TCONS_00039318 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039318
Unique NameTCONS_00039318
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length109

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039318 ID=TCONS_00039318|Name=TCONS_00039318|organism=Clytia hemisphaerica|type=transcript|length=109bp
tatttttcgtATTTTGTAGGTATAATTTTTACGTCTAAGTTTTCCCCAAC
ATTTGATATCCGAAACTTATATCTATCATATAAACAAATATATAGCTATG
GGAAAAAAC
Run BLAST on NCBI

transcript from alignment at sc0002072:15221..15329

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039318 ID=TCONS_00039318|Name=TCONS_00039318|organism=Clytia hemisphaerica|type=transcript|length=109bp|location=Sequence derived from alignment at sc0002072:15221..15329 (Clytia hemisphaerica)
GTTTTTTCCCATAGCTATATATTTGTTTATATGATAGATATAAGTTTCGG
ATATCAAATGTTGGGGAAAACTTAGACGTAAAAATTATACCTACAAAATa
cgaaaaata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023698XLOC_023698Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039318-exon-sc0002072-1491911889:15221..15329TCONS_00039318-exon-sc0002072-1491911889:15221..15329Clytia hemisphaericaexon
TCONS_00039318-exon-sc0002072-1510915933:15221..15329TCONS_00039318-exon-sc0002072-1510915933:15221..15329Clytia hemisphaericaexon
TCONS_00039318-exon-sc0002072-1575043694:15221..15329TCONS_00039318-exon-sc0002072-1575043694:15221..15329Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002072supercontigsc0002072:15221..15329 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039318 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top