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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039738 ID=TCONS_00039738|Name=TCONS_00039738|organism=Clytia hemisphaerica|type=transcript|length=1011bp
TGAACGATGgaattttcactttgtttacATCTTGAAAACGCACCACCAAA
AGAGATATTTGTTCGacaaagtatatattttttgaaagccCAAGCTCTTT
AGAATACAGTTTTTTAGTGCTCTTGCATATAGCCGAAACACCAATACAAT
ATACGTGTTTTGGATTGGCCAACAACCCCCTCTCAAAATGAGAAATCTCT
CATAACCTTGCCTTTTTGAGCATTTTAGAGTTATGCCCACTAAATCAATT
TCCAAGGCCCGACGGTTGTAATCGATAAAATTGATTATCGATTATAATCG
ATAGCTAAATTGATAAGTAAAATGGATAGATTAGCTATCGATTAGAACCG
AACTCGGTAGCTAATCAACAtccaaaaaattggaaacatcgaTTATATCA
ATCATCTTTTTGTACTAATCGCAGTGCTGTAGGAAGCATTTTTGGGGGGG
GAGGGGCTAAATTTCAGTGACACCGTGAGGACCAACCATGCATTGGCCCG
ATCATTAAATTCAGTTTTTGCAGAAAAccatttgtaaaaaaattattgct
gAACACTGTTAGAGATTATTTAGCTATATTACAGAAGCAGCCGCCGAGCC
ATTTTTACGAAATGtagaaattttttctaaaaatggccaACAGATCCATT
TTTCTATGGCCCGATCATTAAATTCAGTTTTTGCAGAAAaccatttttgt
aaaaaaattattgctgAACACTGAACAATGTTTAGAGATTATTTAGCTAT
ATTACAGAAGCAGCCGACGAGCCATTTTTACGAAATGtagaaattttttc
taaaaatggccaACAGATCCATTTTTCTATATGGGAGAAAGTTTTCTTCA
AGCTATCTGTTGGCCAccaacaaatcaaaatttataggAGAAGATTATAA
CAGATCAATTTTtattaaatgacgtcatttaatggccaacagatcaaaat
ttctaggagGGCTAACATATAGTCAAATCCTAATACAGCTAATAAAATCC
TTAAACGTTTC Run BLAST on NCBI transcript from alignment at sc0002187:9869..10879 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039738 ID=TCONS_00039738|Name=TCONS_00039738|organism=Clytia hemisphaerica|type=transcript|length=1011bp|location=Sequence derived from alignment at sc0002187:9869..10879 (Clytia hemisphaerica)
GAAACGTTTAAGGATTTTATTAGCTGTATTAGGATTTGACTATATGTTAG
CCctcctagaaattttgatctgttggccattaaatgacgtcatttaataA
AAATTGATCTGTTATAATCTTCTcctataaattttgatttgttggTGGCC
AACAGATAGCTTGAAGAAAACTTTCTCCCATATAGAAAAATGGATCTGTt
ggccatttttagaaaaaatttctaCATTTCGTAAAAATGGCTCGTCGGCT
GCTTCTGTAATATAGCTAAATAATCTCTAAACATTGTTCAGTGTTcagca
ataatttttttacaaaaatggtTTTCTGCAAAAACTGAATTTAATGATCG
GGCCATAGAAAAATGGATCTGTtggccatttttagaaaaaatttctaCAT
TTCGTAAAAATGGCTCGGCGGCTGCTTCTGTAATATAGCTAAATAATCTC
TAACAGTGTTcagcaataatttttttacaaatggTTTTCTGCAAAAACTG
AATTTAATGATCGGGCCAATGCATGGTTGGTCCTCACGGTGTCACTGAAA
TTTAGCCCCTCCCCCCCCAAAAATGCTTCCTACAGCACTGCGATTAGTAC
AAAAAGATGATTGATATAAtcgatgtttccaattttttggaTGTTGATTA
GCTACCGAGTTCGGTTCTAATCGATAGCTAATCTATCCATTTTACTTATC
AATTTAGCTATCGATTATAATCGATAATCAATTTTATCGATTACAACCGT
CGGGCCTTGGAAATTGATTTAGTGGGCATAACTCTAAAATGCTCAAAAAG
GCAAGGTTATGAGAGATTTCTCATTTTGAGAGGGGGTTGTTGGCCAATCC
AAAACACGTATATTGTATTGGTGTTTCGGCTATATGCAAGAGCACTAAAA
AACTGTATTCTAAAGAGCTTGggctttcaaaaaatatatactttgtCGAA
CAAATATCTCTTTTGGTGGTGCGTTTTCAAGATgtaaacaaagtgaaaat
tcCATCGTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039738-exon-sc0002187-1491911889:9869..10879 | TCONS_00039738-exon-sc0002187-1491911889:9869..10879 | Clytia hemisphaerica | exon |
| TCONS_00039738-exon-sc0002187-1510915933:9869..10879 | TCONS_00039738-exon-sc0002187-1510915933:9869..10879 | Clytia hemisphaerica | exon |
| TCONS_00039738-exon-sc0002187-1575043694:9869..10879 | TCONS_00039738-exon-sc0002187-1575043694:9869..10879 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002187 | supercontig | sc0002187:9869..10879 . |
Blast
The following BLAST results are available for this feature:
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