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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039672 ID=TCONS_00039672|Name=TCONS_00039672|organism=Clytia hemisphaerica|type=transcript|length=811bp
caggctttAATAACTTATGATCTAGTTGGGTTTTAATCGTGAAACTTTGC
AGGAATGTTccttacagtatgtggcccccaaaacggcgatcaaacgATTG
GCCTTAACAccgatgttttgatttttgatttcgaTATTATCTTTCTTATA
ACACTGAATGTTTtgttgaaatttctctcaaatctagaggaaaagagatt
ttacacgTACGAACTAATGCAGCGTGGTGTTTTGGCGAGGTCGCGAAGAt
gtaaaaatagaaataaacacGAATATGACGTGAATATGGAGCTTTCATAT
AATCAAAAGCGTTGGTAAGTAGTGGATTTATTATTAGTTTCGATattatt
acgatagcctttctgcaGCGGCGGTGGTGGTCGGAAGATGTTGATATGTT
TCTTCAGTTATCGACGGACcgtatttttcaactttataaCAAACTGCCCA
ATGgcctttttttcttataagcatcaaatcTATACTCTTAAGAAACTAAT
CGATAACTTGCGATCCAAGGGAAATTGGCTTTCGGCNattcttataagca
tcaactttataagaaactaatcgaTAACTTGCGATCCAAGGGAAATTGGC
TTTCGgcaattggttctttcaaagcaattCAGGGATCTTGCCCAACATGA
gcataatttatttttcttataaaccagctgcgctggaagctctaGCCGTA
AGCTGAGAAAGATGCAAGGATTAGATAAAATAAACAGGTCGGAAATGGAA
TGCAAAAAGGGGATTCATAATATGCATAACTTTTTTAGTCCTTAAGATAA
ACGAGTTTAGA Run BLAST on NCBI transcript from alignment at sc0002159:14522..15371+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039672 ID=TCONS_00039672|Name=TCONS_00039672|organism=Clytia hemisphaerica|type=transcript|length=850bp|location=Sequence derived from alignment at sc0002159:14522..15371+ (Clytia hemisphaerica)
caggctttAATAACTTATGATCTAGTTGGGTTTTAATCGTGAAACTTTGC
AGGAATGTTccttacagtatgtggcccccaaaacggcgatcaaacgATTG
GCCTTAACAccgatgttttgatttttgatttcgaTATTATCTTTCTTATA
ACACTGAATGTTTtgttgaaatttctctcaaatctagaggaaaagagatt
ttacacgTACGAACTAATGCAGCGTGGTGTTTTGGCGAGGTCGCGAAGAt
gtaaaaatagaaataaacacGAATATGACGTGAATATGGAGCTTTCATAT
AATCAAAAGCGTTGGTAAGTAGTGGATTTATTATTAGTTTCGATattatt
acgatagcctttctgcaGCGGCGGTGGTGGTCGGAAGATGTTGATATGTT
TCTTCAGTTATCGACGGCGCTAGATACCTAGCACAGAAGCATACCTTTTA
ATAAGGACcgtatttttcaactttataaCAAACTGCCCAATGgccttttt
ttcttataagcatcaaatcTATACTCTTAAGAAACTAATCGATAACTTGC
GATCCAAGGGAAATTGGCTTTCGGCNattcttataagcatcaactttata
agaaactaatcgaTAACTTGCGATCCAAGGGAAATTGGCTTTCGgcaatt
ggttctttcaaagcaattCAGGGATCTTGCCCAACATGAgcataatttat
ttttcttataaaccagctgcgctggaagctctaGCCGTAAGCTGAGAAAG
ATGCAAGGATTAGATAAAATAAACAGGTCGGAAATGGAATGCAAAAAGGG
GATTCATAATATGCATAACTTTTTTAGTCCTTAAGATAAACGAGTTTAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039672-exon-sc0002159-1491911889:14522..14937 | TCONS_00039672-exon-sc0002159-1491911889:14522..14937 | Clytia hemisphaerica | exon |
| TCONS_00039672-exon-sc0002159-1510915933:14522..14937 | TCONS_00039672-exon-sc0002159-1510915933:14522..14937 | Clytia hemisphaerica | exon |
| TCONS_00039672-exon-sc0002159-1575043694:14522..14937 | TCONS_00039672-exon-sc0002159-1575043694:14522..14937 | Clytia hemisphaerica | exon |
| TCONS_00039672-exon-sc0002159-1491911889:14977..15371 | TCONS_00039672-exon-sc0002159-1491911889:14977..15371 | Clytia hemisphaerica | exon |
| TCONS_00039672-exon-sc0002159-1510915933:14977..15371 | TCONS_00039672-exon-sc0002159-1510915933:14977..15371 | Clytia hemisphaerica | exon |
| TCONS_00039672-exon-sc0002159-1575043694:14977..15371 | TCONS_00039672-exon-sc0002159-1575043694:14977..15371 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002159 | supercontig | sc0002159:14522..15371 + |
Blast
The following BLAST results are available for this feature:
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