TCONS_00039569 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039569
Unique NameTCONS_00039569
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2976

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039569 ID=TCONS_00039569|Name=TCONS_00039569|organism=Clytia hemisphaerica|type=transcript|length=2976bp
attttgtttaaaaaatgaatgaGATTGaaggaataaaaataaaaattgaa
gaagaagaaattcatGGTGGTGATGAAACGAATCATGAACATTTGGAAAT
TGTTATCAAACTGGAAAACGAATCAATTGGATATCCAGATGACGAAAATA
TGGAACCATTCAAAAACCATGAAAGTGAactatttgaaaattcttgtaga
aatgtAAAGGGGAACGATGTTACATCACCCCAAAAAACAAACCccaaaaa
ttgtgaaattatCAATAAACTTGAAGCTGAGTCAAAACCTCAAGATCATA
AGAATGAAAGTGTAAAATTAATGGATATTtcggaaaataaaaattcagaa
tataTTAACAATGGAATGAATTGTTTTGATCAGTTTTCACCGATTGAAGA
AATTAATTTACAGAATGGGGAGGAAATCactattaaatttgaaaatgaat
tggAAAGTTTTTCACaaccatgaaaatgaaaattcacaGGAATGTTTTGA
GGTTGATAAGATTGAAAATCCAAACATTGACGATATAACGAAAAGTTCGG
TTAAGGAATACCAAAGAACAGTTCACGATAAACCTTTTAAATGTCTTGTA
TATGGTAAGTCTTTTACATTGAAAAGTAATTTAAAGGTGCATCAAAGAAC
AGTCCATCAAGGTATAAAACCATTTttgtgtcaagaatgtggtaatattt
tggaaataaaacGAAATTTACTTCCCATCAAAGAACTGTCCATCAAGGCA
TAAAGGCCTTTAAATGTCAAGATTGTGGTAAATGTTTTGTAGATATAACC
AACTTANTGTGGTAAATATTTTGGAAATGAAACGAAATTTACTTCCCATC
GAAGAACTGTCCATCAAGGCATAAAGGCCTTTAAATGTCAAGATTGTGGT
AAATGTTTTGTAGATAAAACCAACTTAACTTCTCATCAAATAGCTGTCCA
TCAACTAGGTATAAAGGCTTTTAACTGTCAGGAATATGGTAAATCTTTTG
CTACAAAGTGAAGTTTGGCGATGCATCAAGTAACTGTTCATGAGGGGATA
AATCCTTTTgagtgtcaagaatgtggtaagtCTTTTGGAAGCAAATCGAA
CTTAACTTCGCACCAAAGAACTGTCCATCAAGGTATAAAGGCCTTTAAAT
GTCGAGAATGTTGTGAATCTTTTGCTTCTAAGAGAAATTTGGAGCGGCAT
CAAGTGACAGTCCATCAAGGTATAAAGGCTTTTGAGTGTCAGTAATGTGG
TATGCATTTTGGGCGGAAATATGATTCGGACAGTCATCAAAGAATTGTTC
ATGAGGGGATAAAGGCATttgaatgtcaagaatgtggtaaaactTTTGGA
CAGAAAAAGAACTTAACTTTGCATCAAAGAACTgttcatggaggtataaa
gccCTTTAAATGTTAGGAATGTGGTAAATCCTTTGGACAGAAAAAGAACT
TAACTTCTCATGGAATCAAAGAACTGTCCATGAAGGTATAAAGGCTTTTG
AGTGtcaggaatgtggtaaatgttttgctACAAAGAGTTATTTGAAGCGG
TATCAATTAACAGTTCATGATGGGATAAATGCCTtcaaatgtcaagaatg
tgATAAATGTTTTGCTACAATGAGTTATTTGAAGCGGCATCAATTAACAA
TTCCTGATGGGATAAATGCTTTTGAGTGtaaggaatgtggtaaatgtttt
gctACATAGACTTATTTGAAGCGGCATCAATTAAAAGTTCATGACGGAAT
AAAGCCTTTTCAATAtcaggaatgtggtaaatgttttacAGATAAAAGAA
AGTTAACTTCTCATCAAAGAACTGTCCATTAATGttaaaaagcctttaaa
tggcaagaatgtggtaaatcatTCGCTTCAAAGATAAATTTGGAGAGGCA
CCCATGGTAACAATCTTTGACAGAAAACCTTTTAAGTGTCAGGAATATGG
TACATATTCAGAGAGGAAGGTTCGATTAATAAAGAAACATGAAGGAGAAG
TACATAATAAAGTTTAAAAGATGCGGTCAGTGCATTtagattttttgttt
gcagaCGTGCCCAAAATGATTTTCACGAGGGATTGAAAGCTTTTACGTGT
GAAAAGTGTTGCAAATCTTTTGCAGGGAAAACTGATTTGAAGACGCCCTA
AGGAACAGGCCATGTGACGAATTGAAAACCTACCCCgttggaggtccttt
aaattaacccaagTTTGTGCTTTTCTCGtgattgattttttgatttcaaa
tttgttactttcttttttGCATGTAActgtatgtttttttctttagagta
ttatttttgaaaaatgaatgaaattgaagaaaaataaataaaaattgaac
aaGAAGAAGTTAATGGTTATGATGAAACGAAACATGAACATTTGGAAATT
GTTATCAAACTGGAAGATGAATCAAATGGATATCCAGACGACGAAATTTT
GGAACCATTAAAAAGTTATGAAAGTGAACTGTTTAAAAATTCTTCTAGAA
ATGTAAAGGGGAACAATTTAACCTCATCCGAAGAAACTGACcccaaaaat
tatgaaatcaCCATTAAACTTGAAGATGAGTCAAAACATCGATATAATAA
GGATCTAAAATTAACATTtcggaaaataaaaattcagaaaatattAATGA
TGGTACGAATCATTTTGATCAGTTCTCCGTAAATGAAGAAATGGTTTCAC
AGATTGGGGAGAAAATCACTATCAAATTTGAAGATGAATTCTTTCAAaac
catgaaaatgaaaatatacagGAATGTTTTGAGGCAGACAAGATCGAAAA
TCCAAACATTGATGAAATAATGAATAGTTCGATTAAGGAACATCAAAGAA
CTCTACATGATAAACCTtttaaatgtcaagaatgtggtaaatcttttgct
ACAAAGGGAAATTTGGTGAGGCACCAAAGAACAGTCCATGAAGGTATTAA
GGCATttgaatgtcaagaatgtgCTA
Run BLAST on NCBI

