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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039350 ID=TCONS_00039350|Name=TCONS_00039350|organism=Clytia hemisphaerica|type=transcript|length=709bp
GTGACCGAGTTGGTCAAATCTCAAAGTGTTCCTGATGATATCGAGTTGTG
CTTCAACGATGACCTCGGTAGACAACAAACGTTGACGGACAAACGATTGA
ACAAATTCTTTGATAAAGATGTCTCCAAACCCAAGAAGCTCTTATGTTTT
CCTGACTCTTAAGAAATGGAAAAGCATCTAAAAAATGTAATGTTTGGGGA
AATCTGGTAATAATTTGGACCTAAAGGCTGACAAAATAAAGTTACTGTCC
TGTAAAGTGTTTTCTTCATCGAGTTTGtaattttgtaaatatcttcttaa
gttgcttatatcttcttaaTACAAATATATAAAATTAAGAAAACGTCAGG
TCGAAAATTTCGTTTTAGATGACAGTTTAAACCACTTTTTTACAACCatg
aataaattttttcaatctttgataTCAGTGCTAGAACAGTCTTGTGTATA
GTACTTAGAGCGTCGCAGATACTAACGAGTTTATTTTACACTTTTGAGGA
TTGCAAATTGATTGGAGCGATTTGGATTTTTGACCCGCCAAATTAAAATG
CTTGTTTATCGTCGTCTCAACCGTCTCCGTTGCAGAAAAAAACACGCACA
CATGAACGCATGGTAATNttgcaattaaattcttaattactcttaaggga
ttcgattaaaaagcaatttataaaggcaattctttgttaaaagtgttaag
gaacctgaa Run BLAST on NCBI transcript from alignment at sc0002081:1883..2909+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039350 ID=TCONS_00039350|Name=TCONS_00039350|organism=Clytia hemisphaerica|type=transcript|length=1027bp|location=Sequence derived from alignment at sc0002081:1883..2909+ (Clytia hemisphaerica)
GTGACCGAGTTGGTCAAATCTCAAAGTGTTCCTGATGATATCGAGTTGTG
GTAAGATGGTTATTAATAACAATTATACTTAAAGGGTCATAATAAACTAT
TTTCTACACTGACTGTACAACGAGAAACAAAcaaccgttggaaagatatt
ctcaAAATGATGACTAATTTtcattattaaaattttttgacaaatttcaa
aaattaagaataactCTGAGTAATAcatgaaatttatagaaaattgAGCG
TTTGATTAAGGTTGTACAGCCTCTATATAAGAAGTGCTCTGAAAAAATTA
TTCTTCTAGGGCCCATCTATCAAATttgttaataataataattattattt
tctcCTTCTTCTCTGAAGCTTCAACGATGACCTCGGTAGACAACAAACGT
TGACGGACAAACGATTGAACAAATTCTTTGATAAAGATGTCTCCAAACCC
AAGAAGCTCTTATGTTTTCCTGACTCTTAAGAAATGGAAAAGCATCTAAA
AAATGTAATGTTTGGGGAAATCTGGTAATAATTTGGACCTAAAGGCTGAC
AAAATAAAGTTACTGTCCTGTAAAGTGTTTTCTTCATCGAGTTTGtaatt
ttgtaaatatcttcttaagttgcttatatcttcttaaTACAAATATATAA
AATTAAGAAAACGTCAGGTCGAAAATTTCGTTTTAGATGACAGTTTAAAC
CACTTTTTTACAACCatgaataaattttttcaatctttgataTCAGTGCT
AGAACAGTCTTGTGTATAGTACTTAGAGCGTCGCAGATACTAACGAGTTT
ATTTTACACTTTTGAGGATTGCAAATTGATTGGAGCGATTTGGATTTTTG
ACCCGCCAAATTAAAATGCTTGTTTATCGTCGTCTCAACCGTCTCCGTTG
CAGAAAAAAACACGCACACATGAACGCATGGTAATNttgcaattaaattc
ttaattactcttaagggattcgattaaaaagcaatttataaaggcaattc
tttgttaaaagtgttaaggaacctgaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039350-exon-sc0002081-1491911889:1883..1932 | TCONS_00039350-exon-sc0002081-1491911889:1883..1932 | Clytia hemisphaerica | exon |
| TCONS_00039350-exon-sc0002081-1510915933:1883..1932 | TCONS_00039350-exon-sc0002081-1510915933:1883..1932 | Clytia hemisphaerica | exon |
| TCONS_00039350-exon-sc0002081-1575043694:1883..1932 | TCONS_00039350-exon-sc0002081-1575043694:1883..1932 | Clytia hemisphaerica | exon |
| TCONS_00039350-exon-sc0002081-1491911889:2251..2909 | TCONS_00039350-exon-sc0002081-1491911889:2251..2909 | Clytia hemisphaerica | exon |
| TCONS_00039350-exon-sc0002081-1510915933:2251..2909 | TCONS_00039350-exon-sc0002081-1510915933:2251..2909 | Clytia hemisphaerica | exon |
| TCONS_00039350-exon-sc0002081-1575043694:2251..2909 | TCONS_00039350-exon-sc0002081-1575043694:2251..2909 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002081 | supercontig | sc0002081:1883..2909 + |
Blast
The following BLAST results are available for this feature:
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