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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039554 ID=TCONS_00039554|Name=TCONS_00039554|organism=Clytia hemisphaerica|type=transcript|length=719bp
atagtaatgtCACGGGCGGGCCGCTACGGCTCAATAAGTAACTCCCGACA
ATTATCCTCAACAGCAATATTTATATTTGTCCCCGGACTAGTTCAGGATC
CCAAGCTATTATTGGAAGAGAACCGGTTAGGTATTATAGAATTCAAAGCA
CGAGTAGTAGCAAGGTTTAAGTTTGATGCATCAATTcttcaataaaataa
ataaccATAAAATCTACGTAGTAAAGTCTCTGTAATTAAATCAGTCCATA
GTCCGTGTCTGCCATTTAACATTTACCCTCCGCTGTTGGCTCAGCGGAGA
CTCTGCTTCATTTCGTCAGTACCATTTAACATTTACCCTCCGCAGTTGGC
TCTGCAGAGACTCTGCTTCATTTCGTCAGTACCATTTAACATTTACCCTC
CGCAGTTGGCTCTGCGGAGTCTCTGCTTCATTTAATTCGTCACGCTTCAT
AAGCGTCAGTTTACATGTATACTTGGGTGTCAAACAATAAATCTCCCCAA
ACAGGGAGAACCCACCTCGATCAGAGGCAGTTTGAAAGACCCCGTTCGTT
TGTCTGTTTTCGTATTTCGTTTGAAAATGCACAATATGTGCATAGTGGCT
TTCCACAGTTCATCACGTGAcagtaatgaactatagcttaattgtttgat
gtcatagaaacagtgctacaatgctaaagagaagtatactttgagcttct
cgtggggggggggggttgg Run BLAST on NCBI transcript from alignment at sc0002142:24085..24998- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039554 ID=TCONS_00039554|Name=TCONS_00039554|organism=Clytia hemisphaerica|type=transcript|length=914bp|location=Sequence derived from alignment at sc0002142:24085..24998- (Clytia hemisphaerica)
ATAGTAATGTCACGGGCGGGCCGCTACGGCTCAATAAGTAACTCCCGACA
ATTATCCTCAACAGCAATATTTATATTTGTCCCCGGACTAGTTCAGGATC
CCAAGCTATTATTGGAAGAGAACCGGTTAGGTATTATAGAATTCAAAGCA
CGAGTAGTAGCAAGGTTTAAGTTTGATGCATCAATTCTTCAATAAAATAA
ATAACCATAAAATCTACGTAGTAAAGTCTCTGTAATTAAATCAGTCCATA
GTCCGTGTCTGCCATTTAACATTTACCCTCCGCTGTTGGCTCAGCGGAGA
CTCTGCTTCATTTTGTCTCAGTCCAGCCATTTAACATTTACCCTCCGCTG
TTGGCTCAGCGGAGACTCTGCTTCATTTTGTCTCAGTCCAGCCATTTAAC
ATTTACCCTCCGCTGTTGGCTCAGCGGAGACTCTGCTTCATTTTGTCTCA
GTCCAGCCATTTAACATTTACCCTCCGCTGTTGGCTCAGCGGAGACTCTG
CTTCATTTCGTCAGTACCATTTAACATTTACCCTCCGCAGTTGGCTCTGC
AGAGACTCTGCTTCATTTCGTCAGTACCATTTAACATTTACCCTCCGCAG
TTGGCTCTGCGGAGTCTCTGCTTCATTTAATTCGTCACGCTTCATAAGCG
TCAGTTTACATGTATACTTGGGTGTCAAACAATAAATCTCCCCAAACAGG
GAGAACCCACCTCGATCAGAGGCAGTTTGAAAGACCCCGTTCGTTTGTCT
GTTTTCGTATTTCGTTTGAAAATGCACAATATGTGCATAGTGGCTTTCCA
CAGTTCATCACGTGACAGTAATGAACTATAGCTTAATTGTTTGATGTCAT
AGAAACAGTGCTACAATGCTAAAGAGAAGTATACTTTGAGCTTCTCGTGG
GGGGGGGGGGTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039554-exon-sc0002142-1575043694:24729..24998 | TCONS_00039554-exon-sc0002142-1575043694:24729..24998 | Clytia hemisphaerica | exon |
| TCONS_00039554-exon-sc0002142-1575043694:24085..24533 | TCONS_00039554-exon-sc0002142-1575043694:24085..24533 | Clytia hemisphaerica | exon |
| TCONS_00039554-exon-sc0002142-1510915933:24729..24998 | TCONS_00039554-exon-sc0002142-1510915933:24729..24998 | Clytia hemisphaerica | exon |
| TCONS_00039554-exon-sc0002142-1510915933:24085..24533 | TCONS_00039554-exon-sc0002142-1510915933:24085..24533 | Clytia hemisphaerica | exon |
| TCONS_00039554-exon-sc0002142-1491911889:24729..24998 | TCONS_00039554-exon-sc0002142-1491911889:24729..24998 | Clytia hemisphaerica | exon |
| TCONS_00039554-exon-sc0002142-1491911889:24085..24533 | TCONS_00039554-exon-sc0002142-1491911889:24085..24533 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002142 | supercontig | sc0002142:24085..24998 - |
Blast
The following BLAST results are available for this feature:
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