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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039595 ID=TCONS_00039595|Name=TCONS_00039595|organism=Clytia hemisphaerica|type=transcript|length=1065bp
NCTTTAAGTGCGTACAAATTGCCTACCGATCGACGCAGAATTTAAGGAAg
attccaaaaatacaaaaacgaaGCAAGCAAAAGtatttgtatcaaaggtt
aTGGCCCTTGGAGAACTGTTGGTATTTTGACACCTCTACGCCAACAAGGT
CAACtcggtcaaaatcgaaaaaaaattattaatgaatTCTACTCTAGGAA
TAATGcttaaaagtgaattttacCGTACTCCAGCGAGAATTAAGAGATTA
CAAATACAGACCCGGTGTGTGTAACGTTTTACTTGTTTCATAACTTCTCC
GATGGtcgatttcaaaatttcactgagttactgagacaggggtattacgG
TGGCACTCGAGGTGGCACTTAAAGAATTCAGAACCAGCGTGGAATCGCCA
TGAACACAAAGACAGGAGACAGTATTAATTCTATATGGTATTCAATGTTC
AGATGCATAGTATACTCGTAGTTGGCAGCAAACTTTTTAAGCTCTTATTT
GGNTGTATTCACATGAACAACAATGGACAATGAGTGACTATTAACATTTG
AACATTTATTCCTAGCTACTCTGAACACTAACAAGCCTCTTGGGATAGTG
TGGCAGTagtaattaaaaatgacatgatgacggcatttgatattttttaa
ttattcaataatTAACTACTTTCCATTTCTCGGTTCCGTATCACTTAACA
ACGCCTTCAACAATTTTCCGCCCTAACTTTAGAATGAAAATACGAAGAAT
AGACATTGTTTTTTGTTTAGTGAACCAAAGATTGTGTACAACTGGCTTTA
GTAGAACACAATGCCAAAGAAATCTCCAATCACGGTCGCTTCATTATTTC
TTATTCGGCATTTCAAAAAAGGGTCCGAAAATCAGaaggttttcttcttc
aatttccgaAGAACATGTTCCAAATCTTCGAAACCATATTTTTCCGATAG
CTTGATCGATCAGTGAACGGGATCTGAAAACAGAATGGAAAAAGACATCG
TCAGTAAAGTATGAGAGGCGATTAAACAAattatccgattcaccccgggt
atccgattcaccccg Run BLAST on NCBI transcript from alignment at sc0002146:2513..3615+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039595 ID=TCONS_00039595|Name=TCONS_00039595|organism=Clytia hemisphaerica|type=transcript|length=1103bp|location=Sequence derived from alignment at sc0002146:2513..3615+ (Clytia hemisphaerica)
NCTTTAAGTGCGTACAAATTGCCTACCGATCGACGCAGAATTTAAGGAAg
attccaaaaatacaaaaacgaaGCAAGCAAAAGtatttgtatcaaaggtt
aTGGCCCTTGGAGAACTGTTGGTATTTTGACACCTCTACGCCAACAAGGT
CAACtcggtcaaaatcgaaaaaaaattattaatgaatTCTACTCTAGGAA
TAATGcttaaaagtgaattttacCGTACTCCAGCGAGAATTAAGAGATTA
CAAATACAGACCCGGTGTGTGTAACGTTTTACTTGTTTCATAACTTCTCC
GATGGtcgatttcaaaatttcactgagttactgagacaggggtattacgG
TGGCACTCGAGGTGGCACTTAAAGAATTCAGAACCAGCGTGGAATCGCCA
TGAACACAAAGACAGGAGACAGTATTAATTCTATATGGTATTCAATGTTC
AGATGCATAGTATACTCGTAGTTGGCAGCAAACTTTTTAAGCTCTTATTT
GGNTGTATTCACATGAACAACAATGGACAATGAGTGACTATTAACATTTG
AACATTTATTCCTAGCTACTCTGAACACTAACAAGCCTCTTGGGATAGTG
TGGCAGTagtaattaaaaatgacatgatgacggcatttgatattttttaa
ttattcaataatTAACTACTTTCCATTTCTCGGTTCCGTATCACTTAACA
ACGCCTTCAACATGGGGCGCAAATGGGCGATTCGCGTTTTAACGCGAACA
ATTTTCCGCCCTAACTTTAGAATGAAAATACGAAGAATAGACATTGTTTT
TTGTTTAGTGAACCAAAGATTGTGTACAACTGGCTTTAGTAGAACACAAT
GCCAAAGAAATCTCCAATCACGGTCGCTTCATTATTTCTTATTCGGCATT
TCAAAAAAGGGTCCGAAAATCAGaaggttttcttcttcaatttccgaAGA
ACATGTTCCAAATCTTCGAAACCATATTTTTCCGATAGCTTGATCGATCA
GTGAACGGGATCTGAAAACAGAATGGAAAAAGACATCGTCAGTAAAGTAT
GAGAGGCGATTAAACAAattatccgattcaccccgggtatccgattcacc
ccg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039595-exon-sc0002146-1491911889:2513..3223 | TCONS_00039595-exon-sc0002146-1491911889:2513..3223 | Clytia hemisphaerica | exon |
| TCONS_00039595-exon-sc0002146-1510915933:2513..3223 | TCONS_00039595-exon-sc0002146-1510915933:2513..3223 | Clytia hemisphaerica | exon |
| TCONS_00039595-exon-sc0002146-1575043694:2513..3223 | TCONS_00039595-exon-sc0002146-1575043694:2513..3223 | Clytia hemisphaerica | exon |
| TCONS_00039595-exon-sc0002146-1491911889:3262..3615 | TCONS_00039595-exon-sc0002146-1491911889:3262..3615 | Clytia hemisphaerica | exon |
| TCONS_00039595-exon-sc0002146-1510915933:3262..3615 | TCONS_00039595-exon-sc0002146-1510915933:3262..3615 | Clytia hemisphaerica | exon |
| TCONS_00039595-exon-sc0002146-1575043694:3262..3615 | TCONS_00039595-exon-sc0002146-1575043694:3262..3615 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002146 | supercontig | sc0002146:2513..3615 + |
Blast
The following BLAST results are available for this feature:
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