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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039727 ID=TCONS_00039727|Name=TCONS_00039727|organism=Clytia hemisphaerica|type=transcript|length=1206bp
GTTCTCTATAACTGCGAGGTAAAATGGTCCTGACTCACGCATGTGGAATG
GGCGGTGCGAAATATACTTCTCAAAGAAAACGACTGGGCAGTCATATTCC
TTAGTTTCGTACATTTTTGGTTGTATAATCCTAGGTTTAAAGTTGAGTCC
TTGATTATTTCTTTTCGTCAAGCCCTCTTTAAAAGCAACAAACTTTCGTC
CTTTAGAGTCTGTTTCAATAATAAAGTCCTCAACCTTTAACGAATAATGC
TCAGTTCTACCTCTCATTCCAAAATGCATGCAGTTATTCCACCAAACCGT
CTGGACCAAGGCTCTTGGTGATGACCCTCCAAATTGTTGACAATCCCAGA
GTTCTTGCTCCTCAGATTGATTCAAACTCCTGGCTCTGTTTGGGAGTTTT
CCTTTACCGTTTTGCCTGAGAATTCTAGCTTTTCCTTCTAAAATCTTCTT
TGATGACCTGAACGCATCGTCACGAAGGATTGACTTCTTGTATTCATTGT
CCTTGAGGTAcctgaataaaaatgaaaatttttaaaagtcatCTTTCatc
ttgtttcttataaaaaaaaggcaCTCCCAAAACATTTAACCCTAAGTCTG
TTAATTCAATTTCACCTCCAAAAACAAAACCTCCATTAAAAAGTACAATA
TGAAAGTCTGTATTCTGCTTACCTATCAAGGGCCGAAATCATAACTTTCA
AGCAGCCTGGCTCATACTCATCACCATCAGTTTTCCTCATTTCAGTATAA
AATCTTTCTAAGATTTTGTTAAGCTCCTCTGGATCGAATTCAAAGATCTT
CTTGGTAATTCCTCTGCTTTTGGACCAAGATTCGAAAACGTTTACCCAAG
TGTTTGTTGACTTTGAGGTATTTTTACTAGAGCTTGCAACTTGTAAGTCA
TTGATATCATTTCCATTTGATTTTGCAAAACGATTTGCCATTCTTGAAAA
CACTTTGCTTCGTCAAACACgctgttttgaaaaagaatctttttctaact
tttatatttttgtaaacattcgaaaatctcCTCAAACACgctgttttgaa
aaagaatctttttctaacttttatatttttgtaaacattcgaaaacctcc
tttttttcttttgtttaaaaagaaaacattgcagtgtaatttttctttgt
tcttttttatattgaagaaaaaaaatgtctttgttttttattatatagta
aaaaaa Run BLAST on NCBI protein sequence of TCONS_00039727-protein >TCONS_00039727-protein ID=TCONS_00039727-protein|Name=TCONS_00039727-protein|organism=Clytia hemisphaerica|type=polypeptide|length=99bp
FFYYIIKNKDIFFLQYKKEQRKITLQCFLFKQKKKRRFSNVYKNIKVRKR
FFFKTACLRRFSNVYKNIKVRKRFFFKTACLTKQSVFKNGKSFCKIKWK Run BLAST on NCBI transcript from alignment at sc0002182:22254..23459 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039727 ID=TCONS_00039727|Name=TCONS_00039727|organism=Clytia hemisphaerica|type=transcript|length=1206bp|location=Sequence derived from alignment at sc0002182:22254..23459 (Clytia hemisphaerica)
tttttttactatataataaaaaacaaagacattttttttcttcaatataa
aaaagaacaaagaaaaattacactgcaatgttttctttttaaacaaaaga
aaaaaaggaggttttcgaatgtttacaaaaatataaaagttagaaaaaga
ttctttttcaaaacagcGTGTTTGAGgagattttcgaatgtttacaaaaa
tataaaagttagaaaaagattctttttcaaaacagcGTGTTTGACGAAGC
AAAGTGTTTTCAAGAATGGCAAATCGTTTTGCAAAATCAAATGGAAATGA
TATCAATGACTTACAAGTTGCAAGCTCTAGTAAAAATACCTCAAAGTCAA
CAAACACTTGGGTAAACGTTTTCGAATCTTGGTCCAAAAGCAGAGGAATT
ACCAAGAAGATCTTTGAATTCGATCCAGAGGAGCTTAACAAAATCTTAGA
AAGATTTTATACTGAAATGAGGAAAACTGATGGTGATGAGTATGAGCCAG
GCTGCTTGAAAGTTATGATTTCGGCCCTTGATAGGTAAGCAGAATACAGA
CTTTCATATTGTACTTTTTAATGGAGGTTTTGTTTTTGGAGGTGAAATTG
AATTAACAGACTTAGGGTTAAATGTTTTGGGAGtgccttttttttataag
aaacaagatGAAAGatgacttttaaaaattttcatttttattcaggTACC
TCAAGGACAATGAATACAAGAAGTCAATCCTTCGTGACGATGCGTTCAGG
TCATCAAAGAAGATTTTAGAAGGAAAAGCTAGAATTCTCAGGCAAAACGG
TAAAGGAAAACTCCCAAACAGAGCCAGGAGTTTGAATCAATCTGAGGAGC
AAGAACTCTGGGATTGTCAACAATTTGGAGGGTCATCACCAAGAGCCTTG
GTCCAGACGGTTTGGTGGAATAACTGCATGCATTTTGGAATGAGAGGTAG
AACTGAGCATTATTCGTTAAAGGTTGAGGACTTTATTATTGAAACAGACT
CTAAAGGACGAAAGTTTGTTGCTTTTAAAGAGGGCTTGACGAAAAGAAAT
AATCAAGGACTCAACTTTAAACCTAGGATTATACAACCAAAAATGTACGA
AACTAAGGAATATGACTGCCCAGTCGTTTTCTTTGAGAAGTATATTTCGC
ACCGCCCATTCCACATGCGTGAGTCAGGACCATTTTACCTCGCAGTTATA
GAGAAC Coding sequence (CDS) from alignment at sc0002182:22254..23459 >TCONS_00039727 ID=TCONS_00039727|Name=TCONS_00039727|organism=Clytia hemisphaerica|type=CDS|length=300bp|location=Sequence derived from alignment at sc0002182:22254..23459 (Clytia hemisphaerica)
tttttttactatataataaaaaacaaagacattttttttcttcaatataa
aaaagaacaaagaaaaattacactgcaatgttttctttttaaacaaaaga
aaaaaaggaggttttcgaatgtttacaaaaatataaaagttagaaaaaga
ttctttttcaaaacagcGTGTTTGAGgagattttcgaatgtttacaaaaa
tataaaagttagaaaaagattctttttcaaaacagcGTGTTTGACGAAGC
AAAGTGTTTTCAAGAATGGCAAATCGTTTTGCAAAATCAAATGGAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039727-exon-sc0002182-1491911889:22254..23459 | TCONS_00039727-exon-sc0002182-1491911889:22254..23459 | Clytia hemisphaerica | exon |
| TCONS_00039727-exon-sc0002182-1510915933:22254..23459 | TCONS_00039727-exon-sc0002182-1510915933:22254..23459 | Clytia hemisphaerica | exon |
| TCONS_00039727-exon-sc0002182-1575043694:22254..23459 | TCONS_00039727-exon-sc0002182-1575043694:22254..23459 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002182 | supercontig | sc0002182:22254..23459 . |
Blast
The following BLAST results are available for this feature:
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