transcript from alignment at sc0002143:13224..27172+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039569 ID=TCONS_00039569|Name=TCONS_00039569|organism=Clytia hemisphaerica|type=transcript|length=13949bp|location=Sequence derived from alignment at sc0002143:13224..27172+ (Clytia hemisphaerica)
attttgtttaaaaaatgaatgaGATTGaaggaataaaaataaaaattgaa gaagaagaaattcatGGTGGTGATGAAACGAATCATGAACATTTGGAAAT TGTTATCAAACTGGAAAACGAATCAATTGGATATCCAGATGACGAAAATA TGGAACCATTCAAAAACCATGAAAGTGAactatttgaaaattcttgtaga aatgtAAAGGGGAACGATGTTACATCACCCCAAAAAACAAACCccaaaaa ttgtgaaattatCAATAAACTTGAAGCTGAGTCAAAACCTCAAGATCATA AGAATGAAAGTGTAAAATTAATGGATATTtcggaaaataaaaattcagaa tataTTAACAATGGAATGAATTGTTTTGATCAGTTTTCACCGATTGAAGA AATTAATTTACAGAATGGGGAGGAAATCactattaaatttgaaaatgaat tggAAAGTTTTTCACaaccatgaaaatgaaaattcacaGGAATGTTTTGA GGTTGATAAGATTGAAAATCCAAACATTGACGATATAACGAAAAGTTCGG TTAAGGAATACCAAAGAACAGTTCACGATAAACCTTTTAAATGTCTTGTA TATGGTAAGTCTTTTACATTGAAAAGTAATTTAAAGGTGCATCAAAGAAC AGTCCATCAAGGTATAAAACCATTTttgtgtcaagaatgtggtaatattt tggaaataaaacGAAATTTACTTCCCATCAAAGAACTGTCCATCAAGGCA TAAAGGCCTTTAAATGTCAAGATTGTGGTAAATGTTTTGTAGATATAACC AACTTANTGTGGTAAATATTTTGGAAATGAAACGAAATTTACTTCCCATC GAAGAACTGTCCATCAAGGCATAAAGGCCTTTAAATGTCAAGATTGTGGT AAATGTTTTGTAGATAAAACCAACTTAACTTCTCATCAAATAGCTGTCCA TCAACTAGGTATAAAGGCTTTTAACTGTCAGGAATATGGTAAATCTTTTG CTACAAAGTGAAGTTTGGCGATGCATCAAGTAACTGTTCATGAGGGGATA AATCCTTTTgagtgtcaagaatgtggtaagtCTTTTGGAAGCAAATCGAA CTTAACTTCGCACCAAAGAACTGTCCATCAAGGTATAAAGGCCTTTAAAT GTCGAGAATGTTGTGAATCTTTTGCTTCTAAGAGAAATTTGGAGCGGCAT CAAGTGACAGTCCATCAAGGTATAAAGGCTTTTGAGTGTCAGTAATGTGG TATGCATTTTGGGCGGAAATATGATTCGGACAGTCATCAAAGAATTGTTC ATGAGGGGATAAAGGCATttgaatgtcaagaatgtggtaaaactTTTGGA CAGAAAAAGAACTTAACTTTGCATCAAAGAACTgttcatggaggtataaa gccCTTTAAATGTTAGGAATGTGGTAAATCCTTTGGACAGAAAAAGAACT TAACTTCTCATGGAATCAAAGAACTGTCCATGAAGGTATAAAGGCTTTTG AGTGtcaggaatgtggtaaatgttttgctACAAAGAGTTATTTGAAGCGG TATCAATTAACAGTTCATGATGGGATAAATGCCTtcaaatgtcaagaatg tgATAAATGTTTTGCTACAATGAGTTATTTGAAGCGGCATCAATTAACAA TTCCTGATGGGATAAATGCTTTTGAGTGtaaggaatgtggtaaatgtttt gctACATAGACTTATTTGAAGCGGCATCAATTAAAAGTTCATGACGGAAT AAAGCCTTTTCAATAtcaggaatgtggtaaatgttttacAGATAAAAGAA AGTTAACTTCTCATCAAAGAACTGTCCATTAATGttaaaaagcctttaaa tggcaagaatgtggtaaatcatTCGCTTCAAAGATAAATTTGGAGAGGCA CCCATGGTAACAATCTTTGACAGAAAACCTTTTAAGTGTCAGGAATATGG TACATATTCAGAGAGGAAGGTTCGATTAATAAAGAAACATGAAGGAGAAG TACATAATAAAGTTTAAAAGATGCGGTCAGTGCATTtagattttttgttt gcagaCGTGCCCAAAATGATTTTCACGAGGGATTGAAAGCTTTTACGTGT GAAAAGTGTTGCAAATCTTTTGCAGGGAAAACTGATTTGAAGACGCCCTA AGGAACAGGCCATGTGACGAATTGAAAACCTACCCCgttggaggtccttt aaattaacccaagTTTGTGCTTTTCTCGtgattgattttttgatttcaaa tttgttactttcttttttGCATGTAActgtatgtttttttctttagagta ttatttttgaaaaatgaatgaaattgaagaaaaataaataaaaattgaac aaGAAGAAGTTAATGGTTATGATGAAACGAAACATGAACATTTGGAAATT GTTATCAAACTGGAAGATGAATCAAATGGATATCCAGACGACGAAATTTT GGAACCATTAAAAAGTTATGAAAGTGAACTGTTTAAAAATTCTTCTAGAA ATGTAAAGGGGAACAATTTAACCTCATCCGAAGAAACTGACcccaaaaat tatgaaatcaCCATTAAACTTGAAGATGAGTCAAAACATCGATATAATAA GGATCTAAAATTAACATTtcggaaaataaaaattcagaaaatattAATGA TGGTACGAATCATTTTGATCAGTTCTCCGTAAATGAAGAAATGGTTTCAC AGATTGGGGAGAAAATCACTATCAAATTTGAAGATGAATTCTTTCAAaac catgaaaatgaaaatatacagGAATGTTTTGAGGCAGACAAGATCGAAAA TCCAAACATTGATGAAATAATGAATAGTTCGATTAAGGAACATCAAAGAA CTCTACATGATAAACCTtttaaatgtcaagaatgtggtaaatcttttgct ACAAAGGGAAATTTGGTGAGGCACCAAAGAACAGTCCATGAAGGTATTAA GGCATTTGAGTGTCACGAATGTAGTCTCTTTTTTGGGCGGAAATATGATT TGGTGAGGCATCATAGAATTGTCCATGAAGGTATAAAAGCATTTGAGTGt caggaatgtggtaaatgttttgtagaaaaaagaaatttaacttctcatca tagaggtataaagaaagacaggagatgaatttgtcggtaattggtcgtta aagtcttttgatttctttttatgtaataaatcaaaagaaattctaggctc gcccgacgaaatacgactttttagtagaactcaagtctgTTCTGAACATT CTCACTATCAGCATCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNgatatatgagattatgagcatgcat acctcgtaatttttttaatcgtagggcgagcatggttacaatagcatact tctcctgtttctttatacctccatgttcTCATCAATTAAAAGTCCATGAG GGGATAAATCCTTTTGAGTGTCAAGAATGTGCTAAATCTTTTGCTACAAA GAGTTGTTTGGTGAGGCACCAAAGAACAATCCATGAAGGTATTAAGGCAT TTGAGTGTCAAGAATGTGCTAAATATTTTGCAACAAAGAGTTGTTTGGTG AGTCACCAAAGAACTGTCCATCAAGGTTTAAAGGCCTTTAAATGTCACGA ATGTGGTCTCTTTTTTGGGCGGAAATATGATTTGGTGAGgcatcatagaa ttttccatGAAGGTATAAAAGCATTTGAGTGTAAAGAATGTGGTGaatgt tttgtagaaaaaagaaatttaacttCTCATCAATTAACAATCCATGAGGG GATAAATCCTTTTGTGTGTGAAGAATGTGCTAAATCTTTTGCTACAAAGA GTTGTTTGGTGAGGCACCAAAGAACAATCCATGAAGGTATCAGGCCTttt aaatgtcaagaatgtggtaaatgttttgcaGAAAAAAGACAATCAACTTC TCATCACAGATTTGTCCATGAAGGTATAAAGCCTTAttaatgtcaagaat gtggtaaatgttttgctACAAACAGTTATTTGAAGCGGCATAAATTACTA GTTCATGATGAGATAAAGGATTTTGAGTGtcaggaatgtggtaaatgttt tgctACAAAGAGTTATCTGAAGCGGCATAGATTAACAGTTCATGACGGAT AAAGGCTTTTGAGTGTCAGGAATGTGGTAAATCGTTTGGAGAGAAATCGA ACTTAACTATGCATCAAAGAACTGTTCATCTAGATTAAAAGGCCTTTAAA TGTCAATAATCCAAATTAAATCTCTTGCTAcaaagatttatttttaaaaa ccccAAGGAACTGTCCATGATAAAGCCTTTTGAGTGTCAAAACTATGGAA ATTCTTTTGCTGAAAAAGGTTCGTTAtagaaacatcaaagaaaagcacAT GATAAAATCTAACCTTTTCAATGTCATGGACGTGGTCAATCTGtgtattt cgatttttttacaGACGCATCAAAAGGATGTTCACGAGAGAATGAAAGCT TTCACGTGTGAAAGTGTTGCAAATATTCTGCAtggaaaactaatttgaag acgCACCAATGAACAACCGACAAGgcgataagaacatttttggatACAAA GCTAACTCTTCTCCTGAATTGTccttttttggccaatttttctaaatcat aGGTGTGTTTCAGTTATGATGAAGTCATAGTGATGTCAACATAAGCTATT ACAATTTTGTCTCTTCTAAGGGTGAAACTTTTTGGatcgaaaagtttttt caaaattttatattgttGAATGGGtcgctatttttagaaaattattgTAC GGACAACCCCATTCCTTAATGAGTAATGAAGATGAccaatgaagaagaag aaatttaacttcttgtagaaaaATGCTATGATTTTCATTTTTGTAATGGA AATGCTTCAATATTACAACGTCATAACTGCTAAAAACAATTAAGAATATT CATTCAGTCAAAAACTACAGTTTAAAACTTCTTCATTTCCGAATTTTTGT TATATTTTTGTTTTTATTTTTATCATCGTTTTTATTTCTATTCCACTCAT TTTTATCTTTTCAACAAGCACTAAACTAAAATCAATTCGAATCAAAAGTT ACAGCCTCTTTTTTCTCCACTGCAGATTATAGCACCAAGACCGGTCTCAT TTTTAATGTACTCTAAATCGCTTGGGGGGTCACATATGTGTGTGATTATT TCTTTTCACCTTTTTGCTAGTTCTTGTACATTACAAGATCGAATAAAGTA TTTTGAAATAAAGAAATTTTTAGCAGTCATTTTTTTTTTAATTTATTCAA CAATTTTTCTTAACACTTCTTTAGACATTTTCAAGCATAATAATATCAAT TCTGCACTATATCTTTCTTTCATTTAGAGTATTTTGTTTAAAAAATGAAT