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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039710 ID=TCONS_00039710|Name=TCONS_00039710|organism=Clytia hemisphaerica|type=transcript|length=704bp
GACACAACTGGGACAACTAAGGAGCCATCAGTCACAATGCTACAGCAGAA
GTATTCACGTTTGATTACTTCTCTTCAAACCTTCTCAACCAACGTCAAAA
AGCAGCTTGCCGACAGAGAGATCGATAAACTCTCGACATTCAAAGATTCG
ATCCTGAAAATCAAACTGCAGAAATTCAGTGGATTCGACTCAAAACTAGA
CATTTACTCATTCCAAACCGAGTTTGAGAAGCTCCACAAACGCCATACTC
CAAGATGCTACATGCCAGACCTTCTTCGCAACAATTATTTAGAGGATCCA
GCCCTGTCAATTGTGAAAGCTGAAACAAACATTGACGAAATCTGGAAACG
TCTAAAGTCATCATTCGGCAACACAAACATTTTATTGAACAATAAACTGC
AAGAGCTATCCAGTCTCGAAAATATCTGGAGGCTTAAAAATCCATCCAAA
ATTACTGAAGCTCTCACTAAGATCATCTCGCTCATGAAAGACCTAATGTC
ATTATCAGAACAACACAACATTGAAGCCAAGCTCTACAACAGTGATGGAA
TCCAACGTCTCTACAAATTGATTGGCGACTCTAGAACTACTCGATGGTTT
GAGTCTATTTGTGACCAAGATTTAGAGGGTAAAGAACTTTGGTTTCAACT
GATAGAATTTTTAGAGAGAGACTTAAAAGTTCAACAGCAAAAGCAACTCT
TGNC Run BLAST on NCBI protein sequence of TCONS_00039710-protein >TCONS_00039710-protein ID=TCONS_00039710-protein|Name=TCONS_00039710-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
DTTGTTKEPSVTMLQQKYSRLITSLQTFSTNVKKQLADREIDKLSTFKDS
ILKIKLQKFSGFDSKLDIYSFQTEFEKLHKRHTPRCYMPDLLRNNYLEDP
ALSIVKAETNIDEIWKRLKSSFGNTNILLNNKLQELSSLENIWRLKNPSK
ITEALTKIISLMKDLMSLSEQHNIEAKLYNSDGIQRLYKLIGDSRTTRWF
ESICDQDLEGKELWFQLIEFLERDLKVQQQKQLL Run BLAST on NCBI transcript from alignment at sc0002174:4582..5285 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039710 ID=TCONS_00039710|Name=TCONS_00039710|organism=Clytia hemisphaerica|type=transcript|length=704bp|location=Sequence derived from alignment at sc0002174:4582..5285 (Clytia hemisphaerica)
GNCAAGAGTTGCTTTTGCTGTTGAACTTTTAAGTCTCTCTCTAAAAATTC
TATCAGTTGAAACCAAAGTTCTTTACCCTCTAAATCTTGGTCACAAATAG
ACTCAAACCATCGAGTAGTTCTAGAGTCGCCAATCAATTTGTAGAGACGT
TGGATTCCATCACTGTTGTAGAGCTTGGCTTCAATGTTGTGTTGTTCTGA
TAATGACATTAGGTCTTTCATGAGCGAGATGATCTTAGTGAGAGCTTCAG
TAATTTTGGATGGATTTTTAAGCCTCCAGATATTTTCGAGACTGGATAGC
TCTTGCAGTTTATTGTTCAATAAAATGTTTGTGTTGCCGAATGATGACTT
TAGACGTTTCCAGATTTCGTCAATGTTTGTTTCAGCTTTCACAATTGACA
GGGCTGGATCCTCTAAATAATTGTTGCGAAGAAGGTCTGGCATGTAGCAT
CTTGGAGTATGGCGTTTGTGGAGCTTCTCAAACTCGGTTTGGAATGAGTA
AATGTCTAGTTTTGAGTCGAATCCACTGAATTTCTGCAGTTTGATTTTCA
GGATCGAATCTTTGAATGTCGAGAGTTTATCGATCTCTCTGTCGGCAAGC
TGCTTTTTGACGTTGGTTGAGAAGGTTTGAAGAGAAGTAATCAAACGTGA
ATACTTCTGCTGTAGCATTGTGACTGATGGCTCCTTAGTTGTCCCAGTTG
TGTC Coding sequence (CDS) from alignment at sc0002174:4582..5285 >TCONS_00039710 ID=TCONS_00039710|Name=TCONS_00039710|organism=Clytia hemisphaerica|type=CDS|length=702bp|location=Sequence derived from alignment at sc0002174:4582..5285 (Clytia hemisphaerica)
CAAGAGTTGCTTTTGCTGTTGAACTTTTAAGTCTCTCTCTAAAAATTCTA
TCAGTTGAAACCAAAGTTCTTTACCCTCTAAATCTTGGTCACAAATAGAC
TCAAACCATCGAGTAGTTCTAGAGTCGCCAATCAATTTGTAGAGACGTTG
GATTCCATCACTGTTGTAGAGCTTGGCTTCAATGTTGTGTTGTTCTGATA
ATGACATTAGGTCTTTCATGAGCGAGATGATCTTAGTGAGAGCTTCAGTA
ATTTTGGATGGATTTTTAAGCCTCCAGATATTTTCGAGACTGGATAGCTC
TTGCAGTTTATTGTTCAATAAAATGTTTGTGTTGCCGAATGATGACTTTA
GACGTTTCCAGATTTCGTCAATGTTTGTTTCAGCTTTCACAATTGACAGG
GCTGGATCCTCTAAATAATTGTTGCGAAGAAGGTCTGGCATGTAGCATCT
TGGAGTATGGCGTTTGTGGAGCTTCTCAAACTCGGTTTGGAATGAGTAAA
TGTCTAGTTTTGAGTCGAATCCACTGAATTTCTGCAGTTTGATTTTCAGG
ATCGAATCTTTGAATGTCGAGAGTTTATCGATCTCTCTGTCGGCAAGCTG
CTTTTTGACGTTGGTTGAGAAGGTTTGAAGAGAAGTAATCAAACGTGAAT
ACTTCTGCTGTAGCATTGTGACTGATGGCTCCTTAGTTGTCCCAGTTGTG
TC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039710-exon-sc0002174-1491911889:4582..5285 | TCONS_00039710-exon-sc0002174-1491911889:4582..5285 | Clytia hemisphaerica | exon |
| TCONS_00039710-exon-sc0002174-1510915933:4582..5285 | TCONS_00039710-exon-sc0002174-1510915933:4582..5285 | Clytia hemisphaerica | exon |
| TCONS_00039710-exon-sc0002174-1575043694:4582..5285 | TCONS_00039710-exon-sc0002174-1575043694:4582..5285 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002174 | supercontig | sc0002174:4582..5285 . |
Blast
The following BLAST results are available for this feature:
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