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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039520 ID=TCONS_00039520|Name=TCONS_00039520|organism=Clytia hemisphaerica|type=transcript|length=950bp
tcccgcaaaaatttgttccgcgaaaatttcttctcgcgaaaatttcttcc
cttaagttaTTTTAAGGTAAGACAAAAGCAGGTGCCTTGAAGGAGTTACA
TGAATATGAATTCGATGACTACAAAATTGCTAGCCAAGTTAACCTAGATA
CAGATCCCTTGATCTGCGTGGCATTGTCATATTTGTCCATATCTCCATTA
AACACTTGGTAATCAATGTCAAGCCTCCAGTGACTTTCAATGAAGTTTGC
ATGATTGAAATACAACTATCAGGAAAAGATTTGCTCGCTGTTACATGCAT
TTATCGAAGCCCAACTAGATCTACGTCCTCCAACGAAAACAACATAAACT
TATTGAtcaaaaaactgatggaaaacagggaatttccccacaatctgcat
taatttatgcaaattaaacacctttttgaccacaaataggcccataactt
ttgatctagagaagttgggactttggtgtaatacacttttttgctcagtt
tNAATTATTTTGTATGTGCTAATAAAAATTACTGTACCCTCTCAAAATTT
GACTTTCAATGAAATCTCACATGACAAATTACTgtagtttcaattttttc
aaaggtTTCATTGAAGACCAACGGAACGacaataataatattttttcttg
atgATATATAAAGTTATAAACTGATGCTTTTTGGTTCCATAATACAGTCT
GACAGTCGCAAATTTTGCTATCTTCAAGCCTAATTTGTGGTTAAAGTATT
TTTCGACCGTTTTTTAGAAGGGGATAGTTATCAAAATGTCCGTCCGACGA
TGGAGGTATGAATAAAAACAGGAGATATGTTGTGTTATTATAACTGCTCT
CGCCCTACTATTAAAAAAGTTTGAATGCTCATTTTTGATGAACACTTTTG
TCtattggtgaaatcttattggctcatttcaGTGTTAATAATTAGAtaag Run BLAST on NCBI transcript from alignment at sc0002133:24671..25620 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039520 ID=TCONS_00039520|Name=TCONS_00039520|organism=Clytia hemisphaerica|type=transcript|length=950bp|location=Sequence derived from alignment at sc0002133:24671..25620 (Clytia hemisphaerica)
cttaTCTAATTATTAACACtgaaatgagccaataagatttcaccaataGA
CAAAAGTGTTCATCAAAAATGAGCATTCAAACTTTTTTAATAGTAGGGCG
AGAGCAGTTATAATAACACAACATATCTCCTGTTTTTATTCATACCTCCA
TCGTCGGACGGACATTTTGATAACTATCCCCTTCTAAAAAACGGTCGAAA
AATACTTTAACCACAAATTAGGCTTGAAGATAGCAAAATTTGCGACTGTC
AGACTGTATTATGGAACCAAAAAGCATCAGTTTATAACTTTATATATcat
caagaaaaaatattattattgtCGTTCCGTTGGTCTTCAATGAAaccttt
gaaaaaattgaaactacAGTAATTTGTCATGTGAGATTTCATTGAAAGTC
AAATTTTGAGAGGGTACAGTAATTTTTATTAGCACATACAAAATAATTNa
aactgagcaaaaaagtgtattacaccaaagtcccaacttctctagatcaa
aagttatgggcctatttgtggtcaaaaaggtgtttaatttgcataaatta
atgcagattgtggggaaattccctgttttccatcagttttttgaTCAATA
AGTTTATGTTGTTTTCGTTGGAGGACGTAGATCTAGTTGGGCTTCGATAA
ATGCATGTAACAGCGAGCAAATCTTTTCCTGATAGTTGTATTTCAATCAT
GCAAACTTCATTGAAAGTCACTGGAGGCTTGACATTGATTACCAAGTGTT
TAATGGAGATATGGACAAATATGACAATGCCACGCAGATCAAGGGATCTG
TATCTAGGTTAACTTGGCTAGCAATTTTGTAGTCATCGAATTCATATTCA
TGTAACTCCTTCAAGGCACCTGCTTTTGTCTTACCTTAAAAtaacttaag
ggaagaaattttcgcgagaagaaattttcgcggaacaaatttttgcggga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039520-exon-sc0002133-1491911889:24671..25620 | TCONS_00039520-exon-sc0002133-1491911889:24671..25620 | Clytia hemisphaerica | exon |
| TCONS_00039520-exon-sc0002133-1510915933:24671..25620 | TCONS_00039520-exon-sc0002133-1510915933:24671..25620 | Clytia hemisphaerica | exon |
| TCONS_00039520-exon-sc0002133-1575043694:24671..25620 | TCONS_00039520-exon-sc0002133-1575043694:24671..25620 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002133 | supercontig | sc0002133:24671..25620 . |
Blast
The following BLAST results are available for this feature:
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