|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039355 ID=TCONS_00039355|Name=TCONS_00039355|organism=Clytia hemisphaerica|type=transcript|length=886bp
TATCGGCTCGTTATATGTATTGTCTTTGTCTCGCCTTGGTCCCTTGTGAA
TTTGTATTGCATTGTATTTGTCTTTGTTGTCTTTACTTTTTTGAATCTCA
CAAAAATCACACAGGAATCAAGTGAAATGATCATACAAAAATGTATGATA
ACACCAAAGCCACGTTTTCTTAACGCCAAAATTGATACATATCATTGGGT
CCATTTGTTTCAGCACCATTTATGCCACTTATGCCACCTTTTTCccattt
gtttcatcaaaatgtgtttaaaagtgttaaaaacaTTGATCATTTGTGTT
CTTTGTGTGTGGAAGTGGAAGTTTGCCAAACTTTTCCAAGTAAAAAGAAA
TTCGCATTTGTTTCTGCATTCTGGGTCAAAAGTGGAAGAAtgttacctta
aaggaagaaattttggcgggaatttaatttggggGATGGCCAAGAAAgtt
tttttagagggaatttaatttggcggtcgcttaaaaatttaaccttaaga
tggcgtcaaaacagcgaaaaaatagcaaaaacaccttaaaagagatcata
ttttcaaaatgtttaatttggcgggaatttaatttggcggatggcggaaa
aaagaaattttggcgggaacttaatttggaggatttcagccaaatccgcc
aaattttgtTTCCGCCAAAacttcttcctttaaggtattgtAAATGGCGG
CAATAATCGAATGCATAATTACGATGCGTTTTCTTGttagtttgtttata
tttccgACATAATCTATGCGGCCATTATTGACGTAACTAAGAGTTCgcaa
aatggtagatttttacatttttaacacggtttccatttgtttcacacgat
ggtggcatttggggaaaatatgtcaaaaagggAAGT Run BLAST on NCBI transcript from alignment at sc0002082:19838..20723 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039355 ID=TCONS_00039355|Name=TCONS_00039355|organism=Clytia hemisphaerica|type=transcript|length=886bp|location=Sequence derived from alignment at sc0002082:19838..20723 (Clytia hemisphaerica)
ACTTccctttttgacatattttccccaaatgccaccatcgtgtgaaacaa
atggaaaccgtgttaaaaatgtaaaaatctaccattttgcGAACTCTTAG
TTACGTCAATAATGGCCGCATAGATTATGTcggaaatataaacaaactaa
CAAGAAAACGCATCGTAATTATGCATTCGATTATTGCCGCCATTTacaat
accttaaaggaagaagtTTTGGCGGAAacaaaatttggcggatttggctg
aaatcctccaaattaagttcccgccaaaatttcttttttccgccatccgc
caaattaaattcccgccaaattaaacattttgaaaatatgatctctttta
aggtgtttttgctattttttcgctgttttgacgccatcttaaggttaaat
ttttaagcgaccgccaaattaaattccctctaaaaaaacTTTCTTGGCCA
TCccccaaattaaattcccgccaaaatttcttcctttaaggtaacaTTCT
TCCACTTTTGACCCAGAATGCAGAAACAAATGCGAATTTCTTTTTACTTG
GAAAAGTTTGGCAAACTTCCACTTCCACACACAAAGAACACAAATGATCA
AtgtttttaacacttttaaacacattttgatgaaacaaatggGAAAAAGG
TGGCATAAGTGGCATAAATGGTGCTGAAACAAATGGACCCAATGATATGT
ATCAATTTTGGCGTTAAGAAAACGTGGCTTTGGTGTTATCATACATTTTT
GTATGATCATTTCACTTGATTCCTGTGTGATTTTTGTGAGATTCAAAAAA
GTAAAGACAACAAAGACAAATACAATGCAATACAAATTCACAAGGGACCA
AGGCGAGACAAAGACAATACATATAACGAGCCGATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039355-exon-sc0002082-1491911889:19838..20723 | TCONS_00039355-exon-sc0002082-1491911889:19838..20723 | Clytia hemisphaerica | exon |
| TCONS_00039355-exon-sc0002082-1510915933:19838..20723 | TCONS_00039355-exon-sc0002082-1510915933:19838..20723 | Clytia hemisphaerica | exon |
| TCONS_00039355-exon-sc0002082-1575043694:19838..20723 | TCONS_00039355-exon-sc0002082-1575043694:19838..20723 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002082 | supercontig | sc0002082:19838..20723 . |
Blast
The following BLAST results are available for this feature:
|
