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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039550 ID=TCONS_00039550|Name=TCONS_00039550|organism=Clytia hemisphaerica|type=transcript|length=1384bp
ACATTCCATCTATAATATCACAGCTTCTGCTAATAGTACACTTTCACTCA
TAAAATTTTGTCTTCATTTTCAGGTTCTTCATCCTCACAGCACACAGAGG
TGTCCTTCCTGTTTACACGTGTCCATACACACAAAATACGAGCTGGAACA
AGTGTTATTTTTTATGAACGTAGAGTGTTGAGATGAAACATACGAAGTCT
GTGGTGGTGGCGCATAGTGTGAAAATAATGCTTGTCTACTAGTTGTGAGC
TTATGATCAACTTCTCACCTGGATTTAACCATTGTCATacaagaagaaaa
attatcatGTTGGATTTCAAATAAAACGTAATTGGCAATAAACTGAATTT
AACGTGCAACTCCATTTTCCACCTGTATATATAGACAACGACAAAATTGA
GTTTGGTTACCATGTTAGTGTGGTGGATGATCCTAGTAAAATACACAGTT
ATGAACTGCTTGACCAACATTCctcgagaaaaaaaacaccGATAATATgc
acaataaaaatgaaaatcatcaTCAGGCTTTTGGTACTATATTTGTTTGC
TGATAGATAGAAACACTCATTATGGTTCCACAACAAAAGGGGCAGAAATT
CATATATGTGCATTCCTTGTTCTTTACAGTCACTAGGTTTTAAGTTGTTG
CCATCTGGTATCTTCAAATGAATACTGTTGAATATATAATTCTAGCTGTc
tagctgtttttttttatcttactaaaaagaaattaagttAATTAAAAGTT
CAAATTATTTCAAGTGGCTGAAAATGGCTTTGAAATTGAgggtattatta
ttttttctactaTGGCTTATTataatttggactgaaaaatgTTTCCATTA
TTTCTTGATTtaaagttgttgtttttttaagaaaagttcactTAAATTGT
TTGTTGCAACTTATTCCAAATTGACCCTGAATTcctgttttgaaattgaa
atttttcttcacGTGTAATTGTAAATTGTATGATTTGATataccgtgaag
ttgggtaacttgcatcagtggaggaaaacttgcatagccattaaatgact
gaccaatcaaagcagcaaaatttcaaaacaaatgaactaagcagctccgc
tcacagctgTACTCtactaccatttttgtttagatttaactatgtatttt
aatgaccagccaggtcattcatttgagggctatgcatgttagcctccact
gatgcaagttacccgatctcacggtgaGACTTAATTGTAACTGACAATAA
ATTACAGCTTCATGTATGACTTGAATCATGTGTATcatcttattttttta
aagaccaaTCAATGTCGTCTTCTCAGAATGGCGACAATCCCTTTGAATAT
TTTTGGGTAATGTTACTTTATATAGCAGGACGAG Run BLAST on NCBI transcript from alignment at sc0002141:1978..3361 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039550 ID=TCONS_00039550|Name=TCONS_00039550|organism=Clytia hemisphaerica|type=transcript|length=1384bp|location=Sequence derived from alignment at sc0002141:1978..3361 (Clytia hemisphaerica)
CTCGTCCTGCTATATAAAGTAACATTACCCAAAAATATTCAAAGGGATTG
TCGCCATTCTGAGAAGACGACATTGAttggtctttaaaaaaataagatgA
TACACATGATTCAAGTCATACATGAAGCTGTAATTTATTGTCAGTTACAA
TTAAGTCtcaccgtgagatcgggtaacttgcatcagtggaggctaacatg
catagccctcaaatgaatgacctggctggtcattaaaatacatagttaaa
tctaaacaaaaatggtagtaGAGTAcagctgtgagcggagctgcttagtt
catttgttttgaaattttgctgctttgattggtcagtcatttaatggcta
tgcaagttttcctccactgatgcaagttacccaacttcacggtatATCAA
ATCATACAATTTACAATTACACgtgaagaaaaatttcaatttcaaaacag
gAATTCAGGGTCAATTTGGAATAAGTTGCAACAAACAATTTAagtgaact
tttcttaaaaaaacaacaactttaAATCAAGAAATAATGGAAAcattttt
cagtccaaattatAATAAGCCAtagtagaaaaaataataatacccTCAAT
TTCAAAGCCATTTTCAGCCACTTGAAATAATTTGAACTTTTAATTaactt
aatttctttttagtaagataaaaaaaaacagctagACAGCTAGAATTATA
TATTCAACAGTATTCATTTGAAGATACCAGATGGCAACAACTTAAAACCT
AGTGACTGTAAAGAACAAGGAATGCACATATATGAATTTCTGCCCCTTTT
GTTGTGGAACCATAATGAGTGTTTCTATCTATCAGCAAACAAATATAGTA
CCAAAAGCCTGAtgatgattttcatttttattgtgcATATTATCggtgtt
ttttttctcgagGAATGTTGGTCAAGCAGTTCATAACTGTGTATTTTACT
AGGATCATCCACCACACTAACATGGTAACCAAACTCAATTTTGTCGTTGT
CTATATATACAGGTGGAAAATGGAGTTGCACGTTAAATTCAGTTTATTGC
CAATTACGTTTTATTTGAAATCCAACatgataatttttcttcttgtATGA
CAATGGTTAAATCCAGGTGAGAAGTTGATCATAAGCTCACAACTAGTAGA
CAAGCATTATTTTCACACTATGCGCCACCACCACAGACTTCGTATGTTTC
ATCTCAACACTCTACGTTCATAAAAAATAACACTTGTTCCAGCTCGTATT
TTGTGTGTATGGACACGTGTAAACAGGAAGGACACCTCTGTGTGCTGTGA
GGATGAAGAACCTGAAAATGAAGACAAAATTTTATGAGTGAAAGTGTACT
ATTAGCAGAAGCTGTGATATTATAGATGGAATGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039550-exon-sc0002141-1491911889:1978..3361 | TCONS_00039550-exon-sc0002141-1491911889:1978..3361 | Clytia hemisphaerica | exon |
| TCONS_00039550-exon-sc0002141-1510915933:1978..3361 | TCONS_00039550-exon-sc0002141-1510915933:1978..3361 | Clytia hemisphaerica | exon |
| TCONS_00039550-exon-sc0002141-1575043694:1978..3361 | TCONS_00039550-exon-sc0002141-1575043694:1978..3361 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002141 | supercontig | sc0002141:1978..3361 . |
Blast
The following BLAST results are available for this feature:
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