GAGATTGAAGGAATAAAAATAAAAATTGAAGAAGAAGAAATTCATGGTGG TGATGAAACGAATCATGAACATTTGGAAATTGTTATCAAACTGGAAAACG AATCAATTGGATATCCAGATGACGAAAATATGGAACCATTCAAAAACCAT GAAAGTGAACTATTTGAAAATTCTTGTAGAAATGTAAAGGGGAACGATGT TACATCACCCGAAGAAACAAACcccaaaaattatgaaatcaCCATTAAAC TTGAAGATGAGTCAAAATCTCAAGATGATAAGAATCAAAGTGTACAATTA ATGGATATTTCGGAAAgtaaaaattcagaaaatattAACGATGGAATGAA TTTTGATCAGTTTTCACCGATTGAAGAAATTAATACACAGATTGGGGAGG AAATCACTATTAAATTGGAAaatgaattggaaagctttcacaaccatgaa aatgaaaattcacaGAAATGTTTTGAGGTTGATAAGATTGAAAATCCAAA CATTGGCGATATAACGAAAAGTTCGGTTAAGGAATGCCAAAGAACAGTTC ACGATAAACTTTTTAAATGTCTTGTATGTGGTAAGTCTTTTACATTGAAA AGTAATTTGAAGGTGCATCAAAGAACAGTCCATCAAGGTATAAAACCATT TttgtgtcaagaatgtggtaaatcttttggaAATAAAACGAAATTAGCTT CCCATCAAAGAACTGTACATCAAGGCATAAAGGCCTTTAAATGTCAAGAt tgtggtaaatgttttgctACAAAGAGAAATTTGGTGAGGCACCAAAAGAC AGTCCATCAAGGTATAAAGCCTtttaaatgtcaagaatgtggtaaatgct tTGTAGATAAAACCAAATTAACTTCTCATCAAATAGCTGTCCATCAACTA GATATAAAGGCTTTTAACTGTcaggaatgtggtaaatcttttgctACAAA GAGAAGTTTGGTGATGCATCAAGTAACTGTTCATGAGGGGATAAATCCTT TTgagtgtcaagaatgtggtaagtCTTTTGGAAGCAAATCGAACTTAACT TCGCACCAAAGAACTGTCCATCAAGGTATAAAGGCCTTTAAATGTCGAGA ATGTTGTGAATCTTTTGCTTCTAAGAGAAATTTGGAGCGGCATCAAGTGA CAGTCCATCAAGGTATAAAGGCTTTTGAGTGTCAGTAATGTGGTATGCAT TTTGGGCGGAAATATGATTCGGACAGTCATCAAAGAATTGTTCATGAGGG GATAAAGGCATttgaatgtcaagaatgtggtaaaactTTTGGACAGAAAA AGAACTTAACTTTGCATCAAAGAACTgttcatggaggtataaagccCTTT AAATATcaggaatgtggtaaatcttttggcCAAAAAACAAACTTAACTTC CCATCAAAGAACTGTCCATCAAGGTATAAAGCCCtttaaatgtcaagaat gtggtaaatcttttggcCAGAAAACGAACTTAACTTCCCATCAAAGAACT GTCCATAAAGGTATAAAGGTTTAAATTGTCGaaagtgtggtaaatctttt agaCAGAAAACGACCATAACCTCGCATAAGAACTTAACTTGGCACAGTAC TGTCCATCGAGgtataaaatgttttaaatgtcaagaatgtggtaaatatT TTTTAGGAAAAGAAATTGAACTTCTCATCAACGATTTGCCCATCAAAGTA TAAGGGCCTTTAAATGGCCTTAATTTTGTAAATGTTTTATAGAGAAAAGA AACCTAGCTTTTCACCAAATAATTGTTCATGAAGTTGTAAAGGCTTCTAA AATGTCAAGATTATGGTAAATCTTTTGGATGGAATATATATACTTCTCAT CAAAGAATTGTGCATCAAGGGATAAATCAAGGCATTTGATTCTCATTAAC GTGGTAAATCTTTCGGAGATAAAAGTAGCTTTTTAAGGATTATCACGAAC ATGTTCACGACagaataaaactttttaaatgtcaagaatgtggtaaatct tttgcaCAGAAAAGTCATTTAAAAGCACACCAAAGAACAGTGTATAAGAT ACAAAATCACTTGAGTGTCATTAATGTGGTAACATGTTTTGGAGATAACG GTTCGATAAAGAAACATCTAAAACAGTCTATGATAAAACGGAACCTTTTA AATGTCATGAATGTGGTAAGTATTTTGCATTTAGATTACACGAGGGATTG AAAGCTTTTCAAGGTAATTTTCAGAAGCATCAAGGGACAGTCCATAAAGA GATTTACAATTTTTCCTTTCTTAAAAATCCAAGATTTTAGTGATTCTTGT AAACGACCAACTGTGTCTGaaaggttttattttgattgaaaggtctgatt ATGCTGATGctgtcgtcctcagtcagtcaggatctagacaaattagaacc ttaccgtttccgtcgcagaaaaacgcCTGCACAACTCGGTATTACTAGAA AGTCACACCCAAAGATATTCTGGGGCATAATTCTTacttttgataccatt ttattttctagatttacaaaaatgtgttttgaaattaggctcttccagaa aaaatttcaacattgGGCTCGAGTATATAACCTTACGGGCATTAGGAAAT TAAACCCCCGGTTTGTAACTGTGACTTTTGAACCCCGGACATGATATCCT CCATCCCCATGCGGtgcaaaaattttctggaagagccactgacctttata taccccgGACGATGTAAATGCATTGAGAGCGCTATGTCTACTTTCcctca aatatttttgttgatgaagcgccgttagacgttaatttttaacactgcaa taacttctttacgggtaccagttcaaaaaaaaacttcagtCAAAGAcagc ggatatagcttggtcatccagggatatataaaggtcagtggaaaGAGCCC ATTAAAGAAATAATTGTAAAAATCAAAGAATAAATAATTGATTCTTTGGA AATCAATCAACAAAGTCCAGCTGAACAAGGAAAACAGGACGAAAGATAGA TGATGCTATAAACGAAATGGATTCTGAACGAAGTTTGGTTTTTCAAGAAA GAGAGGATACTAAAGTAAAACTTGTTAACAAATTATGAACCATAAGAAGT TTATTTCACCCAAGGATAGTAAATGATGCTCGATATAAAATAAAGTCTGG AATTAAAATAAGGAATGATAATTAAAGGAAGAGGAATTTAATACCTGGTT GCAGCAAATTCACGAAATTCGATTTTAGAGGAAGCTGCAGCAGTAGAAAA AAATAGTGAAGAAATTCTATTAATGAATGTCAAGAATAGAGTTGGAAATA ATAAAAAGATGACGGAGCTGTTTTTAGTTTTGAAAGATAGACCGTTTTTG AACGTCAAaaatgtggtaaatctttttcttcaaagagttacttgaaaaga caccaGAGAATGGTCCCTGAAGGGAAATTTTGTGTGTCAAAActatggaa atatttttggtgagAAATGTTCGTTaaagaaacatcaaagaaaagtaCAT GATAAAATGAAGTCTTTCTTGTGTCAAGAAAGTGgtaaatattttgcaca aaaaAGCCATCTGAATAAACCTATTATATCAATTGTCAAAGGAACATAAC AGTAAcagaaatttgtaaacaaactgtatgcatcacatacaaaatcaaaa caaatgtcacatgtcaaaaagaaatcaaaccaaatatggctaattttgat tgttcaattgttttacaagtttgttttagacacgtgattttaattgttct ctttaatgacacgtggttcgcgcaatgtttacattttactacctTTATGC CCCTTAAATGatgaaattaaataaattataataaacaaatttttaatGTA CACAAATAATGTACATTTTGAATGATTTGGAGTTCATGCGTTAGAGATTG ACTGACGGTTTTGACATTGTTGTTCGAATTGTTCGAAGGTCAATTatgat tttttatcaaaacttttgaagttaaaatttaGAATGTCCTTTTTCGAATT CACCAACAATCTTTCTTTAGATCTTTTTCAagcatcttttttttctttca tttagagtattttttttaagaaatgaatgagattgaagaaataaaaataa aaattgaagaagaagaatttcATGATTGTGACGAAACGAATCATGAACAT TTGGAAATTGTTATCAAACTGGAAGATGAATCAATCGGATATCCAGACAA CAAAAGTTTGGAAACATTCAAAAACTGTGAAAATGAACTATCGAtaattt cttgtagaaatgaAAAGGGGAACGATGTTACATCACCCAGAAAAACTGAC cccaaaaattatgaaatcaCCATTAAACTTGAAGACGAGTCAAAGTCTCA AGATGATAATAAGAATCAAAGTGCACAATTAATGGATATTTTGGAAAATA GAAATTCGGTAAATATTAACGATGGAATGAATTGTTTTGATCAGTTTTCA TCGATTGAAGAAATTAATTCACAGATCGGAGAGGAAATCACTATTAAATT TGATGATGAATtgcaaaagtttcaaaacaatgaaaatgaaagtctaCACG AAGGTATAAAGGCAATTGAGTGTCAGGAATGTGTTGAATCTTTTCCTACA AAGAGAAATTCGGTGATGCATCAAGTAACAGTCCATGAggaaataaatct ttttgagtgtcaagaatgtggtaagtCTTTCGGAAAGAAATCGAACTTAA CTTTGCACCAACGAACTGTCCATCAAGGTATAAAGGCCTTTACATGTCAc gaatgtggtaaatcttttggaCAGAAAGCGAACTTAACTTCTCACCGAAG AACTGTTCATCAAGGTATTAAGGCTtttaaatgtcaagaatgtggtctGC TTTTTGGGCGGAAATATGATTTGAAGAGGCATCATAGAATTGTCCATGAA GGTATAAAGGCATTTGAGTGTCAGGAATGTGGTGAATCTTTTGCTACAAA GAGAAATTTGGTGAAGCATCAAGTAACAGTCTATGAGGGAATAAATCCTT TTgagtgtcaagaatgtggtaagtCTTTCGGAAAGAAATCGAACTTTACT TCTCACCAAAGAACTGTCCATCAAGGTATTAAGGCCtttaaatgtcaaga atgtAGTAAATGTTTGGCAGAGAAAAGAAACTTAACTTCTCATCAAAGAA CTGTTCATGAAAGTGTACAGGCCTtcaaatgtcaagaatgtggtaaaatg tttttctacagaaagtaatttgaaaaaacatcaaaaaacggTCCATCAAG GTGTAAAAGCCTTTAACTGTCAAGAATGAAGTAAATGTTTTGcagagaaa aaaaacttatcTTGTCATCGAAGAACTGTTCATGAAGGTGTACTGTAAAG CCTTTTCAATGTCAAGAATATGGTAAAGCTTTTGGATGCAAGACGACCTT AACTTCTCAGAACTGTTCATGAAGGTGTAAAGGCCTTTAAATGCCAAGAA TGTGATAAGTTTTTTACGAGCAAAAGCTATTTGAAGGTGCATCAAAAAAC GGTCCATCAAGGTgtaaaagcctttaaatgtcaagaatgtAGTAAATGTT TTGGACAAAATACAGACTTATCTTCTCATCAAAGAACAGTCCATCAAGTA ATGAAACCATTTttgtgtcaagaatgtggtaaatcatTTGGGCAGAAAAC