATTATTGTTTATG
TACGAGTATTTTCAAGATAGCAGGAGTAACACATAGCATGCACCCCCTGA
GCTTAAGGGAGGGGCTAAACCATTGTTGCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039785-exon-sc0002200-1575043694:21023..21058 | TCONS_00039785-exon-sc0002200-1575043694:21023..21058 | Clytia hemisphaerica | exon |
| TCONS_00039785-exon-sc0002200-1575043694:20647..20709 | TCONS_00039785-exon-sc0002200-1575043694:20647..20709 | Clytia hemisphaerica | exon |
| TCONS_00039785-exon-sc0002200-1575043694:20127..20305 | TCONS_00039785-exon-sc0002200-1575043694:20127..20305 | Clytia hemisphaerica | exon |
| TCONS_00039785-exon-sc0002200-1510915933:21023..21058 | TCONS_00039785-exon-sc0002200-1510915933:21023..21058 | Clytia hemisphaerica | exon |
| TCONS_00039785-exon-sc0002200-1510915933:20647..20709 | TCONS_00039785-exon-sc0002200-1510915933:20647..20709 | Clytia hemisphaerica | exon |
| TCONS_00039785-exon-sc0002200-1510915933:20127..20305 | TCONS_00039785-exon-sc0002200-1510915933:20127..20305 | Clytia hemisphaerica | exon |
| TCONS_00039785-exon-sc0002200-1491911889:21023..21058 | TCONS_00039785-exon-sc0002200-1491911889:21023..21058 | Clytia hemisphaerica | exon |
| TCONS_00039785-exon-sc0002200-1491911889:20647..20709 | TCONS_00039785-exon-sc0002200-1491911889:20647..20709 | Clytia hemisphaerica | exon |
| TCONS_00039785-exon-sc0002200-1491911889:20127..20305 | TCONS_00039785-exon-sc0002200-1491911889:20127..20305 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002200 | supercontig | sc0002200:20127..21058 - |
Blast
The following BLAST results are available for this feature:
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