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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039542 ID=TCONS_00039542|Name=TCONS_00039542|organism=Clytia hemisphaerica|type=transcript|length=1003bp
caaaaataaaacaaagacaaaaaaagacacacaagataaaaaaaagacaa
aaaaagaatcaaaagaaaagaataaaacaaagacaaaaaaagacacaaaa
gaaaaaaaaaagacaaaaggacAATCATTTTTTAGTTTATTTAGTTTTTA
TTGATGGGTGTTGTGACAAAAGGTACACAAAGGACATTGAGACGGTACTT
TGGCTGGATGATCATTGAATTGTTTGAATATTCTGTTGATTTCCTGATAA
ATTCGACTCGCCCCTGCACGTCAAGAGGGGGATATATTGAGCGCTTACCA
ATCGTTTTTCTAAACGGACAAAACGTCACAGAAAAGTAttctttatcaaa
ataaaactgAATACTGTTTTACTGTAAACGAAACATGTGATAATATCGAG
AGAAAAGTAACAAGTTAACAATACTCCTAGAAAACATTATTGATGCATGC
TTCTAATACACGCTGCTGGTCGTTTTAAACCTGGATAACATGACCTGATA
TAAAGAAGGTTTGACAGAAAATATCAATAATACGTCAATTTGATCAATCT
AATCGTTACGTTAAACTGAAAACGAAAATGAACAGAAATGTTTGGTTCGT
CCTTTGTTATTTACTGTATCACACTTTTGGATGATGTTTTTGGTGATCAC
GAACTACATCGCTGAAATATCGATAACTTACTTCTTTCCGCTCTTCACAT
AATTATTATGAACTGATAGAATATTCCTCCACATACTGGTGATTGGTGGT
TGGGGTTTGGATGTTGCAAATGTTCTTGATGGTTGGGTATTGCAAATGTT
CTTTATGGTTGGGGTTATGTTTGCTGGTCACTGGTTGAACTATTACAAAC
CTAAAGACACTTCACCTGTCACACAATATCATGTATTTAAGTTTAGTATA
TGAAGAAGCAATATATTACAAAGATTTTCAAGGGCTGAGAGCGGTCGATT
TTGCATCTTGGAATAGGTAGCattagaaaagttttttttttctttgacca
AAC Run BLAST on NCBI transcript from alignment at sc0002138:24767..25769 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039542 ID=TCONS_00039542|Name=TCONS_00039542|organism=Clytia hemisphaerica|type=transcript|length=1003bp|location=Sequence derived from alignment at sc0002138:24767..25769 (Clytia hemisphaerica)
GTTtggtcaaagaaaaaaaaaacttttctaatGCTACCTATTCCAAGATG
CAAAATCGACCGCTCTCAGCCCTTGAAAATCTTTGTAATATATTGCTTCT
TCATATACTAAACTTAAATACATGATATTGTGTGACAGGTGAAGTGTCTT
TAGGTTTGTAATAGTTCAACCAGTGACCAGCAAACATAACCCCAACCATA
AAGAACATTTGCAATACCCAACCATCAAGAACATTTGCAACATCCAAACC
CCAACCACCAATCACCAGTATGTGGAGGAATATTCTATCAGTTCATAATA
ATTATGTGAAGAGCGGAAAGAAGTAAGTTATCGATATTTCAGCGATGTAG
TTCGTGATCACCAAAAACATCATCCAAAAGTGTGATACAGTAAATAACAA
AGGACGAACCAAACATTTCTGTTCATTTTCGTTTTCAGTTTAACGTAACG
ATTAGATTGATCAAATTGACGTATTATTGATATTTTCTGTCAAACCTTCT
TTATATCAGGTCATGTTATCCAGGTTTAAAACGACCAGCAGCGTGTATTA
GAAGCATGCATCAATAATGTTTTCTAGGAGTATTGTTAACTTGTTACTTT
TCTCTCGATATTATCACATGTTTCGTTTACAGTAAAACAGTATTcagttt
tattttgataaagaaTACTTTTCTGTGACGTTTTGTCCGTTTAGAAAAAC
GATTGGTAAGCGCTCAATATATCCCCCTCTTGACGTGCAGGGGCGAGTCG
AATTTATCAGGAAATCAACAGAATATTCAAACAATTCAATGATCATCCAG
CCAAAGTACCGTCTCAATGTCCTTTGTGTACCTTTTGTCACAACACCCAT
CAATAAAAACTAAATAAACTAAAAAATGATTgtccttttgtctttttttt
ttcttttgtgtctttttttgtctttgttttattcttttcttttgattctt
tttttgtcttttttttatcttgtgtgtctttttttgtctttgttttattt
ttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039542-exon-sc0002138-1491911889:24767..25769 | TCONS_00039542-exon-sc0002138-1491911889:24767..25769 | Clytia hemisphaerica | exon |
| TCONS_00039542-exon-sc0002138-1510915933:24767..25769 | TCONS_00039542-exon-sc0002138-1510915933:24767..25769 | Clytia hemisphaerica | exon |
| TCONS_00039542-exon-sc0002138-1575043694:24767..25769 | TCONS_00039542-exon-sc0002138-1575043694:24767..25769 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002138 | supercontig | sc0002138:24767..25769 . |
Blast
The following BLAST results are available for this feature:
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