AAACCTAACTTCTCACCAAAGAACAGTACATGAAGGTGTAAAGGCCTTCA AATATCAAGAATGTGGTTGATGTTTTTCTACAAAGAGTTATTTAGAAAAG CACAGTCCATGATAAAGCCTTTTGAGTGTaagaaatgttgaaaaaatctt ttggagaGAAACGTTCCTTAAAAGTGCAAGTAAAATNCGTaagaaatgtt gaaaaaattttttggagaGAAACGTTCCGTAAAAGTGCAAGTAAACTTAT AAAATGAGACGAAGTATAAggacaaaatcaaaataattaaaCCATCAAAT CTCATCAAACTTTTCAACGTTTTCTGGATATTCAAGACACCTCTTAAACG TTCATTCCATAAGTACTCCCTTTCAGACAAAGAGTACTTTCCTCTAGAGT ATACGTTTTCAAGGTACTGAACTGAGAAATCAGTTTTCTCTTTACCAACA CTACAAGTTTTCGAGTTTTCCAAAACTGCTAAGTTTCGtgattttttgca aatgttCAATAAacctttgaccaaattttgtgGTAGTTTTaccaacattt tttttttttttaaagttgatgAATGAAGATGACGAATTAAGAAGAAGAAA TTTAAgttcttgtagaaaagtgctatgatcttcatttttgtaaTGTAGAT TCTTCATTAttacaacgtcataaatgctaaaatcaattgaaaaaataatc attcagtaaAAACTAcagttttaaaacttttatttcgaagatttttatat ttttgattttagttttatcatcatttttatttgtattCCACCCatattta tcttttcaacaagcattGTCATTGAACCGAAATCAATTCAAACAGCCTCT TTTGTCTCCTCTGCATATTATATTgcgacagactttaattttggcgaggg TGTCACTTACATGTGCTTACTTCGTTTCACCTTTTTGCTTCTTCTTGTAC ATCACAAGATCAAATAAAGTATTCCGACGTAAACAATTTAGAGCCGTCAT TTTTTAACTTAAACACtgctttaaatcttttttaaataatttcaattctt ttacaGTACTGTATCTTTCTTCTATCTTAGagtattttgtataaaaaatg aaCGAGTTTGAAGAGataaagataaaaattgaaCAAGAAGAAGATCATGG ATGTGATGAAACGAATCAAGAACATTTGGAAATTGTAATCAAACTGGAAG ATGAATCAATTGGATATGAAGATGCCGAAAATTTTGAACCAATTAAAAAC CATGAAAGTGAACTATCCGAAGAAACTAACCcacaaaattatgaaattag cATTAAACTTGAAGATGAGTCAAAACCTCAAGATAATCAAAGTACTAaat caatgcaatttttggaaaatcgaaATTCAGAAAATCTTAACGATGGAACA AATTGTTTTGATCAGTTTTCGCCGACTGCAGGAATGAGTTCACAGATCAG GGAGGAAATCACTATTAAATTTGAAGATGAATTGTTTCAAAACTATGANA CCTTTTTGCTTCTTCTTGTACATCACAAGATCAAATAAAGTATTCCGACG TAAACAATTTAGAGCTGTCATTTTTTAACTTAAACACtgctttaaatctt ttttaaataatttaaattcttttacAGTACTGTATCTTTCTTCTATCTTA GagtattttgtataaaaaatgaaCGAGTTTGAAGAGataaagataaaaat tgaaCAAGAAGAAGATCATGGATGTGATGAAACGAATCAAGAACATTTGG AAATTGTAATCAAACTGGAAGATGAATCAATTGGATATGAAGATGACGAA AATGTTGANTATCAAACTGGAAAATGAATCAATTGGTTATCCAGATGACG AAAATTTGGAACCATTCAAAAACTGCGAAAGCGAACTATCTAAAAATTCT TTTAGAAATGTAAAGGGGAACGATGTTACATCATCTGAAGAAACTGACCC GCAAAATTATGATATCACCATTAAACTTGAAGATGAGTCAAAACCTCAAG CTAATATGGATGAAAGTGTACAATTAATGGATATTTTGGAAAATCGAAAT TTAGTAAATATTAACGATGGAACGAATTGTTTTGATCAGTTTTCACCGAT TGAAGCAATTAATTCACAGATTGGGGAGGAAATCACTATTAAATTTGAAG ATGAATTGGAAAGGTTTGAAaaccatgaaaataaaaatctacaGGAATGT TTTGAGGTTGACAAGAATTCTAACAATGACGCAATAACGATGAGCTCGGT TAAGGAGCATCAAAGCAAAGTACTTGATAAACCTTTacaatgtcaagaat gtggtaaatcttttacTACAAAGAGAAGTCTGGAGATGCATCAAAGAACT GTCCATCAATATGTAAAagcttttggtaatttttttacTGCAAAGAGAAA TTTGGTGAGGCACCAAAGAATAGTCCATGAAGTTATTAAGGCATTTGAGT GTAAAGTATGTGGTAAACGTTttgtagaaaaaagaaattgaacttcTCAT CAATTAACAGTCCATGAGAGGATAAATCCTTTTgagtgtcaagaatgtgg taaatgttttgctGCACAGAGAAATTTGGTGAGGCACCAAAGAACAGTCC ATGAAGGTATTAAGGCAATTGAGTGTAAAGAATGTGGTAAACGTTttgta gaaaaaagaaatttaacttCTCGTCAATTAACAGTCATGAGGGGATAAAT CCTTTTgagtgtcaagaatgtggtaaatcttttgctACAAAGAGCAGTCT GGAGAGGCACCAAAGAACAGTTCATCAAGGTATGAAACCATTTttgtgtc aagaatgtggtaaatcttttggaaataaaaggAAATTAACTCTGCACCAA AGAACAGTTCATGAAGGTATTAAGGCATttgaatgtcaagaatgtgCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023898XLOC_023898Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039569-exon-sc0002143-1491911889:13224..16143TCONS_00039569-exon-sc0002143-1491911889:13224..16143Clytia hemisphaericaexon
TCONS_00039569-exon-sc0002143-1510915933:13224..16143TCONS_00039569-exon-sc0002143-1510915933:13224..16143Clytia hemisphaericaexon
TCONS_00039569-exon-sc0002143-1575043694:13224..16143TCONS_00039569-exon-sc0002143-1575043694:13224..16143Clytia hemisphaericaexon
TCONS_00039569-exon-sc0002143-1491911889:26857..26879TCONS_00039569-exon-sc0002143-1491911889:26857..26879Clytia hemisphaericaexon
TCONS_00039569-exon-sc0002143-1510915933:26857..26879TCONS_00039569-exon-sc0002143-1510915933:26857..26879Clytia hemisphaericaexon
TCONS_00039569-exon-sc0002143-1575043694:26857..26879TCONS_00039569-exon-sc0002143-1575043694:26857..26879Clytia hemisphaericaexon
TCONS_00039569-exon-sc0002143-1491911889:27140..27172TCONS_00039569-exon-sc0002143-1491911889:27140..27172Clytia hemisphaericaexon
TCONS_00039569-exon-sc0002143-1510915933:27140..27172TCONS_00039569-exon-sc0002143-1510915933:27140..27172Clytia hemisphaericaexon
TCONS_00039569-exon-sc0002143-1575043694:27140..27172TCONS_00039569-exon-sc0002143-1575043694:27140..27172Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002143supercontigsc0002143:13224..27172 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.291512 0 0 0 0 3.68322e-08 0.0138446 1.66618 0 0 0.446528 1.67075e-09 0.277524 0 0 0.0270845 0.0737969 0.100629 0 0 0 0.149996 0 0 0 0 0.000343212 0 0.21357 0.625607
Blast
BLAST of TCONS_00039569 vs. Swiss-Prot (Human)
Match: ZN160 (Zinc finger protein 160 OS=Homo sapiens GN=ZNF160 PE=2 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 2.037e-74
Identity = 126/311 (40.51%), Postives = 173/311 (55.63%), Query Frame = 1
Query:  535 ITKSSVKEYQRTVH--DKPFKCLVYGKSFTLKSNLKVHQRTVHQGIKPFLCQECGNILEIKRNLLPIKELSIKA*RXXXXXXXXXXXXXXXTXCGKYFGNETKFTSHRRTVHQGIKAFKCQDCGKCFVDKTNLTSHQIAVHQLGIKAFNCQEYGKSFATK*SLAMHQVTVHEGINPFECQECGKSFGSKSNLTSHQRTVHQGIKAFKCRECCESFASKRNLERHQVTVHQGIKAFECQ*CGMHFGRKYDSDSHQRIVHEGIKAFECQECGKTFGQKKNLTLHQRTVHGGIKPFKC*ECGKSFGQKKNLTSH 1461
             T++S     R +H  +KP+KC   GK+FT++SNL +HQ  +H G KP+ C ECG +      L   + +                       CGK F   +  T+H+  +H G K FKC +CGK F   ++L SH   +H  G K + C E GK+F+ + SLA+HQ T+H G  P++C ECGK F   S L  H+R VH G K +KC EC ++F+   NL  HQV +H G K F+C  C   F +     +H+RI H G K ++C ECGK F  + +LT HQ  +H G KP+KC ECGKSF QK +L SH
Sbjct:  266 FTQNSNLTSHRRIHSGEKPYKCSECGKTFTVRSNLTIHQ-VIHTGEKPYKCHECGKVFRHNSYLATHRRIHT------------GEKPYKCNECGKAFRGHSNLTTHQ-LIHTGEKPFKCNECGKLFTQNSHLISH-WRIH-TGEKPYKCNECGKAFSVRSSLAIHQ-TIHTGEKPYKCNECGKVFRYNSYLGRHRR-VHTGEKPYKCNECGKAFSMHSNLATHQV-IHTGTKPFKCNECSKVFTQNSQLANHRRI-HTGEKPYKCNECGKAFSVRSSLTTHQ-AIHSGEKPYKCIECGKSFTQKSHLRSH 555          

