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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039634 ID=TCONS_00039634|Name=TCONS_00039634|organism=Clytia hemisphaerica|type=transcript|length=924bp
AAATTCTTATATCAAACAGTATAACTAAGGAAATGATAACTCCGtattaa
agtttaaaaacaaatgACAAAAGATGTGTATTGTGTCGTGTCGCGTTATA
ATGTTTTCAAAGTATCGTTTACAGGAAATTGATAAGTAGTgttatttata
acatttttatgtttaaaaataCTGTTTACGGGAAATTGTTTAAGTCGCgt
tatttgtaatattttgtaaacaaaataatGCATTGTATTTAAGTATTAGC
ATTTTATTTACAGAGATTTTCTagtaatttgatgttttttatgaattcat
gaaatgattttttttccaatcgcTAAAGGTATTTTATTACAAAGAAACTT
TATTATACTATACACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTGCCCCCTCTGCAGAGCAACACTCC
ATAGATATGACTTAAAGAGTCTGCAACGTGTAAAagttcaagttttgaaa
aaaaattttcgcataAATTACTAAGTCCATATCTGAAAAAATTCAGACAA
ACTTCTGCAAAATATCATGAGACACCTTGCAAATATAGCAAATTTAAGAT
CCCCCCTCCCCCAAAACAATGTTGAGTGCAGTAACAGCTTGATTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCTCCCCCAAAACAATGT
TGAGTGCAGTAACAGCTTGATTCCATAAACAACATTGTTTTGGGGGAGGG
GGGGTTGCTTTTTTGTAAAGTGTCTCACACATTTTGCAAAAGATTGTGGG
TTTTGCCTTgaaataaaaactaaatttccaaggatcattttgagcctaat
ttgatggttgtagcaccaacacagcaggttttagattttttttccaagca
aaatggcccgaaaatggcccattt Run BLAST on NCBI transcript from alignment at sc0002153:6648..7571 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039634 ID=TCONS_00039634|Name=TCONS_00039634|organism=Clytia hemisphaerica|type=transcript|length=924bp|location=Sequence derived from alignment at sc0002153:6648..7571 (Clytia hemisphaerica)
aaatgggccattttcgggccattttgcttggaaaaaaaatctaaaacctg
ctgtgttggtgctacaaccatcaaattaggctcaaaatgatccttggaaa
tttagtttttatttcAAGGCAAAACCCACAATCTTTTGCAAAATGTGTGA
GACACTTTACAAAAAAGCAACCCCCCCTCCCCCAAAACAATGTTGTTTAT
GGAATCAAGCTGTTACTGCACTCAACATTGTTTTGGGGGAGGGGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCAAGCTGTTACTGCACT
CAACATTGTTTTGGGGGAGGGGGGATCTTAAATTTGCTATATTTGCAAGG
TGTCTCATGATATTTTGCAGAAGTTTGTCTGAATTTTTTCAGATATGGAC
TTAGTAATTtatgcgaaaattttttttcaaaacttgaactTTTACACGTT
GCAGACTCTTTAAGTCATATCTATGGAGTGTTGCTCTGCAGAGGGGGCAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNATGTGTATAGTATAATAAAGTTTCTTTGTAATAAAATACCTTT
Agcgattggaaaaaaaatcatttcatgaattcataaaaaacatcaaatta
ctAGAAAATCTCTGTAAATAAAATGCTAATACTTAAATACAATGCattat
tttgtttacaaaatattacaaataacGCGACTTAAACAATTTCCCGTAAA
CAGtatttttaaacataaaaatgttataaataacACTACTTATCAATTTC
CTGTAAACGATACTTTGAAAACATTATAACGCGACACGACACAATACACA
TCTTTTGTcatttgtttttaaactttaataCGGAGTTATCATTTCCTTAG
TTATACTGTTTGATATAAGAATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039634-exon-sc0002153-1491911889:6648..7571 | TCONS_00039634-exon-sc0002153-1491911889:6648..7571 | Clytia hemisphaerica | exon |
| TCONS_00039634-exon-sc0002153-1510915933:6648..7571 | TCONS_00039634-exon-sc0002153-1510915933:6648..7571 | Clytia hemisphaerica | exon |
| TCONS_00039634-exon-sc0002153-1575043694:6648..7571 | TCONS_00039634-exon-sc0002153-1575043694:6648..7571 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002153 | supercontig | sc0002153:6648..7571 . |
Blast
The following BLAST results are available for this feature:
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