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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039393 ID=TCONS_00039393|Name=TCONS_00039393|organism=Clytia hemisphaerica|type=transcript|length=802bp
GTAACAGTAAAATACTAAAAGTTAAAGTAGCTTGTCATCTAGTACTCACC
TTTTCGTTATGTCATACATTCAGTCAGCAAGAGGCAGCAGCAAAAGGGAA
ATTAAAATTCCAGCCAGATCGAGACTTTATCAAATAGATTTGCTTCAAAG
TAAAAGAGGCAAATTAGAGGCGAAAATACGAACACAGCTTTTGAAGTTGG
ACATACTCTTAGAGGATCAGAGACGAGATGAGCTGTTGAATGAAGTTGAT
GCCCTGGAGAGCCTGTTTGCAGAGTTTATGCAGTATCATTCAAAGTGTCA
TATCCTGGTCGCTGAGGCTGACAATAGTGACGAATTCGATAGATACAGCA
CTGAATCGATAGACAGAAAAGTTTCTGTTATCAAGAAAAGGTTCATCGAG
GCGATGGAACAAGAAATAACGGTGGAGGAGCAAGTGAAGAGAGCCAAGAC
TGCTAGCAGACCTGAGGAGATAGCTGAGCAATTTGCAGAGTTACCCTACG
ACAAGGCCAGCAGTCCAGTATCTTCAAGAAGCTCCtcgaaaaaatcatca
aacaaATCCGGAAAGTCATCAAGCTATTCTGGAAAGTCATCAAATAAATC
AAACAAATCAGTTTCGAGTGAGAAGGCCAAAGAGAGAGCAAGATTAGTTG
GGCTGCAAATTGAAGCGAAATTTCTACAGCAAAAACAGAAGATTGAGCAA
GAGAGCAAAGCCTTCCAGCTAAATCTCGAGATGGCAAAGTCGCAAGCAAA
AATAGAAGCTTACGAGAATGTAGAGCAAGAAAATAACAAGCCAGAAACAG
AC Run BLAST on NCBI protein sequence of TCONS_00039393-protein >TCONS_00039393-protein ID=TCONS_00039393-protein|Name=TCONS_00039393-protein|organism=Clytia hemisphaerica|type=polypeptide|length=248bp
MSYIQSARGSSKREIKIPARSRLYQIDLLQSKRGKLEAKIRTQLLKLDIL
LEDQRRDELLNEVDALESLFAEFMQYHSKCHILVAEADNSDEFDRYSTES
IDRKVSVIKKRFIEAMEQEITVEEQVKRAKTASRPEEIAEQFAELPYDKA
SSPVSSRSSSKKSSNKSGKSSSYSGKSSNKSNKSVSSEKAKERARLVGLQ
IEAKFLQQKQKIEQESKAFQLNLEMAKSQAKIEAYENVEQENNKPETD Run BLAST on NCBI transcript from alignment at sc0002093:8489..9290 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039393 ID=TCONS_00039393|Name=TCONS_00039393|organism=Clytia hemisphaerica|type=transcript|length=802bp|location=Sequence derived from alignment at sc0002093:8489..9290 (Clytia hemisphaerica)
GTCTGTTTCTGGCTTGTTATTTTCTTGCTCTACATTCTCGTAAGCTTCTA
TTTTTGCTTGCGACTTTGCCATCTCGAGATTTAGCTGGAAGGCTTTGCTC
TCTTGCTCAATCTTCTGTTTTTGCTGTAGAAATTTCGCTTCAATTTGCAG
CCCAACTAATCTTGCTCTCTCTTTGGCCTTCTCACTCGAAACTGATTTGT
TTGATTTATTTGATGACTTTCCAGAATAGCTTGATGACTTTCCGGATttg
tttgatgattttttcgaGGAGCTTCTTGAAGATACTGGACTGCTGGCCTT
GTCGTAGGGTAACTCTGCAAATTGCTCAGCTATCTCCTCAGGTCTGCTAG
CAGTCTTGGCTCTCTTCACTTGCTCCTCCACCGTTATTTCTTGTTCCATC
GCCTCGATGAACCTTTTCTTGATAACAGAAACTTTTCTGTCTATCGATTC
AGTGCTGTATCTATCGAATTCGTCACTATTGTCAGCCTCAGCGACCAGGA
TATGACACTTTGAATGATACTGCATAAACTCTGCAAACAGGCTCTCCAGG
GCATCAACTTCATTCAACAGCTCATCTCGTCTCTGATCCTCTAAGAGTAT
GTCCAACTTCAAAAGCTGTGTTCGTATTTTCGCCTCTAATTTGCCTCTTT
TACTTTGAAGCAAATCTATTTGATAAAGTCTCGATCTGGCTGGAATTTTA
ATTTCCCTTTTGCTGCTGCCTCTTGCTGACTGAATGTATGACATAACGAA
AAGGTGAGTACTAGATGACAAGCTACTTTAACTTTTAGTATTTTACTGTT
AC Coding sequence (CDS) from alignment at sc0002093:8489..9290 >TCONS_00039393 ID=TCONS_00039393|Name=TCONS_00039393|organism=Clytia hemisphaerica|type=CDS|length=744bp|location=Sequence derived from alignment at sc0002093:8489..9290 (Clytia hemisphaerica)
GTCTGTTTCTGGCTTGTTATTTTCTTGCTCTACATTCTCGTAAGCTTCTA
TTTTTGCTTGCGACTTTGCCATCTCGAGATTTAGCTGGAAGGCTTTGCTC
TCTTGCTCAATCTTCTGTTTTTGCTGTAGAAATTTCGCTTCAATTTGCAG
CCCAACTAATCTTGCTCTCTCTTTGGCCTTCTCACTCGAAACTGATTTGT
TTGATTTATTTGATGACTTTCCAGAATAGCTTGATGACTTTCCGGATttg
tttgatgattttttcgaGGAGCTTCTTGAAGATACTGGACTGCTGGCCTT
GTCGTAGGGTAACTCTGCAAATTGCTCAGCTATCTCCTCAGGTCTGCTAG
CAGTCTTGGCTCTCTTCACTTGCTCCTCCACCGTTATTTCTTGTTCCATC
GCCTCGATGAACCTTTTCTTGATAACAGAAACTTTTCTGTCTATCGATTC
AGTGCTGTATCTATCGAATTCGTCACTATTGTCAGCCTCAGCGACCAGGA
TATGACACTTTGAATGATACTGCATAAACTCTGCAAACAGGCTCTCCAGG
GCATCAACTTCATTCAACAGCTCATCTCGTCTCTGATCCTCTAAGAGTAT
GTCCAACTTCAAAAGCTGTGTTCGTATTTTCGCCTCTAATTTGCCTCTTT
TACTTTGAAGCAAATCTATTTGATAAAGTCTCGATCTGGCTGGAATTTTA
ATTTCCCTTTTGCTGCTGCCTCTTGCTGACTGAATGTATGACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039393-exon-sc0002093-1491911889:8489..9290 | TCONS_00039393-exon-sc0002093-1491911889:8489..9290 | Clytia hemisphaerica | exon |
| TCONS_00039393-exon-sc0002093-1510915933:8489..9290 | TCONS_00039393-exon-sc0002093-1510915933:8489..9290 | Clytia hemisphaerica | exon |
| TCONS_00039393-exon-sc0002093-1575043694:8489..9290 | TCONS_00039393-exon-sc0002093-1575043694:8489..9290 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002093 | supercontig | sc0002093:8489..9290 . |
Blast
The following BLAST results are available for this feature:
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