HSP 2 Score: 97.8265 bits (242), Expect = 2.037e-74
Identity = 56/142 (39.44%), Postives = 83/142 (58.45%), Query Frame = 3
Query: 1476 VHEGIKAFECQECGKCFATKSYLKRYQLTVHDGINAFKCQECDKCFATMSYLKRHQLTIPDGINAFECKECGKCFAT*TYLKRHQLKVHDGIKPFQYQECGKCFTDKRKLTSHQRTVH*C*KAFKWQECGKSFASKINLERH 1901
            VH G K ++C +CG+ F+ +S L  +Q  +H G   +KC EC K F   SYL  H+  I  G   ++C ECGK F+  + L  H++ +H G KP++  +CGK FT    L +HQRT H   K ++  ECGK+F+ + +L  H
Sbjct:  586 VHTGEKPYKCNDCGRAFSDRSSLTFHQ-AIHTGEKPYKCHECGKVFRHNSYLATHR-RIHTGEKPYKCNECGKAFSMHSNLTTHKV-IHTGEKPYKCNQCGKVFTQNSHLANHQRT-HTGEKPYRCNECGKAFSVRSSLTTH 723          

HSP 3 Score: 189.889 bits (481), Expect = 1.684e-65
Identity = 115/297 (38.72%), Postives = 159/297 (53.54%), Query Frame = 1
Query:  577 DKPFKCLVYGKSFTLKSNLKVHQRTVHQGIKPFLCQECGNILEIKRNLLPIKELSIKA*RXXXXXXXXXXXXXXXTXCGKYFGNETKFTSHRRTVHQGIKAFKCQDCGKCFVDKTNLTSHQIAVHQLGIKAFNCQEYGKSFATK*SLAMHQVTVHEGINPFECQECGKSFGSKSNLTSHQRTVHQGIKAFKCRECCESFASKRNLERHQVTVHQGIKAFECQ*CGMHFGRKYDSDSHQRIVHEGIKAFECQECGKTFGQKKNLTLHQRTVHGGIKPFKC*ECGKSFGQKKNLTSHGI 1467
            +KP+KC   GK+F+++S+L +HQ T+H G KP+ C ECG +      L   + +                       CGK F   +   +H+  +H G K FKC +C K F   + L +H+  +H  G K + C E GK+F+ + SL  HQ  +H G  P++C ECGKSF  KS+L SH R +H G K +KC EC + FA    L RH   VH G K ++C  CG  F  +     HQ I H G K ++C ECGK F     L  H+R +H G KP+KC ECGK+F    NLT+H +
Sbjct:  394 EKPYKCNECGKAFSVRSSLAIHQ-TIHTGEKPYKCNECGKVFRYNSYLGRHRRVHT------------GEKPYKCNECGKAFSMHSNLATHQ-VIHTGTKPFKCNECSKVFTQNSQLANHR-RIH-TGEKPYKCNECGKAFSVRSSLTTHQA-IHSGEKPYKCIECGKSFTQKSHLRSH-RGIHSGEKPYKCNECGKVFAQTSQLARHW-RVHTGEKPYKCNDCGRAFSDRSSLTFHQAI-HTGEKPYKCHECGKVFRHNSYLATHRR-IHTGEKPYKCNECGKAFSMHSNLTTHKV 669          

