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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039534 ID=TCONS_00039534|Name=TCONS_00039534|organism=Clytia hemisphaerica|type=transcript|length=1041bp
GACCTAATTGCTGGGgttttggaaatttcactttttaaaaaacctCAAGT
AGGGTAAatgtaggctaaaatcaggctatttaaagcaaaataaagGACTT
TCCGAAATTTGATAAGCAGGAGAGGGTCCAGAGggttgaaaaatagaaaa
aataacacTTGGGAGCGGGATGAGCGTTTAATTGGTATGCGATTAGACAG
AAAGGTCTGTCATGACTAGATAGCCAGGACTATCTACCAAGCATTCATGA
TAAAATTAACATCATTGATTTCAGATCagattgaaaaatcataaaaaaga
taACTGTCAATATGGATTTTAGTTTGATGCCTATTGAATTAATGAAGATG
ATTGTCTCCTATTTGGACAATAAAAGCTGCAGAAATATTGCTCTAACATC
AAATGGAATGAGAAACCTTGTCTTTGAAAAGATCTGGTCGAAACCAAGCT
TTCATAAACAAAAAGATATTGATTTCCTTGGTAATATTTCACATCTGCCG
ATTCGCGAGTTGAATGTTGgagatttttcttgttcatgGGTTGAAATTGT
TGGAATGATACCTAGCCTTCAATTGTTACATGTCAATGCTTCTTCAAACA
AGCCTTGCGAACCGTTTGACACACAATTGCGTCATTTGAGGGTTCCTATT
GTTATTCACACCAGTGCCTTTAATCTTGGAggagaaaattttgatcatCT
TTTGTCAATCCTTGAAGCTATTACAGTAAAAGAAATCATCATCGACCATT
CTTCGTGGCCGCACGATGGTTCGCGATGGTCCTATGAGCGCTTCAAGCTA
CTTGCTGATAACTTTTATATATCTTGTGTTTNTTTTTTTAGACTAAGATT
TAAGATACCTTCGCCAATCTTGGGAATCTCCATTTTTCGATAAGTTATTC
GCGCTTTTCGTGACGATCTCTCTCATGTAAATTTTATGACCACCAGGATT
GGCGAAGTTTGTGAAGTTGAAGCACTCGAAGAATTGGCTTTTTCAATCAT
CTGCGGTGGAGCTCAAGTTATCTGAAATTGGAATCGTCTAA Run BLAST on NCBI transcript from alignment at sc0002137:12558..13598- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039534 ID=TCONS_00039534|Name=TCONS_00039534|organism=Clytia hemisphaerica|type=transcript|length=1041bp|location=Sequence derived from alignment at sc0002137:12558..13598- (Clytia hemisphaerica)
GACCTAATTGCTGGGGTTTTGGAAATTTCACTTTTTAAAAAACCTCAAGT
AGGGTAAATGTAGGCTAAAATCAGGCTATTTAAAGCAAAATAAAGGACTT
TCCGAAATTTGATAAGCAGGAGAGGGTCCAGAGGGTTGAAAAATAGAAAA
AATAACACTTGGGAGCGGGATGAGCGTTTAATTGGTATGCGATTAGACAG
AAAGGTCTGTCATGACTAGATAGCCAGGACTATCTACCAAGCATTCATGA
TAAAATTAACATCATTGATTTCAGATCAGATTGAAAAATCATAAAAAAGA
TAACTGTCAATATGGATTTTAGTTTGATGCCTATTGAATTAATGAAGATG
ATTGTCTCCTATTTGGACAATAAAAGCTGCAGAAATATTGCTCTAACATC
AAATGGAATGAGAAACCTTGTCTTTGAAAAGATCTGGTCGAAACCAAGCT
TTCATAAACAAAAAGATATTGATTTCCTTGGTAATATTTCACATCTGCCG
ATTCGCGAGTTGAATGTTGGAGATTTTTCTTGTTCATGGGTTGAAATTGT
TGGAATGATACCTAGCCTTCAATTGTTACATGTCAATGCTTCTTCAAACA
AGCCTTGCGAACCGTTTGACACACAATTGCGTCATTTGAGGGTTCCTATT
GTTATTCACACCAGTGCCTTTAATCTTGGAGGAGAAAATTTTGATCATCT
TTTGTCAATCCTTGAAGCTATTACAGTAAAAGAAATCATCATCGACCATT
CTTCGTGGCCGCACGATGGTTCGCGATGGTCCTATGAGCGCTTCAAGCTA
CTTGCTGATAACTTTTATATATCTTGTGTTTNTTTTTTTAGACTAAGATT
TAAGATACCTTCGCCAATCTTGGGAATCTCCATTTTTCGATAAGTTATTC
GCGCTTTTCGTGACGATCTCTCTCATGTAAATTTTATGACCACCAGGATT
GGCGAAGTTTGTGAAGTTGAAGCACTCGAAGAATTGGCTTTTTCAATCAT
CTGCGGTGGAGCTCAAGTTATCTGAAATTGGAATCGTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039534-exon-sc0002137-1575043694:12558..13598 | TCONS_00039534-exon-sc0002137-1575043694:12558..13598 | Clytia hemisphaerica | exon |
| TCONS_00039534-exon-sc0002137-1510915933:12558..13598 | TCONS_00039534-exon-sc0002137-1510915933:12558..13598 | Clytia hemisphaerica | exon |
| TCONS_00039534-exon-sc0002137-1491911889:12558..13598 | TCONS_00039534-exon-sc0002137-1491911889:12558..13598 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002137 | supercontig | sc0002137:12558..13598 - |
Blast
The following BLAST results are available for this feature:
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