|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039713 ID=TCONS_00039713|Name=TCONS_00039713|organism=Clytia hemisphaerica|type=transcript|length=1016bp
CACAACAAAGAATCTCTGTTGCCTTTTCATTGTGACCATTTTGATCATGC
ATTTTTaagagtaaatttttaatcaattaattaatcaattaatcaattaa
TCAACAATAGGCAATCAAATCGAATCGAGTCTTCTCAGTCCTGAAAAATA
TCGACTGTCTATGATATTGCTCCATCTATTTGGTTAAGAGTCAATtttta
atcaatcaatcaatcaataatagGCAATCGAATCAAATTGGATTAGGAAG
AAGTTATAGGTTGTATTGATTAGGACATTCTCATTCAATCTCTTAGCTGT
ATTATTGTAAAAGTGGCAAAGAAAATTTCACCAGGAATGAGAAATTTTAG
CTATCCCCCCAGCAACAGTAGTAGTCTGGGAGGTAGAACCCCAATGGTCA
AAATGATATGTTGGTTGCTACCAAAATGCTGCTGATGGGCTAGCTACACA
GTACAGTAGGTTTGAGCTGCCACACTCACACACTGCTTGCTCTGCCTTGT
AATACAGATATGTGACTACTAGTCTAGTACACAGTACCGTGaggtcgggt
aacttgcatcagtggaggtaaaacttgcatagccatcaaatgactgctga
tgactgaccaatcaaagcagcaaaactTCAAAGCAAATGAAcgacgcagc
tccgctcgcagatCTACTCTAtataccatttttatttttatttagccTTG
TATTTTAATNaaacaaatgaactacgcagctccgctcgcagatCTACTCT
Atataccatttttatttttatttagccttgtattttaatgaccagacagg
taaTTCATTTGATCGGGCTATTATGCATGTTTGTCTCAACTGATGCTAGT
TACCCGATTTCATGGTAGATAGATAGGAGATAAACTTTTCTGCATAGCCA
TTGAATGACTAaccaaccaaagcagcaaaaaAAAGAACCATACAGCTCCG
CTCGCAGATCTGCTAgctctaccattttgttttgatttaactttggattt
taatgaccagccaggt Run BLAST on NCBI transcript from alignment at sc0002175:25560..26575 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039713 ID=TCONS_00039713|Name=TCONS_00039713|organism=Clytia hemisphaerica|type=transcript|length=1016bp|location=Sequence derived from alignment at sc0002175:25560..26575 (Clytia hemisphaerica)
acctggctggtcattaaaatccaaagttaaatcaaaacaaaatggtagag
cTAGCAGATCTGCGAGCGGAGCTGTATGGTTCTTTtttttgctgctttgg
ttggtTAGTCATTCAATGGCTATGCAGAAAAGTTTATCTCCTATCTATCT
ACCATGAAATCGGGTAACTAGCATCAGTTGAGACAAACATGCATAATAGC
CCGATCAAATGAAttacctgtctggtcattaaaatacaaggctaaataaa
aataaaaatggtataTAGAGTAGatctgcgagcggagctgcgtagttcat
ttgtttNATTAAAATACAAggctaaataaaaataaaaatggtataTAGAG
TAGatctgcgagcggagctgcgtcgTTCATTTGCTTTGAagttttgctgc
tttgattggtcagtcatcagcagtcatttgatggctatgcaagttttacc
tccactgatgcaagttacccgacctCACGGTACTGTGTACTAGACTAGTA
GTCACATATCTGTATTACAAGGCAGAGCAAGCAGTGTGTGAGTGTGGCAG
CTCAAACCTACTGTACTGTGTAGCTAGCCCATCAGCAGCATTTTGGTAGC
AACCAACATATCATTTTGACCATTGGGGTTCTACCTCCCAGACTACTACT
GTTGCTGGGGGGATAGCTAAAATTTCTCATTCCTGGTGAAATTTTCTTTG
CCACTTTTACAATAATACAGCTAAGAGATTGAATGAGAATGTCCTAATCA
ATACAACCTATAACTTCTTCCTAATCCAATTTGATTCGATTGCctattat
tgattgattgattgattaaaaATTGACTCTTAACCAAATAGATGGAGCAA
TATCATAGACAGTCGATATTTTTCAGGACTGAGAAGACTCGATTCGATTT
GATTGCCTATTGTTGAttaattgattaattgattaattaattgattaaaa
atttactcttAAAAATGCATGATCAAAATGGTCACAATGAAAAGGCAACA
GAGATTCTTTGTTGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039713-exon-sc0002175-1491911889:25560..26575 | TCONS_00039713-exon-sc0002175-1491911889:25560..26575 | Clytia hemisphaerica | exon |
| TCONS_00039713-exon-sc0002175-1510915933:25560..26575 | TCONS_00039713-exon-sc0002175-1510915933:25560..26575 | Clytia hemisphaerica | exon |
| TCONS_00039713-exon-sc0002175-1575043694:25560..26575 | TCONS_00039713-exon-sc0002175-1575043694:25560..26575 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002175 | supercontig | sc0002175:25560..26575 . |
Blast
The following BLAST results are available for this feature:
|