HSP 4 Score: 80.1073 bits (196), Expect = 1.684e-65
Identity = 45/119 (37.82%), Postives = 61/119 (51.26%), Query Frame = 3
Query: 1464 NQRTVHEGIKAFECQECGKCFATKSYLKRYQLTVHDGINAFKCQECDKCFATMSYLKRHQLTIPDGINAFECKECGKCFAT*TYLKRHQLKVHDGIKPFQYQECGKCFTDKRKLTSHQR 1820
            N +  H G K + C ECGK F+ +S L  +Q  +H G   +KC EC K F   ++L  H+  I  G   + C ECGK F   + L  H + +H G K ++  ECGK F     L SH R
Sbjct:  694 NHQRTHTGEKPYRCNECGKAFSVRSSLTTHQ-AIHTGKKPYKCNECGKVFTQNAHLANHR-RIHTGEKPYRCTECGKAFRVRSSLTTH-MAIHTGEKRYKCNECGKVFRQSSNLASHHR 809          

HSP 5 Score: 160.999 bits (406), Expect = 6.419e-64
Identity = 96/220 (43.64%), Postives = 124/220 (56.36%), Query Frame = 1
Query:  808 CGKYFGNETKFTSHRRTVHQGIKAFKCQDCGKCFVDKTNLTSHQIAVHQLGIKAFNCQEYGKSFATK*SLAMHQVTVHEGINPFECQECGKSFGSKSNLTSHQRTVHQGIKAFKCRECCESFASKRNLERHQVTVHQGIKAFECQ*CGMHFGRKYDSDSHQRIVHEGIKAFECQECGKTFGQKKNLTLHQRTVHGGIKPFKC*ECGKSFGQKKNLTSHGI 1467
            CGK F   +  TSHRR +H G K +KC +CGK F  ++NLT HQ+     G K + C E GK F     LA H+  +H G  P++C ECGK+F   SNLT+HQ  +H G K FKC EC + F    +L  H   +H G K ++C  CG  F  +     HQ I H G K ++C ECGK F     L  H+R VH G KP+KC ECGK+F    NL +H +
Sbjct:  262 CGKAFTQNSNLTSHRR-IHSGEKPYKCSECGKTFTVRSNLTIHQVI--HTGEKPYKCHECGKVFRHNSYLATHR-RIHTGEKPYKCNECGKAFRGHSNLTTHQ-LIHTGEKPFKCNECGKLFTQNSHLISHW-RIHTGEKPYKCNECGKAFSVRSSLAIHQTI-HTGEKPYKCNECGKVFRYNSYLGRHRR-VHTGEKPYKCNECGKAFSMHSNLATHQV 473          

HSP 6 Score: 103.99 bits (258), Expect = 6.419e-64
Identity = 60/146 (41.10%), Postives = 83/146 (56.85%), Query Frame = 3
Query: 1464 NQRTVHEGIKAFECQECGKCFATKSYLKRYQLTVHDGINAFKCQECDKCFATMSYLKRHQLTIPDGINAFECKECGKCFAT*TYLKRHQLKVHDGIKPFQYQECGKCFTDKRKLTSHQRTVH*C*KAFKWQECGKSFASKINLERH 1901
            N R +H G K ++C ECGK F+ +S L  +Q  +H G   +KC EC K F   S+L+ H+  I  G   ++C ECGK FA  + L RH  +VH G KP++  +CG+ F+D+  LT HQ  +H   K +K  ECGK F     L  H
Sbjct:  498 NHRRIHTGEKPYKCNECGKAFSVRSSLTTHQ-AIHSGEKPYKCIECGKSFTQKSHLRSHR-GIHSGEKPYKCNECGKVFAQTSQLARH-WRVHTGEKPYKCNDCGRAFSDRSSLTFHQ-AIHTGEKPYKCHECGKVFRHNSYLATH 639          

