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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039497 ID=TCONS_00039497|Name=TCONS_00039497|organism=Clytia hemisphaerica|type=transcript|length=1050bp
ATTTGAACCCTGTCCattaaaaagtacaaaatcaaaaataaactcCCAAT
CCCTTTTCAAACTTGACATCATTGAGTAAAGTTGTAAGTACCAACCCATC
CTCTACTTCTAGACATGCTATTTTTCGTTTCATGCTAATTGTATTGACTC
TTTTAAGCTCTCCTTTAATATCCTTGACAAAAGATAAATTCCGACCAAGC
TTGAGTGGCAGGGACGATCAAAGAAATCAAGTAAGTTTTCTTCTTTGTAT
ACCAAACACATAAAAATTGATTCGGACATGATGTCCTGTACGCATGCAAT
ACAACCATTATTCAACAAGAACCAACaatctttttgactttttgatattt
ttgttagGATAGATTTGTACGATGACTTAATACCTGCACTTTCCAGTTCA
GTGATCCTTTTCACGACAGATACTAAAGGGTTTGTTGCATTGCGCACAAG
CTTCTTCAGGATCTGTAGGTGATTTTCAAAGGGGAAACAGGATATGAGAT
CTAAATTGACATTAAAGTTGTgtagaaaaatcagtcaattttcatattat
ataattcacacaaaaaatttattcaggttattttcatttcattaaattta
tcatatttgttCAATGCAGGTCATTTtgtcaatgtttacattttatactC
AATGTAGGTCATTTTGgtaatgtttattttcaatgtaGGTCTGTATTTTA
TACATTGTTTACATTTCTACCATTTTGATGAGTCATCACTTTTTGGTGTC
CAGTCCACATGAGGCTAGACTAGGGCTTGCATGCTTCTTCATGTCATTCA
CAATCAAGCTCACAAGGAGTANNTGAACATACGTCAACAACGTTACAAAT
ACCTGTCGTCTGAATCATTGACCCCCTCAACCGCCCTTGGGTAGTCTCAG
TCATCATTTCGACCCTCATATAACAACAAGTTGCGAGAGTCATCTGCTAA
ATTTTCCGGCATTTTCCCTGGAtagttttgaagattttgggATATTTGTC
GAATCTGTCCTTGAGACAGTCAACAAAGGCGTGGTCCTTCTTTCAAGAAC Run BLAST on NCBI transcript from alignment at sc0002128:7317..8366 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039497 ID=TCONS_00039497|Name=TCONS_00039497|organism=Clytia hemisphaerica|type=transcript|length=1050bp|location=Sequence derived from alignment at sc0002128:7317..8366 (Clytia hemisphaerica)
GTTCTTGAAAGAAGGACCACGCCTTTGTTGACTGTCTCAAGGACAGATTC
GACAAATATcccaaaatcttcaaaactaTCCAGGGAAAATGCCGGAAAAT
TTAGCAGATGACTCTCGCAACTTGTTGTTATATGAGGGTCGAAATGATGA
CTGAGACTACCCAAGGGCGGTTGAGGGGGTCAATGATTCAGACGACAGGT
ATTTGTAACGTTGTTGACGTATGTTCANNTACTCCTTGTGAGCTTGATTG
TGAATGACATGAAGAAGCATGCAAGCCCTAGTCTAGCCTCATGTGGACTG
GACACCAAAAAGTGATGACTCATCAAAATGGTAGAAATGTAAACAATGTA
TAAAATACAGACCtacattgaaaataaacattacCAAAATGACCTACATT
GagtataaaatgtaaacattgacaAAATGACCTGCATTGaacaaatatga
taaatttaatgaaatgaaaataacctgaataaattttttgtgtgaattat
ataatatgaaaattgactgatttttctacACAACTTTAATGTCAATTTAG
ATCTCATATCCTGTTTCCCCTTTGAAAATCACCTACAGATCCTGAAGAAG
CTTGTGCGCAATGCAACAAACCCTTTAGTATCTGTCGTGAAAAGGATCAC
TGAACTGGAAAGTGCAGGTATTAAGTCATCGTACAAATCTATCctaacaa
aaatatcaaaaagtcaaaaagattGTTGGTTCTTGTTGAATAATGGTTGT
ATTGCATGCGTACAGGACATCATGTCCGAATCAATTTTTATGTGTTTGGT
ATACAAAGAAGAAAACTTACTTGATTTCTTTGATCGTCCCTGCCACTCAA
GCTTGGTCGGAATTTATCTTTTGTCAAGGATATTAAAGGAGAGCTTAAAA
GAGTCAATACAATTAGCATGAAACGAAAAATAGCATGTCTAGAAGTAGAG
GATGGGTTGGTACTTACAACTTTACTCAATGATGTCAAGTTTGAAAAGGG
ATTGGgagtttatttttgattttgtactttttaatGGACAGGGTTCAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039497-exon-sc0002128-1491911889:7317..8366 | TCONS_00039497-exon-sc0002128-1491911889:7317..8366 | Clytia hemisphaerica | exon |
| TCONS_00039497-exon-sc0002128-1510915933:7317..8366 | TCONS_00039497-exon-sc0002128-1510915933:7317..8366 | Clytia hemisphaerica | exon |
| TCONS_00039497-exon-sc0002128-1575043694:7317..8366 | TCONS_00039497-exon-sc0002128-1575043694:7317..8366 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002128 | supercontig | sc0002128:7317..8366 . |
Blast
The following BLAST results are available for this feature:
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