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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039351 ID=TCONS_00039351|Name=TCONS_00039351|organism=Clytia hemisphaerica|type=transcript|length=513bp
aggggtttgattaaaaagcaatttataaaggcaattctttgttaaaagtg
ttaaagaatctaaaacataacttttatattcagatactaaaatgtatttt
ctgactatggtcagagcccNTTCTTTGTGAAAGAGGAAGATTTTGTTTAG
TATAAAAGTGGTGATGTGAAAGTACCGTGTTTAAATCATCTCTGGCAAAA
AGTCGAAAGGATTACTATTCGAAGGATTgatcaaaacaaagttaaaagca
aaaaatagtaGCAACGTCCTAAAATAGGATAAGATGAAGGTCATTTTGGC
AAATCTGTTGTTGCTGACTTTGATTTGCTGTACTGTTCTTGGCTATCACC
ATCCTAACagaaaagatgaaaagaaaagagaacttAAAGAAGTTATAAAA
GAAACTGTCAGAGATGTTTTAAAAGGGATGGACAAAGAAGTCGAGGATGA
AGATTTGGATGACTTTGATGAAAATGACGAAGAGTTATCCATTAAAAGAG
ATGCTAAAGCTAA Run BLAST on NCBI transcript from alignment at sc0002081:5189..6445+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039351 ID=TCONS_00039351|Name=TCONS_00039351|organism=Clytia hemisphaerica|type=transcript|length=1257bp|location=Sequence derived from alignment at sc0002081:5189..6445+ (Clytia hemisphaerica)
aggggtttgattaaaaagcaatttataaaggcaattctttgttaaaagtg
ttaaagaatctaaaacataacttttatattcagatactaaaatgtatttt
ctgactatggtcagagcccNTTCTTTGTGAAAGAGGAAGATTTTGTTTAG
TATAAAAGTGGTGATGTGAAAGTACCGTGTTTAAATCATCTCTGGCAAAA
AGTCGAAAGGATTACTATTCGAAGGATTgatcaaaacaaagttaaaagca
aaaaatagtaGCAACGTCCTAAAATAGGATAAGATGAAGGTCATTTTGGC
AAATCTGTTGTTGCTGACTTTGATTTGCTGTACTGTTCTTGGTgaggatt
ttttgtttgttcttttgCCAGTGTTGATCGCACgattttattttcttgaa
aatttgatcaaatttcgaCAGATAATTAAATCTAAAATTTGTCTGGAAAT
CAGTTTCGGATATAGTGATCTCTGCTCTATACACCTATACATCTtgctca
cagacccggtaggattttttcagccagtggggatagaaataacagactga
aactcgatggggatgatattcacatattttttatgaatggggatttcaat
tcttttgttttaaagtcagaaaattcattagggatgggaaaaatttaaaa
tattttgcagcgaggattggtttatttgattattttcagtgcggggacaa
aaattgggggATAATTTTGCACCGGGGACAATATATTTTTCCATTGGGAA
GGGCTCCCTATTTAGCATGGTTTATCTCACAGCCAAACTTAATAAACTAT
ATTTTTTTAGGCTATCACCATCCTAACagaaaagatgaaaagaaaagaga
acttAAAGAAGTTATAAAAGAAACTGTCAGAGATGTTTTAAAAGGTATGG
TAAATTTTCTTGATTGCGGAGTCGAGTTTGCAAGAAGCAAAGAGAAAAAT
GtcaatattgaaaagaaagacttgTTAAAACTTTATACCATAAAATGCCA
ATGAGCTGCAGTCTATTTGCAAGATAGTTTTATGTATATCATTAGTAAGG
TATTTCAACTCTTTCTCTCTTCTTGAGCTACGGCTATTGAAAGTATATGC
GATGATCTTTTCTAGTCTAATGGGATTGACTGTATGAAAGAGAAATAAGT
TTACCACTTAATTATTCAGGGATGGACAAAGAAGTCGAGGATGAAGATTT
GGATGACTTTGATGAAAATGACGAAGAGTTATCCATTAAAAGAGATGCTA
AAGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039351-exon-sc0002081-1491911889:5189..5529 | TCONS_00039351-exon-sc0002081-1491911889:5189..5529 | Clytia hemisphaerica | exon |
| TCONS_00039351-exon-sc0002081-1510915933:5189..5529 | TCONS_00039351-exon-sc0002081-1510915933:5189..5529 | Clytia hemisphaerica | exon |
| TCONS_00039351-exon-sc0002081-1575043694:5189..5529 | TCONS_00039351-exon-sc0002081-1575043694:5189..5529 | Clytia hemisphaerica | exon |
| TCONS_00039351-exon-sc0002081-1491911889:5999..6082 | TCONS_00039351-exon-sc0002081-1491911889:5999..6082 | Clytia hemisphaerica | exon |
| TCONS_00039351-exon-sc0002081-1510915933:5999..6082 | TCONS_00039351-exon-sc0002081-1510915933:5999..6082 | Clytia hemisphaerica | exon |
| TCONS_00039351-exon-sc0002081-1575043694:5999..6082 | TCONS_00039351-exon-sc0002081-1575043694:5999..6082 | Clytia hemisphaerica | exon |
| TCONS_00039351-exon-sc0002081-1491911889:6358..6445 | TCONS_00039351-exon-sc0002081-1491911889:6358..6445 | Clytia hemisphaerica | exon |
| TCONS_00039351-exon-sc0002081-1510915933:6358..6445 | TCONS_00039351-exon-sc0002081-1510915933:6358..6445 | Clytia hemisphaerica | exon |
| TCONS_00039351-exon-sc0002081-1575043694:6358..6445 | TCONS_00039351-exon-sc0002081-1575043694:6358..6445 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002081 | supercontig | sc0002081:5189..6445 + |
Blast
The following BLAST results are available for this feature:
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