HSP 7 Score: 188.348 bits (477), Expect = 2.793e-49
Identity = 119/311 (38.26%), Postives = 169/311 (54.34%), Query Frame = 1
Query:  535 ITKSSVKEYQRTVH--DKPFKCLVYGKSFTLKSNLKVHQRTVHQGIKPFLCQECGNILEIKRNLLPIKELSIKA*RXXXXXXXXXXXXXXXTXCGKYFGNETKFTSHRRTVHQGIKAFKCQDCGKCFVDKTNLTSHQIAVHQLGIKAFNCQEYGKSFATK*SLAMHQVTVHEGINPFECQECGKSFGSKSNLTSHQRTVHQGIKAFKCRECCESFASKRNLERHQVTVHQGIKAFECQ*CGMHFGRKYDSDSHQRIVHEGIKAFECQECGKTFGQKKNLTLHQRTVHGGIKPFKC*ECGKSFGQKKNLTSH 1461
             T++S     R +H  +KP+KC   GK+F+++S+L  HQ  +H G KP+ C ECG     K +L   + +                       CGK F   ++   H R VH G K +KC DCG+ F D+++LT HQ A+H  G K + C E GK F     LA H+  +H G  P++C ECGK+F   SNLT+H + +H G K +KC +C + F    +L  HQ T H G K + C  CG  F  +    +HQ I H G K ++C ECGK F Q  +L  H+R +H G KP++C ECGK+F  + +LT+H
Sbjct:  490 FTQNSQLANHRRIHTGEKPYKCNECGKAFSVRSSLTTHQ-AIHSGEKPYKCIECGKSFTQKSHLRSHRGI------------HSGEKPYKCNECGKVFAQTSQLARHWR-VHTGEKPYKCNDCGRAFSDRSSLTFHQ-AIH-TGEKPYKCHECGKVFRHNSYLATHR-RIHTGEKPYKCNECGKAFSMHSNLTTH-KVIHTGEKPYKCNQCGKVFTQNSHLANHQRT-HTGEKPYRCNECGKAFSVRSSLTTHQAI-HTGKKPYKCNECGKVFTQNAHLANHRR-IHTGEKPYRCTECGKAFRVRSSLTTH 779          

HSP 8 Score: 182.57 bits (462), Expect = 2.056e-47
Identity = 113/301 (37.54%), Postives = 162/301 (53.82%), Query Frame = 1
Query:  565 RTVH--DKPFKCLVYGKSFTLKSNLKVHQRTVHQGIKPFLCQECGNILEIKRNLLPIKELSIKA*RXXXXXXXXXXXXXXXTXCGKYFGNETKFTSHRRTVHQGIKAFKCQDCGKCFVDKTNLTSHQIAVHQLGIKAFNCQEYGKSFATK*SLAMHQVTVHEGINPFECQECGKSFGSKSNLTSHQRTVHQGIKAFKCRECCESFASKRNLERHQVTVHQGIKAFECQ*CGMHFGRKYDSDSHQRIVHEGIKAFECQECGKTFGQKKNLTLHQRTVHGGIKPFKC*ECGKSFGQKKNLTSH 1461
            R VH  +KP+KC   GK+F++ SNL  HQ  +H G KPF C EC  +      L   + +                       CGK F   +  T+H+  +H G K +KC +CGK F  K++L SH+  +H  G K + C E GK FA    LA H   VH G  P++C +CG++F  +S+LT HQ  +H G K +KC EC + F     L  H+  +H G K ++C  CG  F    +  +H +++H G K ++C +CGK F Q  +L  HQRT H G KP++C ECGK+F  + +LT+H
Sbjct:  444 RRVHTGEKPYKCNECGKAFSMHSNLATHQ-VIHTGTKPFKCNECSKVFTQNSQLANHRRIHT------------GEKPYKCNECGKAFSVRSSLTTHQ-AIHSGEKPYKCIECGKSFTQKSHLRSHR-GIHS-GEKPYKCNECGKVFAQTSQLARHW-RVHTGEKPYKCNDCGRAFSDRSSLTFHQ-AIHTGEKPYKCHECGKVFRHNSYLATHR-RIHTGEKPYKCNECGKAFSMHSNLTTH-KVIHTGEKPYKCNQCGKVFTQNSHLANHQRT-HTGEKPYRCNECGKAFSVRSSLTTH 723          

HSP 9 Score: 166.007 bits (419), Expect = 4.686e-42
Identity = 110/294 (37.41%), Postives = 151/294 (51.36%), Query Frame = 1
Query:  577 DKPFKCLVYGKSFTLKSNLKVHQRTVHQGIKPFLCQECGNILEIKRNLL----------PIK------ELSIKA*RXXXXXXXXXXXXXXXTXCGKYFGNETKFTSHRRTVHQGIKAFKCQDCGKCFVDKTNLTSHQIAVHQLGIKAFNCQEYGKSFATK*SLAMHQVTVHEGINPFECQECGKSFGSKSNLTSHQRTVHQGIKAFKCRECCESFASKRNLERHQVTVHQGIKAFECQ*CGMHFGRKYDSDSHQRIVHEGIKAFECQECGKTFGQKKNLTLHQRTVHGGIKPFK 1410
            +KP+KC+  GKSFT KS+L+ H R +H G KP+ C ECG +      L           P K        S ++    +  I           CGK F + +   +HRR +H G K +KC +CGK F   +NLT+H++     G K + C + GK F     LA HQ T H G  P+ C ECGK+F  +S+LT+HQ  +H G K +KC EC + F    +L  H+  +H G K + C  CG  F  +    +H  I H G K ++C ECGK F Q  NL  H R +H G KP+K
Sbjct:  534 EKPYKCIECGKSFTQKSHLRSH-RGIHSGEKPYKCNECGKVFAQTSQLARHWRVHTGEKPYKCNDCGRAFSDRSSLTFHQAIHTGEKPYKCHECGKVFRHNSYLATHRR-IHTGEKPYKCNECGKAFSMHSNLTTHKVI--HTGEKPYKCNQCGKVFTQNSHLANHQRT-HTGEKPYRCNECGKAFSVRSSLTTHQ-AIHTGKKPYKCNECGKVFTQNAHLANHR-RIHTGEKPYRCTECGKAFRVRSSLTTHMAI-HTGEKRYKCNECGKVFRQSSNLASHHR-MHTGEKPYK 818          

HSP 10 Score: 152.14 bits (383), Expect = 1.210e-37
Identity = 90/212 (42.45%), Postives = 122/212 (57.55%), Query Frame = 1
Query:  826 NETKFTSHRRTVHQGIKAFKCQDCGKCFVDKTNLTSHQIAVHQLGIKAFNCQEYGKSFATK*SLAMHQVTVHEGINPFECQECGKSFGSKSNLTSHQRTVHQGIKAFKCRECCESFASKRNLERHQVTVHQGIKAFECQ*CGMHFGRKYDSDSHQRIVHEGIKAFECQECGKTFGQKKNLTLHQRTVHGGIKPFKC*ECGKSFGQKKNLTSH 1461
            N     + RR  +   K +KC +CGK F   +NLTSH+  +H  G K + C E GK+F  + +L +HQV +H G  P++C ECGK F   S L +H+R +H G K +KC EC ++F    NL  HQ+ +H G K F+C  CG  F +     SH RI H G K ++C ECGK F  + +L +HQ T+H G KP+KC ECGK F     L  H
Sbjct:  239 NHFSLLTQRRKANSCGKPYKCNECGKAFTQNSNLTSHR-RIHS-GEKPYKCSECGKTFTVRSNLTIHQV-IHTGEKPYKCHECGKVFRHNSYLATHRR-IHTGEKPYKCNECGKAFRGHSNLTTHQL-IHTGEKPFKCNECGKLFTQNSHLISHWRI-HTGEKPYKCNECGKAFSVRSSLAIHQ-TIHTGEKPYKCNECGKVFRYNSYLGRH 443          

