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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039310 ID=TCONS_00039310|Name=TCONS_00039310|organism=Clytia hemisphaerica|type=transcript|length=1136bp
GAAAAGAACGATACTGTATCCTTATTACGTGATTTAAAGTGACGTGACCT
AAGCTAAGAGGTTAGACTTTATTCAACTCTCCAATGATCGTGCTTGTTTT
ATGTGACGAtccattttttcacaagtttgtttTTGAAAGCATGGTGCTAA
TGGAGAAAGTCCACGGAATGAAAATATCTTTTTGATTAGAAACTATGTTT
AGGACTTAAGCAAACCTCCCATAAGAACGAGACTGAGTCTGAGAGTCTGA
CTGGTATACAATTTAGGATACCTTTGAAACCTTAGGTGTGTAGACTCTAG
ACGCAAGGGTATACCTTGGATTTCATGTCGatatttctaattttcaaaGC
TCGCTCTTAAGAATTCTTTAGATTTTAAATCACATCATTTTTTGACAGTT
CTTACAGCGAATTTTCGTTGTAAAAGTTACGTGACAAAATATGGCTTACC
AtaaaattctaaatattttttagtaGTATCATAATATagtattttttttg
cttttcaaaATGTAAAACACAGATTCTGTCTAAATGAAATCCTTTATAAT
TTTAAGCTGACGTACGTGACGCAACAGGTCCATAGCTTGACGTTTATAGT
GATCTTTTTAATGTTCATCAAACGTACAAAATGGAACGTTTTGTGCATGG
TGTACACTTAAAAAGTCTTAGTCAGGAAAgccaaaattttatttataaag
cCGACCTGTTAGATATTTTAAGgctgatttgatttgatttatgaaaaaaa
acatgtttttatctgaattaaaaatctaaaattgctGTATTTTTAGCTCT
GTATAGATTTAAAGAGTACTTCTCTTAAGTAAATCAATTTTGCGGCTAGG
ATTGAACTTCGAACGTCAATGAAAATCAGGGCGaagatttttaaagtaaa
atttaattTCGAACTAATGAGCAATTCATGTGGGGAAAAGGCATACAATT
ACCTGTGCTTTACGTCCTAAATAAAGTTTATCTACTGCTCATATCTATCA
GAAAAATATGCGAtaagctttttgataatttttgttgttttcaagtGAAG
TTTGTAGATTGCTCATTAATTTCGATCGAGCCTTTACGTAAGACGTTTTT
TTGCTTTGAGGAAGAATATCTCTGAAAAACCAAGCC Run BLAST on NCBI transcript from alignment at sc0002071:1638..2773 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039310 ID=TCONS_00039310|Name=TCONS_00039310|organism=Clytia hemisphaerica|type=transcript|length=1136bp|location=Sequence derived from alignment at sc0002071:1638..2773 (Clytia hemisphaerica)
GGCTTGGTTTTTCAGAGATATTCTTCCTCAAAGCAAAAAAACGTCTTACG
TAAAGGCTCGATCGAAATTAATGAGCAATCTACAAACTTCacttgaaaac
aacaaaaattatcaaaaagcttaTCGCATATTTTTCTGATAGATATGAGC
AGTAGATAAACTTTATTTAGGACGTAAAGCACAGGTAATTGTATGCCTTT
TCCCCACATGAATTGCTCATTAGTTCGAaattaaattttactttaaaaat
cttCGCCCTGATTTTCATTGACGTTCGAAGTTCAATCCTAGCCGCAAAAT
TGATTTACTTAAGAGAAGTACTCTTTAAATCTATACAGAGCTAAAAATAC
agcaattttagatttttaattcagataaaaacatgttttttttcataaat
caaatcaaatcagcCTTAAAATATCTAACAGGTCGgctttataaataaaa
ttttggcTTTCCTGACTAAGACTTTTTAAGTGTACACCATGCACAAAACG
TTCCATTTTGTACGTTTGATGAACATTAAAAAGATCACTATAAACGTCAA
GCTATGGACCTGTTGCGTCACGTACGTCAGCTTAAAATTATAAAGGATTT
CATTTAGACAGAATCTGTGTTTTACATtttgaaaagcaaaaaaaatactA
TATTATGATACtactaaaaaatatttagaattttaTGGTAAGCCATATTT
TGTCACGTAACTTTTACAACGAAAATTCGCTGTAAGAACTGTCAAAAAAT
GATGTGATTTAAAATCTAAAGAATTCTTAAGAGCGAGCtttgaaaattag
aaatatCGACATGAAATCCAAGGTATACCCTTGCGTCTAGAGTCTACACA
CCTAAGGTTTCAAAGGTATCCTAAATTGTATACCAGTCAGACTCTCAGAC
TCAGTCTCGTTCTTATGGGAGGTTTGCTTAAGTCCTAAACATAGTTTCTA
ATCAAAAAGATATTTTCATTCCGTGGACTTTCTCCATTAGCACCATGCTT
TCAAaaacaaacttgtgaaaaaatggaTCGTCACATAAAACAAGCACGAT
CATTGGAGAGTTGAATAAAGTCTAACCTCTTAGCTTAGGTCACGTCACTT
TAAATCACGTAATAAGGATACAGTATCGTTCTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039310-exon-sc0002071-1491911889:1638..2773 | TCONS_00039310-exon-sc0002071-1491911889:1638..2773 | Clytia hemisphaerica | exon |
| TCONS_00039310-exon-sc0002071-1510915933:1638..2773 | TCONS_00039310-exon-sc0002071-1510915933:1638..2773 | Clytia hemisphaerica | exon |
| TCONS_00039310-exon-sc0002071-1575043694:1638..2773 | TCONS_00039310-exon-sc0002071-1575043694:1638..2773 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002071 | supercontig | sc0002071:1638..2773 . |
Blast
The following BLAST results are available for this feature:
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