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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039489 ID=TCONS_00039489|Name=TCONS_00039489|organism=Clytia hemisphaerica|type=transcript|length=984bp
AAACTTTGGACAATGGTTGACCAGCTTCTTAAAATTAATCCGGGATAATC
GAAAGCTTTCATCACCCTCAACACCAGAAATAATGGAAAACATTACAGGT
AACATGATGGCAAGCATGGCACAAACCAAAATCTACCTTCCTCGTGTTTC
AGGAAATGACACTATTAACGTTAAGACGATCCTGCTAACTGAACCTCAAA
TCTCCTGCATCGAAAGCCAGTCGAACTGGAAGCTGATCCAAGCTTCCTAT
GGTGCTGGTAAATCAATCATTTTACACGAAATTGCAAGGAAACTGCTGAA
AATGAGCAACCAAGACTTGATTATAAACGTTACTTTCGACCCTTTTAGTG
CCCTCGATCAAAAAGTCGACCATTCATTTAACGAGCTTTGTGAACAAGAG
AGATTGACAAGAAAACGAGAAAATCTCATCTCGTTATCGCTTTCTGAAGC
tgttggagaaaaaaaaaatgtcaccGATTTTTATAACTGTTCCTCATTAC
CATCCAAAAACATTGCTGACGTCATGCTGCTCTTAAAAAACAAATACAAA
CCTCGAAGAGTTCATTTCCTTTTCGATGAAGTGCCGCAAGAGCTGTTCAC
GGAGACCTACTCAGAAACACTACGTGGCCGTTTGGAAAGTGAACTTCGAG
AATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGAAAGATA
ACCGAGGAAGGCAAGGTCACCAATTCACAAGAGATAGATTTAAACAGCTC
AAGTATGAAACTTTTCAAACTACCAACGACAATTAGGATGAGCAGTTCCC
TGAAcgaattgaaagaaattttggaagNCTCAGGCATGGAACTTTTCAAA
CTACCAACCACAATGAGGATGAGCAGTTGCTTACataaattgaaagaagt
ttTGGAAGGTGAAATCGAACGTTCGCCCTGCTCCTTAAACTTAGAAATTC
GATTGAAAGgaaaCGTTTTGCTAACAAAAGACGA Run BLAST on NCBI transcript from alignment at sc0002124:28787..29896- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039489 ID=TCONS_00039489|Name=TCONS_00039489|organism=Clytia hemisphaerica|type=transcript|length=1110bp|location=Sequence derived from alignment at sc0002124:28787..29896- (Clytia hemisphaerica)
AAACTTTGGACAATGGTTGACCAGCTTCTTAAAATTAATCCGGGATAATC
GAAAGCTTTCATCACCCTCAACACCAGAAATAATGGAAAACATTACAGGT
AACATGATGGCAAGCATGGCACAAACCAAAATCTACCTTCCTCGTGTTTC
AGGAAATGACACTATTAACGTTAAGACGATCCTGCTAACTGAACCTCAAA
TCTCCTGCATCGAAAGCCAGTCGAACTGGAAGCTGATCCAAGCTTCCTAT
GGTGCTGGTAAATCAATCATTTTACACGAAATTGCAAGGAAACTGCTGAA
AATGAGCAACCAAGACTTGATTATAAACGTTACTTTCGACCCTTTTAGTG
CCCTCGATCAAAAAGTCGACCATTCATTTAACGAGCTTTGTGAACAAGAG
AGATTGACAAGAAAACGAGAAAATCTCATCTCGTTATCGCTTTCTGAAGC
TGTTGGAGAAAAAAAAAATGTCACCGATTTTTATAACTGTTCCTCATTAC
CATCCAAAAACATTGCTGACGTCATGCTGCTCTTAAAAAACAAATACAAA
CCTCGAAGAGTTCATTTCCTTTTCGATGAAGTGCCGCAAGAGCTGTTCAC
GGAGACCTACTCAGAAACACTACGTGGCCGTTTGGAAAGTGAACTTCGAG
AATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGAAAGATA
ACCGAGGAAGGCAAGGTCACCAATTCACAAGAGATAGATTTAAACAGCTC
AAGTATGAAACTTTTCAAACTACCAACGACAATTAGGATGAGCAGTTCCC
TGAACGAATTGAAAGAAATTTTGGAAGNCTCAGGCATGGAACTTTTCAAA
CTACCAACCACAATGAGGATGAGCAGTTGCTTACATAAATTGAAAGAAGT
TTTGGAAGGTGAAATCGAACGTTCGCCCTGCTCCTTAAACTTAGAAATTC
GATTGAAAGGTATTACATACTATTTACGTAACATTCTTTTATAGAATTGT
TCAATTGCAACAGTGTGCAAGTAAAATATACTCATTTCCATTTATGACCG
AAATATTTTCTTACATTTTAATTTTTATTTTTCAGGAAACGTTTTGCTAA
CAAAAGACGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039489-exon-sc0002124-1575043694:28938..29896 | TCONS_00039489-exon-sc0002124-1575043694:28938..29896 | Clytia hemisphaerica | exon |
| TCONS_00039489-exon-sc0002124-1575043694:28787..28811 | TCONS_00039489-exon-sc0002124-1575043694:28787..28811 | Clytia hemisphaerica | exon |
| TCONS_00039489-exon-sc0002124-1510915933:28938..29896 | TCONS_00039489-exon-sc0002124-1510915933:28938..29896 | Clytia hemisphaerica | exon |
| TCONS_00039489-exon-sc0002124-1510915933:28787..28811 | TCONS_00039489-exon-sc0002124-1510915933:28787..28811 | Clytia hemisphaerica | exon |
| TCONS_00039489-exon-sc0002124-1491911889:28938..29896 | TCONS_00039489-exon-sc0002124-1491911889:28938..29896 | Clytia hemisphaerica | exon |
| TCONS_00039489-exon-sc0002124-1491911889:28787..28811 | TCONS_00039489-exon-sc0002124-1491911889:28787..28811 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002124 | supercontig | sc0002124:28787..29896 - |
Blast
The following BLAST results are available for this feature:
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