HSP 11 Score: 97.8265 bits (242), Expect = 6.873e-32
Identity = 60/144 (41.67%), Postives = 79/144 (54.86%), Query Frame = 3
Query: 1470 RTVHEGIKAFECQECGKCFATKSYLKRYQLTVHDGINAFKCQECDKCFATMSYLKRHQLTIPDGINAFECKECGKCFAT*TYLKRHQLKVHDGIKPFQYQECGKCFTDKRKLTSHQRTVH*C*KAFKWQECGKSFASKINLERH 1901
            + +H G K ++C ECGK F   SYL  ++  +H G   +KC EC K F   S L  HQL I  G   F+C ECGK F   ++L  H  ++H G KP++  ECGK F+ +  L  HQ T+H   K +K  ECGK F     L RH
Sbjct:  304 QVIHTGEKPYKCHECGKVFRHNSYLATHR-RIHTGEKPYKCNECGKAFRGHSNLTTHQL-IHTGEKPFKCNECGKLFTQNSHLISH-WRIHTGEKPYKCNECGKAFSVRSSLAIHQ-TIHTGEKPYKCNECGKVFRYNSYLGRH 443          

HSP 12 Score: 59.6918 bits (143), Expect = 6.873e-32
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 1312 KAFECQECGKTFGQKKNLTLHQRTVHGGIKPFKC*ECGKSFGQKKNLTSHGI 1467
            K ++C ECGK F Q  NLT H+R +H G KP+KC ECGK+F  + NLT H +
Sbjct:  255 KPYKCNECGKAFTQNSNLTSHRR-IHSGEKPYKCSECGKTFTVRSNLTIHQV 305          

HSP 13 Score: 105.916 bits (263), Expect = 3.405e-23
Identity = 62/144 (43.06%), Postives = 84/144 (58.33%), Query Frame = 3
Query: 1470 RTVHEGIKAFECQECGKCFATKSYLKRYQLTVHDGINAFKCQECDKCFATMSYLKRHQLTIPDGINAFECKECGKCFAT*TYLKRHQLKVHDGIKPFQYQECGKCFTDKRKLTSHQRTVH*C*KAFKWQECGKSFASKINLERH 1901
            +T+H G K ++C ECGK F   SYL R++  VH G   +KC EC K F+  S L  HQ+ I  G   F+C EC K F   + L  H+ ++H G KP++  ECGK F+ +  LT+HQ  +H   K +K  ECGKSF  K +L  H
Sbjct:  416 QTIHTGEKPYKCNECGKVFRYNSYLGRHR-RVHTGEKPYKCNECGKAFSMHSNLATHQV-IHTGTKPFKCNECSKVFTQNSQLANHR-RIHTGEKPYKCNECGKAFSVRSSLTTHQ-AIHSGEKPYKCIECGKSFTQKSHLRSH 555          

HSP 14 Score: 103.605 bits (257), Expect = 1.886e-22
Identity = 62/146 (42.47%), Postives = 83/146 (56.85%), Query Frame = 3
Query: 1464 NQRTVHEGIKAFECQECGKCFATKSYLKRYQLTVHDGINAFKCQECDKCFATMSYLKRHQLTIPDGINAFECKECGKCFAT*TYLKRHQLKVHDGIKPFQYQECGKCFTDKRKLTSHQRTVH*C*KAFKWQECGKSFASKINLERH 1901
            + R +H G K ++C ECGK F  +S L  +Q+ +H G   +KC EC K F   SYL  H+  I  G   ++C ECGK F   + L  HQL +H G KPF+  ECGK FT    L SH R +H   K +K  ECGK+F+ + +L  H
Sbjct:  274 SHRRIHSGEKPYKCSECGKTFTVRSNLTIHQV-IHTGEKPYKCHECGKVFRHNSYLATHR-RIHTGEKPYKCNECGKAFRGHSNLTTHQL-IHTGEKPFKCNECGKLFTQNSHLISHWR-IHTGEKPYKCNECGKAFSVRSSLAIH 415          

HSP 15 Score: 98.2117 bits (243), Expect = 9.099e-21
Identity = 56/144 (38.89%), Postives = 81/144 (56.25%), Query Frame = 3
Query: 1470 RTVHEGIKAFECQECGKCFATKSYLKRYQLTVHDGINAFKCQECDKCFATMSYLKRHQLTIPDGINAFECKECGKCFAT*TYLKRHQLKVHDGIKPFQYQECGKCFTDKRKLTSHQRTVH*C*KAFKWQECGKSFASKINLERH 1901
            + +H G K ++C ECGK F   SYL  ++  +H G   +KC EC K F+  S L  H++ I  G   ++C +CGK F   ++L  HQ + H G KP++  ECGK F+ +  LT+HQ  +H   K +K  ECGK F    +L  H
Sbjct:  612 QAIHTGEKPYKCHECGKVFRHNSYLATHR-RIHTGEKPYKCNECGKAFSMHSNLTTHKV-IHTGEKPYKCNQCGKVFTQNSHLANHQ-RTHTGEKPYRCNECGKAFSVRSSLTTHQ-AIHTGKKPYKCNECGKVFTQNAHLANH 751          

HSP 16 Score: 97.4413 bits (241), Expect = 1.422e-20
Identity = 56/144 (38.89%), Postives = 81/144 (56.25%), Query Frame = 3
Query: 1470 RTVHEGIKAFECQECGKCFATKSYLKRYQLTVHDGINAFKCQECDKCFATMSYLKRHQLTIPDGINAFECKECGKCFAT*TYLKRHQLKVHDGIKPFQYQECGKCFTDKRKLTSHQRTVH*C*KAFKWQECGKSFASKINLERH 1901
            R +H G K ++C ECGK F+  S L  +++ +H G   +KC +C K F   S+L  HQ T   G   + C ECGK F+  + L  HQ  +H G KP++  ECGK FT    L +H+R +H   K ++  ECGK+F  + +L  H
Sbjct:  640 RRIHTGEKPYKCNECGKAFSMHSNLTTHKV-IHTGEKPYKCNQCGKVFTQNSHLANHQRTH-TGEKPYRCNECGKAFSVRSSLTTHQA-IHTGKKPYKCNECGKVFTQNAHLANHRR-IHTGEKPYRCTECGKAFRVRSSLTTH 779          

HSP 17 Score: 90.8929 bits (224), Expect = 1.875e-18
Identity = 57/139 (41.01%), Postives = 75/139 (53.96%), Query Frame = 3
Query: 1491 KAFECQECGKCFATKSYLKRYQLTVHDGINAFKCQECDKCFATMSYLKRHQLTIPDGINAFECKECGKCFAT*TYLKRHQLKVHDGIKPFQYQECGKCFTDKRKLTSHQRTVH*C*KAFKWQECGKSFASKINLERHPW 1907
            K ++C ECGK F   S L  ++  +H G   +KC EC K F   S L  HQ+ I  G   ++C ECGK F   +YL  H+ ++H G KP++  ECGK F     LT+HQ  +H   K FK  ECGK F    +L  H W
Sbjct:  255 KPYKCNECGKAFTQNSNLTSHR-RIHSGEKPYKCSECGKTFTVRSNLTIHQV-IHTGEKPYKCHECGKVFRHNSYLATHR-RIHTGEKPYKCNECGKAFRGHSNLTTHQ-LIHTGEKPFKCNECGKLFTQNSHLISH-W 388          
The following BLAST results are available for this feature:
BLAST of TCONS_00039569 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN1602.037e-7440.51Zinc finger protein 160 OS=Homo sapiens GN=ZNF160 ... [more]
back to top