TCONS_00039518 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039518
Unique NameTCONS_00039518
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length148

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039518 ID=TCONS_00039518|Name=TCONS_00039518|organism=Clytia hemisphaerica|type=transcript|length=148bp
CACTGAGTCACCATATAATTTAAGAGCTGGCGCTTTGACTTGGAATTTCA
GGTGTTATTAATTTAATATTCTTTCCATGTGCATTCAATTTTATCCCAAT
TCTTGTTTCGATTGGTCCCAGGAACACAAAATCAGGGCGGAGGTTGAA
Run BLAST on NCBI

transcript from alignment at sc0002133:5951..6098

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039518 ID=TCONS_00039518|Name=TCONS_00039518|organism=Clytia hemisphaerica|type=transcript|length=148bp|location=Sequence derived from alignment at sc0002133:5951..6098 (Clytia hemisphaerica)
TTCAACCTCCGCCCTGATTTTGTGTTCCTGGGACCAATCGAAACAAGAAT
TGGGATAAAATTGAATGCACATGGAAAGAATATTAAATTAATAACACCTG
AAATTCCAAGTCAAAGCGCCAGCTCTTAAATTATATGGTGACTCAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023868XLOC_023868Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039518-exon-sc0002133-1491911889:5951..6098TCONS_00039518-exon-sc0002133-1491911889:5951..6098Clytia hemisphaericaexon
TCONS_00039518-exon-sc0002133-1510915933:5951..6098TCONS_00039518-exon-sc0002133-1510915933:5951..6098Clytia hemisphaericaexon
TCONS_00039518-exon-sc0002133-1575043694:5951..6098TCONS_00039518-exon-sc0002133-1575043694:5951..6098Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002133supercontigsc0002133:5951..6098 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039518 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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