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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039537 ID=TCONS_00039537|Name=TCONS_00039537|organism=Clytia hemisphaerica|type=transcript|length=611bp
CAGACACCGAGACCACACACAGCGTACACTGGAAAGCTGATTTTGGATTA
ATCAAAAATGGGAATCCTGGAAAAGATTCAAGATCTGTCTCCTACTGCTG
GGAAAAAGTTCACAGATTATGGATTTGCAAACGATTCTATGACTTTGAGG
AACTTGTATTTGACAGTTTAAGTGAGTTCTTTCCcgaaaaaacaatgcaa
aatattaaactcaaatcaaaggTGTGGACCATCATTAGGGGAGGAGAAGT
TAAGGTAAGTGAAAGTGGTTTCTTATTCTTGGGGAGAAAAATGGATGACT
ACTATActtaaatcaaattaattttcacaagataaaattttgtgacttgg
caaatttttgccattttcaagAAATTAAATCTTGCTAAAACATTTAGGAT
CACTCATTCATAAAATTAAATCCACATGAAATTTTTCCAACCCACTAGGC
GAAAAAACCAGTCCAAATCCTAcacttttcccaaaaaaaattacaatttc
agGCTTGCTCGCAAAATTAAATatataaagatttttccaaCATATAGATA
CAATGAAAATTTCGTGAATTTTTATGGTTGCATATTTTAatctcgcaaaa
tttaatctgat Run BLAST on NCBI transcript from alignment at sc0002137:17982..19068- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039537 ID=TCONS_00039537|Name=TCONS_00039537|organism=Clytia hemisphaerica|type=transcript|length=1087bp|location=Sequence derived from alignment at sc0002137:17982..19068- (Clytia hemisphaerica)
CAGACACCGAGACCACACACAGCGTACACTGGAAAGCTGATTTTGGATTA
ATCAAAAATGGGAATCCTGGAAAAGATTCAAGATCTGTCTCCTACTGCTG
GGAAAAAGTTCACAGGTAACTTAAATATTTTTAAAGGAAGCTTTTTTTTG
AAATATTTCATCAAATCAAGCAAAGAATGTCCTTATATCTTTAACTTTTT
CTGCCACAACAAAAGTATGATGGCCATAGCCGCTGGATCCACTGAGTTGG
ATGATCTCTTCAAGCAGGCATGCTAGCTGAGTGGCATTTTTGAATGCAGT
ATCCATTTTAAGTTCAAATAACGTCTATTGACGTTTGTGGGTGGGTGGGT
TAACAGCCAGTGACGTTAGTGACGTTATTTCAACTTTTGCTAAACATCGA
TTTTCAGTAAAATCTTTACCCTTTCAAAACGTCAATTGACGTTATTTGAA
CTTAAAATCGATTTGTGAGAAGTGACCCCTTAGTCGGAGGACAATTTTTT
GGGAGAATAATATCTTTGTTGGTTATTTTGTTTTGCTGTTAAGATTTTAT
TTAAACAAAAAACTGAAAGTTCTTCCCTTGTTCATTTTAAGATTATGGAT
TTGCAAACGATTCTATGACTTTGAGGAACTTGTATTTGACAGTTTAAGTG
AGTTCTTTCCCGAAAAAACAATGCAAAATATTAAACTCAAATCAAAGGTG
TGGACCATCATTAGGGGAGGAGAAGTTAAGGTAAGTGAAAGTGGTTTCTT
ATTCTTGGGGAGAAAAATGGATGACTACTATACTTAAATCAAATTAATTT
TCACAAGATAAAATTTTGTGACTTGGCAAATTTTTGCCATTTTCAAGAAA
TTAAATCTTGCTAAAACATTTAGGATCACTCATTCATAAAATTAAATCCA
CATGAAATTTTTCCAACCCACTAGGCGAAAAAACCAGTCCAAATCCTACA
CTTTTCCCAAAAAAAATTACAATTTCAGGCTTGCTCGCAAAATTAAATAT
ATAAAGATTTTTCCAACATATAGATACAATGAAAATTTCGTGAATTTTTA
TGGTTGCATATTTTAATCTCGCAAAATTTAATCTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039537-exon-sc0002137-1575043694:18954..19068 | TCONS_00039537-exon-sc0002137-1575043694:18954..19068 | Clytia hemisphaerica | exon |
| TCONS_00039537-exon-sc0002137-1575043694:17982..18477 | TCONS_00039537-exon-sc0002137-1575043694:17982..18477 | Clytia hemisphaerica | exon |
| TCONS_00039537-exon-sc0002137-1510915933:18954..19068 | TCONS_00039537-exon-sc0002137-1510915933:18954..19068 | Clytia hemisphaerica | exon |
| TCONS_00039537-exon-sc0002137-1510915933:17982..18477 | TCONS_00039537-exon-sc0002137-1510915933:17982..18477 | Clytia hemisphaerica | exon |
| TCONS_00039537-exon-sc0002137-1491911889:18954..19068 | TCONS_00039537-exon-sc0002137-1491911889:18954..19068 | Clytia hemisphaerica | exon |
| TCONS_00039537-exon-sc0002137-1491911889:17982..18477 | TCONS_00039537-exon-sc0002137-1491911889:17982..18477 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002137 | supercontig | sc0002137:17982..19068 - |
Blast
The following BLAST results are available for this feature:
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